Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

HIC1 Gene

protein-coding   GIFtS: 56
GCID: GC17P001964

hypermethylated in cancer 1

 Explore 35 diseases affiliated with
HIC1 via our new
 Human Malady Compendium 
Biological research products
for HIC1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Hypermethylated In Cancer 11 2     Hic-13
ZBTB291 2 3     Hypermethylated In Cancer 1 Protein2
ZNF9011 2     Hic-13
Zinc Finger And BTB Domain-Containing Protein 292 3     

External Ids:    HGNC: 49091   Entrez Gene: 30902   Ensembl: ENSG000001773747   OMIM: 6038255   UniProtKB: Q145263   

Export aliases for HIC1 gene to outside databases

Previous GC identifers: GC17P002266 GC17P002300 GC17P001910 GC17P002166 GC17P001906 GC17P001905 GC17P001958


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for HIC1:
This gene functions as a growth regulatory and tumor repressor gene. Hypermethylation or deletion of the region of this
gene have been associated with tumors and the contiguous-gene syndrome, Miller-Dieker syndrome. Alternative splicing
of this gene results in multiple transcript variants. (provided by RefSeq, Sep 2010)

UniProtKB/Swiss-Prot: HIC1_HUMAN, Q14526
Function: Transcriptional repressor. Recognizes and binds to the consensus sequence '5-[CG]NG[CG]GGGCA[CA]CC-3'. May
act as a tumor suppressor. May be involved in development of head, face, limbs and ventral body wall. Involved in
down-regulation of SIRT1 and thereby is involved in regulation of p53/TP53-dependent apoptotic DNA-damage responses.
The specific target gene promoter association seems to be depend on corepressors, such as CTBP1 or CTBP2 and MTA1. The
regulation of SIRT1 transcription in response to nutrient deprivation seems to involve CTBP1. In cooperation with MTA1
(indicative for an association with the NuRD complex) represses transcription from CCND1/cyclin-D1 and CDKN1C/p57Kip2
specifically in quiescent cells. Involved in regulation of the Wnt signaling pathway probably by association with
TCF7L2 and preventing TCF7L2 and CTNNB1 association with promoters of TCF-responsive genes. Seems to repress
transcription from E2F1 and ATOH1 which involves ARID1A, indicative for the participation of a distinct SWI/SNF-type
chromatin-remodeling complex. Probably represses transcription from CXCR7, FGFBP1 and EFNA1

Gene Wiki entry for HIC1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000017.10  NC_018928.1  NT_010718.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the HIC1 gene promoter:
         Max   CP2   AP-2beta   AP-4   AP-2alpha   GATA-2   AP-2alphaA   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 3): HIC1 promoter sequence
   Search SABiosciences Chromatin IP Primers for HIC1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat HIC1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 17p13.3   Ensembl cytogenetic band:  17p13.3   HGNC cytogenetic band: 17p13.3

HIC1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
HIC1 gene location

GeneLoc information about chromosome 17         GeneLoc Exon Structure

GeneLoc location for GC17P001964:  view genomic region     (about GC identifiers)

Start:
1,957,448 bp from pter      End:
1,962,981 bp from pter
Size:
5,534 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: HIC1_HUMAN, Q14526 (See protein sequence)
Recommended Name: Hypermethylated in cancer 1 protein  
Size: 733 amino acids; 76508 Da
Subunit: Self-associates. Interacts with HIC2. Interacts with CTBP1 and CTBP2. Interacts with TCF7L2 and ARID1A.
Interacts with MTA1 and MBD3; indicative for an association with the NuRD complex
Subcellular location: Nucleus
Miscellaneous: The HIC1 gene is frequently found epigenetically silenced or deleted in different types of solid tumors
Secondary accessions: D3DTI4
Alternative splicing: 2 isoforms:  Q14526-1   Q14526-2   

Explore the universe of human proteins at neXtProt for HIC1: NX_Q14526

Post-translational modifications:

  • Acetylated on several residues, including Lys-333. Lys-333 is deacetylated by SIRT11
  • Sumoylated on Lys-333 by a PIAS family member, which enhances interaction with MTA1, positively regulates
  • transcriptional repression activity and is enhanced by HDAC41
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q14526

  • HIC1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_001091672.1  NP_006488.2  

    ENSEMBL proteins: 
     ENSP00000461476   ENSP00000460268   ENSP00000382742   ENSP00000467045   ENSP00000314080  

    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    Browse OriGene Protein Over-expression Lysates
    OriGene Custom Protein Services for HIC1 
    GenScript Custom Purified and Recombinant Proteins Services for HIC1
    Novus Biologicals HIC1 Protein
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for HIC1

    Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000785chromatin ISS--
    GO:0005634nucleus NAS--
    GO:0005730NOT nucleolus IDA--
    GO:0005737cytoplasm IDA--


    HIC1 for ontologies           About GeneDecksing



    HIC1 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for HIC1 
    GenScript Custom Superior Antibodies Services for HIC1
    Novus Biologicals HIC1 Antibodies
    Search for Antibodies for HIC1 at Abcam  
    Uscn Antibodies for HIC1
    Search ThermoFisher Antibodies for HIC1

    Assay Products for HIC1: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for HIC1
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for HIC1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    HIC1 for domains           About GeneDecksing

    5/6 InterPro domains/families (see all 6):
     IPR000210 BTB/POZ-like
     IPR015880 Znf_C2H2-like
     IPR011333 BTB/POZ_fold
     IPR013087 Znf_C2H2/integrase_DNA-bd
     IPR013069 BTB_POZ

    Graphical View of Domain Structure for InterPro Entry Q14526

    ProtoNet protein and cluster: Q14526

    2 Blocks protein families:
    IPB000210 BTB/POZ domain
    IPB007086 C2H2-type zinc finger signature


    UniProtKB/Swiss-Prot: HIC1_HUMAN, Q14526
    Domain: The BTB domain inhibits the binding to a single consensus binding site, but mediates cooperative binding to
    multiple binding sites
    Similarity: Belongs to the krueppel C2H2-type zinc-finger protein family. Hic subfamily
    Similarity: Contains 1 BTB (POZ) domain
    Similarity: Contains 5 C2H2-type zinc fingers


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: HIC1_HUMAN, Q14526
    Function: Transcriptional repressor. Recognizes and binds to the consensus sequence '5-[CG]NG[CG]GGGCA[CA]CC-3'. May
    act as a tumor suppressor. May be involved in development of head, face, limbs and ventral body wall. Involved in
    down-regulation of SIRT1 and thereby is involved in regulation of p53/TP53-dependent apoptotic DNA-damage responses.
    The specific target gene promoter association seems to be depend on corepressors, such as CTBP1 or CTBP2 and MTA1. The
    regulation of SIRT1 transcription in response to nutrient deprivation seems to involve CTBP1. In cooperation with MTA1
    (indicative for an association with the NuRD complex) represses transcription from CCND1/cyclin-D1 and CDKN1C/p57Kip2
    specifically in quiescent cells. Involved in regulation of the Wnt signaling pathway probably by association with
    TCF7L2 and preventing TCF7L2 and CTNNB1 association with promoters of TCF-responsive genes. Seems to repress
    transcription from E2F1 and ATOH1 which involves ARID1A, indicative for the participation of a distinct SWI/SNF-type
    chromatin-remodeling complex. Probably represses transcription from CXCR7, FGFBP1 and EFNA1

         Genatlas biochemistry entry for HIC1:
    zinc finger transcription factor gene,ubiquitously expressed in mesenchyme of the sclerotomes,lateral body wall,limb
    and craniofacial region,hypermethylated and underexpressed in tumor,deleted in the Miller-Dieker syndrome,putatively
    involved in the pathogenesis as suggested by the developmental defects observed in Hic1 deficient mice

    miRNA
    Products:
        
