Aliases for HIGD1AP13 Gene
Subcategory (RNA class) for HIGD1AP13 Gene
lncRNA
Aliases for HIGD1AP13 Gene
External Ids for HIGD1AP13 Gene
- HGNC: 43008
- Entrez Gene: 100874454
- Ensembl: ENSG00000251019
ORGUL Members for HIGD1AP13 Gene
Previous GeneCards Identifiers for HIGD1AP13 Gene
- GC04M079571
Summaries for HIGD1AP13 Gene
GeneCards Summary for HIGD1AP13 Gene
HIGD1AP13 (HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 13) is a Pseudogene, and is affiliated with the lncRNA class.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIGD1AP13 Gene
Genomics for HIGD1AP13 Gene
Regulatory Elements for HIGD1AP13 Gene
Enhancers for HIGD1AP13 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH04G078649 | 1.5 | Ensembl ENCODE dbSUPER | 0.7 | -1.6 | -1550 | 2.4 | PKNOX1 ARNT TCF12 ZNF766 GATA2 FOS ZHX2 NCOA1 ZNF592 MAFF | BMP2K RPS21P3 LINC01094 HIGD1AP13 GC04P078707 |
| GH04G078656 | 1.9 | FANTOM5 Ensembl ENCODE dbSUPER | 0.4 | -8.7 | -8650 | 4.2 | HDGF PKNOX1 ARNT SIN3A ZNF766 GATA2 FOS NCOA1 JUNB REST | ENSG00000200998 LINC01094 BMP2K HIGD1AP13 GC04P078707 |
| GH04G078691 | 2 | FANTOM5 Ensembl ENCODE dbSUPER | 0.3 | -43.9 | -43855 | 4.0 | HDGF PKNOX1 CREB3L1 ARNT ZNF766 CBX5 FOS KLF13 JUNB REST | BMP2K LINC00989 SERBP1P5 OR7E94P ENSG00000200998 RPS21P3 GC04P078707 HIGD1AP13 |
| GH04G078661 | 1.5 | Ensembl ENCODE dbSUPER | 0.4 | -12.9 | -12861 | 2.2 | FOXA2 MLX ARID4B YY1 CBX5 MIER2 TBX21 KAT8 MIER3 MAFF | ENSG00000200998 LINC01094 HIGD1AP13 GC04P078707 |
| GH04G078652 | 0.7 | Ensembl dbSUPER | 0.7 | -3.3 | -3251 | 0.6 | ZNF316 EMSY MAFK | HIGD1AP13 GC04P078707 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around HIGD1AP13 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for HIGD1AP13 Gene
- Chromosome:
- 4
- Start:
- 78,648,954 bp from pter
- End:
- 78,649,251 bp from pter
- Size:
- 298 bases
- Orientation:
- Minus strand
Genomic View for HIGD1AP13 Gene
Genes around HIGD1AP13 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 4q21.21 by Ensembl
- 4q21.21 by Entrez Gene
- 4q21.21 by HGNC
HIGD1AP13 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for HIGD1AP13 Gene
Proteins for HIGD1AP13 Gene
Post-translational modifications for HIGD1AP13 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for HIGD1AP13
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HIGD1AP13
- Origene Custom Protein Services for HIGD1AP13
- Search GeneTex for Proteins for HIGD1AP13
Assay Products
No data available for DME Specific Peptides for HIGD1AP13 Gene
Domains & Families for HIGD1AP13 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HIGD1AP13 Gene
Function for HIGD1AP13 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for HIGD1AP13
CRISPR Products
- Browse CRISPR knockouts for HIGD1AP13
miRNA Products
- Search ViGene Biosciences for HIGD1AP13
Inhibitory RNA Products
- Search ViGene Biosciences for HIGD1AP13
Cell Line Products
- Search ViGene Biosciences for HIGD1AP13
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIGD1AP13 Gene
Localization for HIGD1AP13 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HIGD1AP13 Gene
Transcripts for HIGD1AP13 Gene
mRNA/cDNA for HIGD1AP13 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for HIGD1AP13
miRNA Products
- Search ViGene Biosciences for HIGD1AP13
Inhibitory RNA Products
- Search ViGene Biosciences for HIGD1AP13
Flow Cytometry Products
Expression for HIGD1AP13 Gene
NURSA nuclear receptor signaling pathways regulating expression of HIGD1AP13 Gene:
HIGD1AP13
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HIGD1AP13 Gene
Orthologs for HIGD1AP13 Gene
No data available for Orthologs for HIGD1AP13 Gene
Paralogs for HIGD1AP13 Gene
No data available for Paralogs for HIGD1AP13 Gene
Variants for HIGD1AP13 Gene
Relevant External Links for HIGD1AP13 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- HIGD1AP13
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIGD1AP13 Gene
Disorders for HIGD1AP13 Gene
No disorders were found for HIGD1AP13 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIGD1AP13 Gene
Publications for HIGD1AP13 Gene
No publications were found for HIGD1AP13 Gene.
Products for HIGD1AP13 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HIGD1AP13
- Origene Custom Protein Services for HIGD1AP13
- Browse OriGene Inhibitory RNA Products For HIGD1AP13
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for HIGD1AP13
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For HIGD1AP13
- GenScript: Custom all cDNA clones Services for HIGD1AP13
- GenScript Custom Purified and Recombinant Proteins Services for HIGD1AP13
- GenScript Custom Assay Services for HIGD1AP13
- GenScript Custom overexpressing Cell Line Services for HIGD1AP13
- Browse GenScript CRISPR for HIGD1AP13
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for HIGD1AP13
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for HIGD1AP13
- VectorBuilder custom plasmid, inducible vectors for HIGD1AP13
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for HIGD1AP13
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for HIGD1AP13 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer