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Aliases for HIF1A-AS2 Gene

Subcategory (RNA class) for HIF1A-AS2 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for HIF1A-AS2 Gene

  • HIF1A Antisense RNA 2 2 3
  • HIF1A Antisense RNA 2 (Non-Protein Coding) 2 3
  • 3aHIF-1A 3
  • HIF1AAS2 6
  • AHIF 3

External Ids for HIF1A-AS2 Gene

ORGUL Members for HIF1A-AS2 Gene

Previous GeneCards Identifiers for HIF1A-AS2 Gene

  • GC14U901305
  • GC14M062183

Summaries for HIF1A-AS2 Gene

GeneCards Summary for HIF1A-AS2 Gene

HIF1A-AS2 (HIF1A Antisense RNA 2) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIF1A-AS2 Gene

Genomics for HIF1A-AS2 Gene

Genomic Location for HIF1A-AS2 Gene

Start:
61,715,558 bp from pter
End:
61,751,097 bp from pter
Size:
35,540 bases
Orientation:
Minus strand

Genomic View for HIF1A-AS2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HIF1A-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HIF1A-AS2 Gene

No data available for Regulatory Elements for HIF1A-AS2 Gene

Proteins for HIF1A-AS2 Gene

Post-translational modifications for HIF1A-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIF1A-AS2 Gene

Domains for HIF1A-AS2 Gene

Gene Families for HIF1A-AS2 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HIF1A-AS2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HIF1A-AS2 Gene

Function for HIF1A-AS2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for HIF1A-AS2 Gene

Localization for HIF1A-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HIF1A-AS2 Gene

Pathways for HIF1A-AS2 Gene

SuperPathways for HIF1A-AS2 Gene

No Data Available

Interacting Proteins for HIF1A-AS2 Gene

Gene Ontology (GO) - Biological Process for HIF1A-AS2 Gene

None

No data available for Pathways by source for HIF1A-AS2 Gene

Transcripts for HIF1A-AS2 Gene

mRNA/cDNA for HIF1A-AS2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HIF1A-AS2 Gene

No ASD Table

Relevant External Links for HIF1A-AS2 Gene

GeneLoc Exon Structure for
HIF1A-AS2
ECgene alternative splicing isoforms for
HIF1A-AS2

Expression for HIF1A-AS2 Gene

mRNA expression in normal human tissues for HIF1A-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for HIF1A-AS2 Gene

This gene is overexpressed in Heart - Atrial Appendage (9.0) and Heart - Left Ventricle (6.1).
genes like me logo Genes that share expressions with HIF1A-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for HIF1A-AS2 Gene

Orthologs for HIF1A-AS2 Gene

Evolution for HIF1A-AS2 Gene

ENSEMBL:
Gene Tree for HIF1A-AS2 (if available)
TreeFam:
Gene Tree for HIF1A-AS2 (if available)

No data available for Orthologs for HIF1A-AS2 Gene

Paralogs for HIF1A-AS2 Gene

No data available for Paralogs for HIF1A-AS2 Gene

Variants for HIF1A-AS2 Gene

Sequence variations from dbSNP and Humsavar for HIF1A-AS2 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs6573399 -- 61,749,007(+) GTCCT(G/T)TACCC nc-transcript-variant
rs12434730 -- 61,748,790(+) TACTG(C/T)GTTTT nc-transcript-variant
rs28418270 -- 61,749,289(+) CAAAA(C/G)AAAAA upstream-variant-2KB
rs58571054 -- 61,749,535(+) GCACC(A/G)TCACA upstream-variant-2KB
rs73317108 -- 61,749,165(+) GGGGG(C/G)CACAG upstream-variant-2KB

Relevant External Links for HIF1A-AS2 Gene

HapMap Linkage Disequilibrium report
HIF1A-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for HIF1A-AS2 Gene

Disorders for HIF1A-AS2 Gene

No disorders were found for HIF1A-AS2 Gene.

No data available for UniProtKB/Swiss-Prot for HIF1A-AS2 Gene

Publications for HIF1A-AS2 Gene

  1. Characterization of novel antisense HIF-1I+ transcripts in human cancers. (PMID: 21897117) Bertozzi D. … Capranico G. (Cell Cycle 2011) 2 3
  2. aHIF: a natural antisense transcript overexpressed in human renal cancer and during hypoxia. (PMID: 9923855) Thrash-Bingham C.A. … Tartof K.D. (J. Natl. Cancer Inst. 1999) 3
  3. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E. … Simpson A.J.G. (Proc. Natl. Acad. Sci. U.S.A. 2000) 3
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for HIF1A-AS2 Gene

Sources for HIF1A-AS2 Gene

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