    OriGene 3'-UTR Clone (see all 2): HIC1
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat HIC1
    8/50 QIAGEN miScript miRNA Assays for microRNAs that regulate HIC1 (see all 50):
    hsa-miR-328 hsa-miR-300 hsa-let-7d hsa-miR-513a-5p hsa-miR-218-1* hsa-miR-128 hsa-miR-624 hsa-miR-374a*
    SwitchGear 3'UTR luciferase reporter plasmidHIC1 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for HIC1 (see all 7)
    OriGene shRNA RFP: HIC1
    OriGene siRNA: HIC1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat HIC1

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for HIC1

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for HIC1 (see all 5)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for HIC1 (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): HIC1 (NM_006497)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for HIC1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat HIC1 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for HIC1
    Search LifeMap BioReagents cell lines for HIC1

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HIC1

    Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003677DNA binding NAS--
    GO:0003700sequence-specific DNA binding transcription factor activity TAS7585125
    GO:0005515protein binding IPI19486893
    GO:0008270zinc ion binding IEA--
    GO:0042826histone deacetylase binding IDA12052894


    HIC1 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for HIC1:
     Increased ID2::GFP protein exp 

    Animal Models:
         Mouse knock-out Hic1tm1.2Kori for HIC1
         13 MGI mutant phenotypes (inferred from 4 alleles(MGI details for Hic1):
     craniofacial  digestive/alimentary  embryogenesis  growth/size  hearing/vestibular/ear 
     immune system  integument  limbs/digits/tail  mortality/aging  nervous system 
     normal  skeleton  tumorigenesis 

    HIC1 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Direct p53 effectors
    Direct p53 effectors1.00
    2E2F transcription factor network
    E2F transcription factor network1.00
    3Selected targets of p53
    Selected targets of p531.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for HIC1
        Selected targets of p53


    2 BioSystems Pathways for HIC1 
        Direct p53 effectors
    E2F transcription factor network



    HIC1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for HIC1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/31 Interacting proteins for HIC1 (Q145261, 2, 3 ENSP000003140804) via UniProtKB, MINT, STRING, and/or I2D (see all 31)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ARID1AO144971, 3, ENSP000003204854EBI-2507362,EBI-637887 I2D: score=2 STRING: ENSP00000320485
    TCF7L2Q9NQB02, 3, ENSP000003584044MINT-2730845 MINT-2730694 MINT-2730765 MINT-2730819 MINT-2730877 MINT-2730798 I2D: score=2 STRING: ENSP00000358404
    CTNNB1P352222, 3, ENSP000003444564MINT-2730948 MINT-2730906 I2D: score=1 STRING: ENSP00000344456
    CTBP1Q133631, 3, ENSP000002909214EBI-2507362,EBI-908846 I2D: score=2 STRING: ENSP00000290921
    CTBP2P565451, 3, ENSP000003118254EBI-2507362,EBI-741533 I2D: score=2 STRING: ENSP00000311825
    About this table

    Gene Ontology (GO): 5/8 biological process terms (GO ID links to tree view) (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000122negative regulation of transcription from RNA polymerase II promoter ISS--
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006355regulation of transcription, DNA-dependent TAS7585125
    GO:0007275multicellular organismal development NAS--
    GO:0008630intrinsic apoptotic signaling pathway in response to DNA damage IDA16269335


    HIC1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    HIC1 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for HIC1
    4 Novoseek chemical compound relationships for HIC1 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    5-aza-2'deoxycytidine 48.3 5 11747329 (1), 14656076 (1)
    zinc 14.1 3 9838134 (1), 19491197 (1), 16386221 (1)
    lysine 4.33 2 17283066 (2)
    cisplatin 0 2 17079468 (1), 15149548 (1)

    Search CenterWatch for drugs/clinical trials and news about HIC1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for HIC1 gene (2 alternative transcripts): 
    NM_001098202.1  NM_006497.3  

    Unigene Clusters for HIC1:

