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Aliases for HIF1A-AS1 Gene

Subcategory (RNA class) for HIF1A-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for HIF1A-AS1 Gene

  • HIF1A Antisense RNA 1 2 3
  • HIF1A Antisense RNA 1 (Non-Protein Coding) 2 3
  • 5aHIF1alpha 3
  • 5aHIF-1A 3
  • HIF1AAS1 6

External Ids for HIF1A-AS1 Gene

ORGUL Members for HIF1A-AS1 Gene

Summaries for HIF1A-AS1 Gene

GeneCards Summary for HIF1A-AS1 Gene

HIF1A-AS1 (HIF1A Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIF1A-AS1 Gene

Genomics for HIF1A-AS1 Gene

Genomic Location for HIF1A-AS1 Gene

Start:
61,681,041 bp from pter
End:
61,695,823 bp from pter
Size:
14,783 bases
Orientation:
Minus strand

Genomic View for HIF1A-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HIF1A-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HIF1A-AS1 Gene

No data available for Regulatory Elements for HIF1A-AS1 Gene

Proteins for HIF1A-AS1 Gene

Post-translational modifications for HIF1A-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIF1A-AS1 Gene

Domains for HIF1A-AS1 Gene

Gene Families for HIF1A-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with HIF1A-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for HIF1A-AS1 Gene

Function for HIF1A-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for HIF1A-AS1 Gene

Localization for HIF1A-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for HIF1A-AS1 Gene

Pathways for HIF1A-AS1 Gene

SuperPathways for HIF1A-AS1 Gene

No Data Available

Interacting Proteins for HIF1A-AS1 Gene

Gene Ontology (GO) - Biological Process for HIF1A-AS1 Gene

None

No data available for Pathways by source for HIF1A-AS1 Gene

Transcripts for HIF1A-AS1 Gene

mRNA/cDNA for HIF1A-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HIF1A-AS1 Gene

No ASD Table

Relevant External Links for HIF1A-AS1 Gene

GeneLoc Exon Structure for
HIF1A-AS1
ECgene alternative splicing isoforms for
HIF1A-AS1

Expression for HIF1A-AS1 Gene

mRNA expression in normal human tissues for HIF1A-AS1 Gene

genes like me logo Genes that share expressions with HIF1A-AS1: view

Orthologs for HIF1A-AS1 Gene

Evolution for HIF1A-AS1 Gene

ENSEMBL:
Gene Tree for HIF1A-AS1 (if available)
TreeFam:
Gene Tree for HIF1A-AS1 (if available)

No data available for Orthologs for HIF1A-AS1 Gene

Paralogs for HIF1A-AS1 Gene

No data available for Paralogs for HIF1A-AS1 Gene

Variants for HIF1A-AS1 Gene

Sequence variations from dbSNP and Humsavar for HIF1A-AS1 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs1535679 -- 61,693,050(+) ATTCA(A/C)AAATT intron-variant
rs2146871 -- 61,686,905(+) tagat(A/G)cagca intron-variant
rs2246241 -- 61,681,707(+) AATAA(C/G)TCATT intron-variant
rs2246254 -- 61,682,071(+) CAGTT(C/G)AAGAA intron-variant
rs2246259 -- 61,682,190(+) AGGAC(C/T)AGAAA intron-variant

Relevant External Links for HIF1A-AS1 Gene

HapMap Linkage Disequilibrium report
HIF1A-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for HIF1A-AS1 Gene

Disorders for HIF1A-AS1 Gene

No disorders were found for HIF1A-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for HIF1A-AS1 Gene

Publications for HIF1A-AS1 Gene

  1. Characterization of novel antisense HIF-1I+ transcripts in human cancers. (PMID: 21897117) Bertozzi D. … Capranico G. (Cell Cycle 2011) 2 3
  2. BRG1 expression is increased in thoracic aortic aneurysms and regulates proliferation and apoptosis of vascular smooth muscle cells through the long non-coding RNA HIF1A-AS1 in vitro. (PMID: 24875884) Wang S. … Xu Z. (Eur J Cardiothorac Surg 2015) 2 3
  3. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3
  4. DNA topoisomerase I inhibition by camptothecin induces escape of RNA polymerase II from promoter-proximal pause site, antisense transcription and histone acetylation at the human HIF-1alpha gene locus. (PMID: 19854946) Baranello L. … Capranico G. (Nucleic Acids Res. 2010) 3

Products for HIF1A-AS1 Gene

Sources for HIF1A-AS1 Gene

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