Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HIGD1AP12 Gene

Subcategory (RNA class) for HIGD1AP12 Gene

lncRNA

Aliases for HIGD1AP12 Gene

  • HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 12 2 3 5
  • HIG1 Hypoxia Inducible Domain Family, Member 1A Pseudogene 12 2

External Ids for HIGD1AP12 Gene

ORGUL Members for HIGD1AP12 Gene

Previous GeneCards Identifiers for HIGD1AP12 Gene

  • GC01P111918

Summaries for HIGD1AP12 Gene

GeneCards Summary for HIGD1AP12 Gene

HIGD1AP12 (HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 12) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIGD1AP12 Gene

Genomics for HIGD1AP12 Gene

Regulatory Elements for HIGD1AP12 Gene

Enhancers for HIGD1AP12 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F111185 1.8 FANTOM5 Ensembl ENCODE 16.2 -184.5 -184534 21.3 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 DRAM2 KCND3-AS1 CEPT1 HIGD1AP12 NRBF2P3 CHI3L2 ENSG00000243960 DDX20 ENSG00000273373 DENND2D
GH01F111731 1.7 FANTOM5 Ensembl ENCODE 16.2 +356.1 356084 9.1 PKNOX1 CREB3L1 MLX ZFP64 ARID4B FEZF1 DMAP1 ZNF2 SLC30A9 FOS KCND3-AS1 FAM212B-AS1 HIGD1AP12 NRBF2P3 LOC105378910 DDX20 RAP1A FAM212B C1orf162 GC01M111722
GH01F110645 1.6 FANTOM5 Ensembl ENCODE 16.2 -732.9 -732867 4.4 FEZF1 ZNF2 FOS SP3 JUNB REST TSHZ1 ZNF488 ZNF518A ZNF264 NRBF2P3 ENSG00000235005 HIGD1AP12 KCNA3 CD53 ENSG00000258634 CEPT1 ENSG00000243960 DRAM2 LRIF1
GH01F111445 1.2 ENCODE 16.3 +68.0 68017 4.9 HDGF PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF143 ENSG00000260948 KCND3-AS1 OVGP1 HIGD1AP12 NRBF2P3 DDX20 KRT18P57 RNU6-151P ENSG00000243960 UBE2FP3
GH01F111990 1 ENCODE 16.2 +611.0 610952 2.3 HDGF PKNOX1 ZNF133 SIN3A GLI4 ZNF2 YY1 GLIS2 ELK1 ZNF207 KCND3-AS1 HIGD1AP12 LOC105378910 LINC01750 ENSG00000243960 LOC105378906
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HIGD1AP12 on UCSC Golden Path with GeneCards custom track

Genomic Location for HIGD1AP12 Gene

Chromosome:
1
Start:
111,380,270 bp from pter
End:
111,380,571 bp from pter
Size:
302 bases
Orientation:
Plus strand

Genomic View for HIGD1AP12 Gene

Genes around HIGD1AP12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HIGD1AP12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HIGD1AP12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HIGD1AP12 Gene

Proteins for HIGD1AP12 Gene

Post-translational modifications for HIGD1AP12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIGD1AP12 Gene

Domains & Families for HIGD1AP12 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HIGD1AP12 Gene

Function for HIGD1AP12 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIGD1AP12 Gene

Localization for HIGD1AP12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HIGD1AP12 Gene

Pathways & Interactions for HIGD1AP12 Gene

SuperPathways for HIGD1AP12 Gene

No Data Available

Interacting Proteins for HIGD1AP12 Gene

Gene Ontology (GO) - Biological Process for HIGD1AP12 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HIGD1AP12 Gene

Transcripts for HIGD1AP12 Gene

mRNA/cDNA for HIGD1AP12 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HIGD1AP12 Gene

No ASD Table

Relevant External Links for HIGD1AP12 Gene

GeneLoc Exon Structure for
HIGD1AP12
ECgene alternative splicing isoforms for
HIGD1AP12

Expression for HIGD1AP12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HIGD1AP12 Gene

NURSA nuclear receptor signaling pathways regulating expression of HIGD1AP12 Gene:

HIGD1AP12
genes like me logo Genes that share expression patterns with HIGD1AP12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HIGD1AP12 Gene

Orthologs for HIGD1AP12 Gene

Evolution for HIGD1AP12 Gene

ENSEMBL:
Gene Tree for HIGD1AP12 (if available)
TreeFam:
Gene Tree for HIGD1AP12 (if available)

No data available for Orthologs for HIGD1AP12 Gene

Paralogs for HIGD1AP12 Gene

No data available for Paralogs for HIGD1AP12 Gene

Variants for HIGD1AP12 Gene

Relevant External Links for HIGD1AP12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HIGD1AP12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIGD1AP12 Gene

Disorders for HIGD1AP12 Gene

No disorders were found for HIGD1AP12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIGD1AP12 Gene

Publications for HIGD1AP12 Gene

No publications were found for HIGD1AP12 Gene.

Products for HIGD1AP12 Gene

Sources for HIGD1AP12 Gene

Content
Loading form....