    Hypermethylated in cancer 1
    Hs.72956  [show with all ESTs], Hs.695682
    Unigene Representative Sequences: NM_006497, AJ583693
    6 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000574370 ENST00000571875 ENST00000571990 ENST00000399849(uc002fty.4 uc002ftz.4)
    ENST00000576444(uc021tnn.1) ENST00000322941(uc010cjy.3)

    miRNA
    Products:
         
    OriGene 3'-UTR Clone (see all 2): HIC1
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat HIC1
    8/50 QIAGEN miScript miRNA Assays for microRNAs that regulate HIC1 (see all 50):
    hsa-miR-328 hsa-miR-300 hsa-let-7d hsa-miR-513a-5p hsa-miR-218-1* hsa-miR-128 hsa-miR-624 hsa-miR-374a*
    SwitchGear 3'UTR luciferase reporter plasmidHIC1 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for HIC1 (see all 7)
    OriGene shRNA RFP: HIC1
    OriGene siRNA: HIC1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat HIC1
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for HIC1 (see all 5)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for HIC1 (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): HIC1 (NM_006497)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for HIC1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat HIC1 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for HIC1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat HIC1
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat HIC1
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat HIC1

    Additional cDNA sequence: 

    AJ583693.1 AJ583694.1 

    4 DOTS entries:

    DT.75183578  DT.97793647  DT.121010887  DT.95155546 

    23 AceView cDNA sequences:

    BI768757 AI478432 BG099265 BF515405 BX280170 AI523046 BC030208 NM_006497 
    BI822199 AJ583694 BU625650 AI391567 AA910862 AI073751 AJ583693 BF057013 
    AJ550616 BE464410 AW517436 BF940532 AA971486 AA991668 BF194704 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    HIC1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CGCCCCGGCG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See HIC1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for HIC1

    SOURCE GeneReport for Unigene clusters: Hs.72956 Hs.695682

    UniProtKB/Swiss-Prot: HIC1_HUMAN, Q14526
    Tissue specificity: Ubiquitously expressed with highest levels found in lung, colon, prostate, thymus, testis and
    ovary. Expression is absent or decreased in many tumor cells

        SABiosciences Expression via Pathway-Focused PCR Arrays including HIC1: 
              Oncogenes & Tumor Suppressor Genes in human mouse rat
              Leukemia in human mouse rat
              Breast Cancer in human mouse rat
              Lymphoma in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for HIC1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat HIC1
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat HIC1
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat HIC1
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HIC1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for HIC1 gene from 3/8 species (see all 8)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves HIC11 hypermethylated in cancer 1 76.38(n)
    74.2(a)
      396164  NM_205236.1  NP_990567.1 
    lizard
    (Anolis carolinensis)
    Reptilia HIC16
    --
    92(a)
    1 ↔ 1
    GL344562.1(19471-19812)
    zebrafish
    (Danio rerio)
    Actinopterygii hic11 hypermethylated in cancer 1 59.06(n)
    59.21(a)
      436585  NM_001002314.1  NP_001002314.1 


    ENSEMBL Gene Tree for HIC1 (if available)
    TreeFam Gene Tree for HIC1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for HIC1 gene
    ZBTB102  ZBTB32  ZBTB182  ZBTB8A2  ENSG000002545532  ZBTB442  ZBTB52  ZBTB492  
    ZBTB242  MYNN2  ZBTB422  HIC22  GZF12  ZBTB462  ZBTB8B2  ZBTB172  
    18/28 SIMAP similar genes for HIC1 using alignment to 6 protein entries:     HIC1_HUMAN (see all proteins) (see all similar genes):
    ZBTB7C    ZBTB20    ZBTB4    ZNF295    KLHL36    ZBTB49
    ZBTB38    ZBTB21    BACH2    ZBTB8B    ZBTB14    ZBTB3
    BACH1    BCL6    ZBTB25    KLHL28    NACC1    KLHL10

