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HIGD1AP1 Gene(Pseudogene)

HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 1

GCID:
GC12P053141
GIFtS:
12
Genes Participants
UDN Logo

Aliases for HIGD1AP1 Gene

Aliases for HIGD1AP1 Gene

  • HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 1 2 3 5
  • HIG1 Hypoxia Inducible Domain Family, Member 1D, Pseudogene 2 3
  • HIG1 Hypoxia Inducible Domain Family, Member 1A Pseudogene 1 2
  • HIG1 Hypoxia Inducible Domain Family, Member 1D 2
  • HIG1 Domain Family, Member 1D 3
  • HIGD1DP 3
  • HIGD1D 3
  • HIG1 3

External Ids for HIGD1AP1 Gene

Previous HGNC Symbols for HIGD1AP1 Gene

  • HIGD1D
  • HIGD1DP

Previous GeneCards Identifiers for HIGD1AP1 Gene

  • GC12P053544

Summaries for HIGD1AP1 Gene

GeneCards Summary for HIGD1AP1 Gene

HIGD1AP1 (HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIGD1AP1 Gene

Genomics for HIGD1AP1 Gene

Products:

  1. Regulatory Element

Genomic Location for HIGD1AP1 Gene

Chromosome:
12
Start:
53,141,960 bp from pter
End:
53,143,304 bp from pter
Size:
1,345 bases
Orientation:
Plus strand

Genomic View for HIGD1AP1 Gene

Genes around HIGD1AP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HIGD1AP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HIGD1AP1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HIGD1AP1 Gene

No data available for Regulatory Elements for HIGD1AP1 Gene

Proteins for HIGD1AP1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for HIGD1AP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIGD1AP1 Gene

Domains & Families for HIGD1AP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HIGD1AP1 Gene

Function for HIGD1AP1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIGD1AP1 Gene

Localization for HIGD1AP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HIGD1AP1 Gene

Pathways & Interactions for HIGD1AP1 Gene

SuperPathways for HIGD1AP1 Gene

PathCards logo More details on SuperPathways for HIGD1AP1
No Data Available

Interacting Proteins for HIGD1AP1 Gene

Gene Ontology (GO) - Biological Process for HIGD1AP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HIGD1AP1 Gene

Drugs & Compounds for HIGD1AP1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for HIGD1AP1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for HIGD1AP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HIGD1AP1 Gene

No ASD Table

Relevant External Links for HIGD1AP1 Gene

GeneLoc Exon Structure for
HIGD1AP1
ECgene alternative splicing isoforms for
HIGD1AP1

Expression for HIGD1AP1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HIGD1AP1 Gene

mRNA expression in normal human tissues for HIGD1AP1 Gene
mRNA expression by GTEx for HIGD1AP1 Gene

mRNA differential expression in normal tissues according to GTEx for HIGD1AP1 Gene

This gene is overexpressed in Heart - Left Ventricle (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of HIGD1AP1 Gene:

HIGD1AP1
genes like me logo Genes that share expression patterns with HIGD1AP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HIGD1AP1 Gene

Orthologs for HIGD1AP1 Gene

Evolution for HIGD1AP1 Gene

ENSEMBL:
Gene Tree for HIGD1AP1 (if available)
TreeFam:
Gene Tree for HIGD1AP1 (if available)

No data available for Orthologs for HIGD1AP1 Gene

Paralogs for HIGD1AP1 Gene

No data available for Paralogs for HIGD1AP1 Gene

Variants for HIGD1AP1 Gene

Relevant External Links for HIGD1AP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HIGD1AP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIGD1AP1 Gene

Disorders for HIGD1AP1 Gene

No disorders were found for HIGD1AP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIGD1AP1 Gene

Publications for HIGD1AP1 Gene

  1. A scan for positively selected genes in the genomes of humans and chimpanzees. (PMID: 15869325) Nielsen R. … Cargill M. (PLoS Biol. 2005) 3 64

Products for HIGD1AP1 Gene

Sources for HIGD1AP1 Gene

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