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Aliases for HHIP-AS1 Gene

Subcategory (RNA class) for HHIP-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for HHIP-AS1 Gene

  • HHIP Antisense RNA 1 2 3
  • HHIP Antisense RNA 1 (Non-Protein Coding) 2

External Ids for HHIP-AS1 Gene

ORGUL Members for HHIP-AS1 Gene

Summaries for HHIP-AS1 Gene

GeneCards Summary for HHIP-AS1 Gene

HHIP-AS1 (HHIP Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HHIP-AS1 Gene

Genomics for HHIP-AS1 Gene

Genomic Location for HHIP-AS1 Gene

Start:
144,642,916 bp from pter
End:
144,661,357 bp from pter
Size:
18,442 bases
Orientation:
Minus strand

Genomic View for HHIP-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HHIP-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HHIP-AS1 Gene

No data available for Regulatory Elements for HHIP-AS1 Gene

Proteins for HHIP-AS1 Gene

Post-translational modifications for HHIP-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HHIP-AS1 Gene

Domains for HHIP-AS1 Gene

Gene Families for HHIP-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with HHIP-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for HHIP-AS1 Gene

Function for HHIP-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for HHIP-AS1 Gene

Localization for HHIP-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for HHIP-AS1 Gene

Pathways for HHIP-AS1 Gene

SuperPathways for HHIP-AS1 Gene

No Data Available

Interacting Proteins for HHIP-AS1 Gene

Gene Ontology (GO) - Biological Process for HHIP-AS1 Gene

None

No data available for Pathways by source for HHIP-AS1 Gene

Transcripts for HHIP-AS1 Gene

mRNA/cDNA for HHIP-AS1 Gene

(2) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HHIP-AS1 Gene

HHIP antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HHIP-AS1 Gene

No ASD Table

Relevant External Links for HHIP-AS1 Gene

GeneLoc Exon Structure for
HHIP-AS1
ECgene alternative splicing isoforms for
HHIP-AS1

Expression for HHIP-AS1 Gene

mRNA expression in normal human tissues for HHIP-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for HHIP-AS1 Gene

This gene is overexpressed in Pancreas (4.1).

SOURCE GeneReport for Unigene cluster for HHIP-AS1 Gene Hs.632595

genes like me logo Genes that share expressions with HHIP-AS1: view

Orthologs for HHIP-AS1 Gene

Evolution for HHIP-AS1 Gene

ENSEMBL:
Gene Tree for HHIP-AS1 (if available)
TreeFam:
Gene Tree for HHIP-AS1 (if available)

No data available for Orthologs for HHIP-AS1 Gene

Paralogs for HHIP-AS1 Gene

No data available for Paralogs for HHIP-AS1 Gene

Variants for HHIP-AS1 Gene

Sequence variations from dbSNP and Humsavar for HHIP-AS1 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs7356356 -- 144,643,642(+) TTTAA(A/G)GTTTA nc-transcript-variant
rs7356360 -- 144,643,713(+) TTGTA(A/G)GCAAG nc-transcript-variant
rs7356363 -- 144,643,862(+) TTTCA(A/G)GACAA intron-variant
rs7680661 -- 144,643,964(+) GGGTC(A/G)TAGGT intron-variant
rs11730787 -- 144,643,393(+) CTGGA(A/G)AGGGT nc-transcript-variant

Relevant External Links for HHIP-AS1 Gene

HapMap Linkage Disequilibrium report
HHIP-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for HHIP-AS1 Gene

Disorders for HHIP-AS1 Gene

No disorders were found for HHIP-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for HHIP-AS1 Gene

Publications for HHIP-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. A genome-wide association study of pulmonary function measures in the Framingham Heart Study. (PMID: 19300500) Wilk J.B. … O'Connor G.T. (PLoS Genet. 2009) 3
  3. Genome-wide association study identifies five loci associated with lung function. (PMID: 20010834) Repapi E. … Tobin M.D. (Nat. Genet. 2010) 3
  4. Meta-analyses of genome-wide association studies identify multiple loci associated with pulmonary function. (PMID: 20010835) Hancock D.B. … London S.J. (Nat. Genet. 2010) 3
  5. Hundreds of variants clustered in genomic loci and biological pathways affect human height. (PMID: 20881960) Lango Allen H. … Hirschhorn J.N. (Nature 2010) 3

Products for HHIP-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate HHIP-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for HHIP-AS1
    • Block miRNA regulation of HHIP-AS1 using miScript Target Protectors

    Sources for HHIP-AS1 Gene

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