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Aliases for HIF1A-AS2 Gene

Subcategory (RNA class) for HIF1A-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for HIF1A-AS2 Gene

  • HIF1A Antisense RNA 2 2 3 5
  • HIF1A Antisense RNA 2 (Non-Protein Coding) 2 3
  • 3aHIF-1A 3
  • AHIF 3

External Ids for HIF1A-AS2 Gene

Previous GeneCards Identifiers for HIF1A-AS2 Gene

  • GC14U901305
  • GC14M062183

Summaries for HIF1A-AS2 Gene

GeneCards Summary for HIF1A-AS2 Gene

HIF1A-AS2 (HIF1A Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIF1A-AS2 Gene

Genomics for HIF1A-AS2 Gene

Regulatory Elements for HIF1A-AS2 Gene

Enhancers for HIF1A-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around HIF1A-AS2 on UCSC Golden Path with GeneCards custom track

Promoters for HIF1A-AS2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for HIF1A-AS2 Gene

61,715,558 bp from pter
61,751,097 bp from pter
35,540 bases
Minus strand

Genomic View for HIF1A-AS2 Gene

Genes around HIF1A-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HIF1A-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HIF1A-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HIF1A-AS2 Gene

Proteins for HIF1A-AS2 Gene

Post-translational modifications for HIF1A-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIF1A-AS2 Gene

Domains & Families for HIF1A-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HIF1A-AS2 Gene

Function for HIF1A-AS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIF1A-AS2 Gene

Localization for HIF1A-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HIF1A-AS2 Gene

Pathways & Interactions for HIF1A-AS2 Gene

SuperPathways for HIF1A-AS2 Gene

No Data Available

Interacting Proteins for HIF1A-AS2 Gene

Gene Ontology (GO) - Biological Process for HIF1A-AS2 Gene


No data available for Pathways by source and SIGNOR curated interactions for HIF1A-AS2 Gene

Drugs & Compounds for HIF1A-AS2 Gene

No Compound Related Data Available

Transcripts for HIF1A-AS2 Gene

mRNA/cDNA for HIF1A-AS2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HIF1A-AS2 Gene

No ASD Table

Relevant External Links for HIF1A-AS2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HIF1A-AS2 Gene

mRNA expression in normal human tissues for HIF1A-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for HIF1A-AS2 Gene

This gene is overexpressed in Heart - Atrial Appendage (x9.0) and Heart - Left Ventricle (x6.1).
genes like me logo Genes that share expression patterns with HIF1A-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HIF1A-AS2 Gene

Orthologs for HIF1A-AS2 Gene

Evolution for HIF1A-AS2 Gene

Gene Tree for HIF1A-AS2 (if available)
Gene Tree for HIF1A-AS2 (if available)

No data available for Orthologs for HIF1A-AS2 Gene

Paralogs for HIF1A-AS2 Gene

No data available for Paralogs for HIF1A-AS2 Gene

Variants for HIF1A-AS2 Gene

Structural Variations from Database of Genomic Variants (DGV) for HIF1A-AS2 Gene

Variant ID Type Subtype PubMed ID
nsv1300 CNV deletion 18451855

Relevant External Links for HIF1A-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for HIF1A-AS2 Gene

Disorders for HIF1A-AS2 Gene

Relevant External Links for HIF1A-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for HIF1A-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HIF1A-AS2 Gene

Publications for HIF1A-AS2 Gene

  1. Characterization of novel antisense HIF-1I+ transcripts in human cancers. (PMID: 21897117) Bertozzi D. … Capranico G. (Cell Cycle 2011) 2 3 65
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 65
  3. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E. … Simpson A.J.G. (Proc. Natl. Acad. Sci. U.S.A. 2000) 3 65
  4. aHIF: a natural antisense transcript overexpressed in human renal cancer and during hypoxia. (PMID: 9923855) Thrash-Bingham C.A. … Tartof K.D. (J. Natl. Cancer Inst. 1999) 3 65

Products for HIF1A-AS2 Gene

Sources for HIF1A-AS2 Gene

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