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Aliases for HIGD1AP13 Gene

Subcategory (RNA class) for HIGD1AP13 Gene

lncRNA

Aliases for HIGD1AP13 Gene

  • HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 13 2 3 5
  • HIG1 Hypoxia Inducible Domain Family, Member 1A Pseudogene 13 2

External Ids for HIGD1AP13 Gene

ORGUL Members for HIGD1AP13 Gene

Previous GeneCards Identifiers for HIGD1AP13 Gene

  • GC04M079571

Summaries for HIGD1AP13 Gene

GeneCards Summary for HIGD1AP13 Gene

HIGD1AP13 (HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 13) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for HIGD1AP13 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIGD1AP13 Gene

Genomics for HIGD1AP13 Gene

Regulatory Elements for HIGD1AP13 Gene

Enhancers for HIGD1AP13 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H078649 1.5 Ensembl ENCODE dbSUPER 0.7 -1.6 -1550 2 PKNOX1 ARNT TCF12 ZNF766 GATA2 FOS ATF7 NCOA1 ZNF592 MAFF BMP2K RPS21P3 LINC01094 HIGD1AP13 GC04P078707
GH04H078656 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -8.7 -8650 4 HDGF PKNOX1 ARNT ZNF766 GATA2 ATF7 RUNX3 NCOA1 JUNB REST ENSG00000200998 LINC01094 BMP2K HIGD1AP13 GC04P078707
GH04H078661 1.5 Ensembl ENCODE dbSUPER 0.4 -12.9 -12861 2 FOXA2 MLX ARID4B YY1 ATF7 RUNX3 REST MIER2 KAT8 NFIL3 ENSG00000200998 LINC01094 HIGD1AP13 GC04P078707
GH04H078691 2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -43.9 -43855 3 HDGF PKNOX1 ARNT ZNF766 CBX5 FOS REST SMARCB1 ZNF592 MEF2D BMP2K LINC00989 SERBP1P5 OR7E94P ENSG00000200998 RPS21P3 CNOT6L GC04P078707 HIGD1AP13
GH04H078652 0.7 Ensembl dbSUPER 0.7 -3.3 -3251 0 ZNF316 EMSY MAFK HIGD1AP13 GC04P078707
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HIGD1AP13 on UCSC Golden Path with GeneCards custom track

Genomic Location for HIGD1AP13 Gene

Chromosome:
4
Start:
78,648,954 bp from pter
End:
78,649,251 bp from pter
Size:
298 bases
Orientation:
Minus strand

Genomic View for HIGD1AP13 Gene

Genes around HIGD1AP13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HIGD1AP13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HIGD1AP13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HIGD1AP13 Gene

Proteins for HIGD1AP13 Gene

Post-translational modifications for HIGD1AP13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIGD1AP13 Gene

Domains & Families for HIGD1AP13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HIGD1AP13 Gene

Function for HIGD1AP13 Gene

Phenotypes From GWAS Catalog for HIGD1AP13 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HIGD1AP13
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIGD1AP13 Gene

Localization for HIGD1AP13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HIGD1AP13 Gene

Pathways & Interactions for HIGD1AP13 Gene

SuperPathways for HIGD1AP13 Gene

No Data Available

Interacting Proteins for HIGD1AP13 Gene

Gene Ontology (GO) - Biological Process for HIGD1AP13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HIGD1AP13 Gene

Drugs & Compounds for HIGD1AP13 Gene

No Compound Related Data Available

Transcripts for HIGD1AP13 Gene

mRNA/cDNA for HIGD1AP13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HIGD1AP13
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for HIGD1AP13 Gene

No ASD Table

Relevant External Links for HIGD1AP13 Gene

GeneLoc Exon Structure for
HIGD1AP13
ECgene alternative splicing isoforms for
HIGD1AP13

Expression for HIGD1AP13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HIGD1AP13 Gene

NURSA nuclear receptor signaling pathways regulating expression of HIGD1AP13 Gene:

HIGD1AP13
genes like me logo Genes that share expression patterns with HIGD1AP13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HIGD1AP13 Gene

Orthologs for HIGD1AP13 Gene

Evolution for HIGD1AP13 Gene

ENSEMBL:
Gene Tree for HIGD1AP13 (if available)
TreeFam:
Gene Tree for HIGD1AP13 (if available)

No data available for Orthologs for HIGD1AP13 Gene

Paralogs for HIGD1AP13 Gene

No data available for Paralogs for HIGD1AP13 Gene

Variants for HIGD1AP13 Gene

Relevant External Links for HIGD1AP13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HIGD1AP13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIGD1AP13 Gene

Disorders for HIGD1AP13 Gene

No disorders were found for HIGD1AP13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIGD1AP13 Gene

Publications for HIGD1AP13 Gene

No publications were found for HIGD1AP13 Gene.

Products for HIGD1AP13 Gene

Sources for HIGD1AP13 Gene

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