    HIC1 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/78 NCBI SNPs in HIC1 are shown (see all 78    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 17 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs739761891,2
    C,--1956677(+) AGAAGA/GACTCC 1 -- us2k12Minor allele frequency- G:0.06WA 120
    rs129530351,2
    C,F,H,--1956724(+) NNNNGA/GGCCTC 1 -- us2k117Minor allele frequency- G:0.04NS EA NA CSA 1988
    rs1818065321,2
    --1956819(+) AGACCC/GGCAGC 1 -- us2k10--------
    rs1484116421,2
    --1956929(+) CATGG-/GGCGGACTCAGG
    CAGCGGCGGGAATCA
    GGCGG
    1 -- us2k10--------
    rs1124912391,2
    C,--1957146(+) ACAGCG/ACGGGG 1 -- us2k11Minor allele frequency- A:0.50NA 2
    rs1135342251,2
    C,--1957173(+) GCTAAG/ACTCTC 1 -- us2k11Minor allele frequency- A:0.50WA 2
    rs1864992291,2
    --1957176(+) AAGCTC/TTCCAA 1 -- us2k10--------
    rs614537081,2
    --1957262(+) GCGGTA/GGAGGG 1 -- us2k10--------
    rs340414821,2
    C,F--1957305(+) GGGGAC/-CCCCC 1 -- us2k12Minor allele frequency- -:0.50NA 4
    rs352657361,2
    C--1957348(+) GTCAGG/AAGGTG 1 -- us2k11Minor allele frequency- A:0.50NA 2

    HapMap Linkage Disequilibrium report for HIC1 (1957448 - 1962981 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for HIC1
         1 CNV: 72769

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing HIC1
    DNA2.0 Custom Variant and Variant Library Synthesis for HIC1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    HIC1 for disorders           About GeneDecksing

    OMIM gene information: 603825    OMIM disorders: --

    20/35 diseases for HIC1 (see all 35):    About MalaCards
    miller-dieker syndrome    diffuse large b-cell lymphoma    b-cell lymphomas    germ cell tumor
    testicular germ cell tumor    male germ cell tumor    mantle cell lymphoma    bilateral breast cancer
    esophageal squamous cell carcinoma    squamous cell carcinoma    transitional cell carcinoma    malignant mesothelioma
    acute myeloid leukemia    fanconi's anemia    myeloid leukemia    lissencephaly
    medulloblastoma    hepatocellular carcinoma    ependymoma    breast cancer

    1 disease from the University of Copenhagen DISEASES database for HIC1:
    Cancer

    10/16 Novoseek disease relationships for HIC1 gene (see all 16)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    allelic loss 73.1 4 15837543 (2), 9572497 (1), 11073960 (1)
    medulloblastoma 68.2 13 18347096 (5), 14688019 (3), 14656076 (2), 15231840 (1) (see all 5)
    microsatellite instability 57.4 1 12773202 (1)
    cancer 54.8 49 11747329 (3), 9572497 (2), 17079468 (2), 19822477 (2) (see all 29)
    tumors 47.8 58 11299800 (5), 16386221 (5), 9572497 (3), 17982487 (3) (see all 30)
    hepatocellular carcinoma 23.1 4 19491197 (1), 10051471 (1), 16412291 (1)
    hepatitis chronic 20.2 1 10051471 (1)
    carcinoma squamous cell 19.9 3 11299800 (2), 11448914 (1)
    breast cancer 19 18 11747329 (5), 9572497 (4), 15251963 (1), 16641902 (1) (see all 5)
    cervical cancer 18.1 1 19755648 (1)

    Human Genome Epidemiology (HuGE) Navigator: HIC1 (4 documents)

    Export disorders for HIC1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for HIC1 gene, integrated from 9 sources (see all 93):
    (articles sorted by number of sources associating them with HIC1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. An acetylation/deacetylation-SUMOylation switch through a phylogenetically conserved psiKXEP motif in the tumor suppressor HIC1 regulates transcriptional repression activity. (PubMed id 17283066)1, 2, 9 Stankovic-Valentin N.... Leprince D. (2007)
    2. HIC1 attenuates Wnt signaling by recruitment of TCF-4 and beta-catenin to the nuclear bodies. (PubMed id 16724116)1, 2, 9 Valenta T....Korinek V. (2006)
    3. A L225A substitution in the human tumour suppressor HIC1 abolishes its interaction with the corepressor CtBP. (PubMed id 16762039)1, 2, 9 Stankovic-Valentin N....Leprince D. (2006)
    4. Scavenger chemokine (CXC motif) receptor 7 (CXCR7) is a direct target gene of HIC1 (hypermethylated in cancer 1). (PubMed id 19525223)1, 2, 9 Van Rechem C....Leprince D. (2009)
    5. Recruitment of SMRT/N-CoR-mSin3A-HDAC-repressing complexes is not a general mechanism for BTB/POZ transcriptional repressors: the case of HIC-1 and gammaFBP-B. (PubMed id 10611298)1, 2, 9 Deltour S....Leprince D. (1999)
    6. The tumor suppressor gene HIC1 (hypermethylated in cancer 1) is a sequence-specific transcriptional repressor: definition of its consensus binding sequence and analysis of its DNA binding and repressive properties. (PubMed id 15231840)1, 2, 9 Pinte S....Leprince D. (2004)
    7. Characterization of HRG22, a human homologue of the putative tumor suppressor gene HIC1. (PubMed id 11554746)1, 2, 9 Deltour S.... Leprince D. (2001)
    8. Metabolic regulation of SIRT1 transcription via a HIC1:CtBP corepressor complex. (PubMed id 17213307)1, 2, 9 Zhang Q....Goodman R.H. (2007)
    9. p53 activates expression of HIC-1, a new candidate tumour suppressor gene on 17p13.3. (PubMed id 7585125)1, 2, 9 Wales M.M.... Baylin S.B. (1995)
    10. Differential regulation of HIC1 target genes by CtBP and NuRD, via an acetylation/SUMOylation switch, in quiescent versus proliferat ing cells. (PubMed id 20547755)1, 2 Van Rechem C....Leprince D. (2010)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 3090 HGNC: 4909 AceView: HIC1 Ensembl:ENSG00000177374 euGenes: HUgn3090
    ECgene: HIC1 H-InvDB: HIC1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for HIC1 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for HIC1 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for HIC1 gene:
    Search GeneIP for patents involving HIC1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for HIC1  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for HIC1   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for HIC1  
     Browse OriGene Protein Over-expression Lysates   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for HIC1   OriGene 3'-UTR Clone for HIC1  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for HIC1   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for HIC1  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for HIC1   OriGene Custom Protein Services for HIC1  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat HIC1
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing HIC1
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat HIC1
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat HIC1
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat HIC1
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat HIC1
     GenScript Custom Purified and Recombinant Proteins Services for HIC1 GenScript cDNA clones with any tag delivered in your preferred vector for HIC1
     GenScript Custom Assay Services for HIC1 GenScript Custom Superior Antibodies Services for HIC1
     GenScript Custom overexpressing Cell Line Services for HIC1 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in HIC1 promoter
     Search Chromatin IP Primers for HIC1
     RT2 qPCR Primer Assay in human, mouse, rat HIC1
     GNC Network for HIC1
     SABiosciences PCR Arrays including human, mouse, rat HIC1
     Search Tocris compounds for HIC1
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     HIC1 antibodies
     HIC1 proteins
     Search for Antibodies for HIC1 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for HIC1
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     HIC1 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for HIC1
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HIC1
     SwitchGear 3'UTR luciferase reporter plasmids for HIC1
     SwitchGear Promoter luciferase reporter plasmids for HIC1
     Search ThermoFisher Antibodies for HIC1
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat HIC1
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      HIC1 gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 100 solr: 1.4