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Aliases & Descriptions for HGF
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases F-TCF 1 , 2 HGFB 1 , 2 HPTA 1 , 2 , 3 Hepatopoeitin-A 3 SF 1 , 2 , 3
Descriptions Scatter factor 2 , 3 fibroblast-derived tumor cytotoxic factor 2 hepatocyte growth factor 2 hepatocyte growth factor (hepapoietin A; scatter factor) 2 hepatopoietin A 2 lung fibroblast-derived mitogen 2
Search outside databases for aliases for HGF genePrevious GC identifers: GC07M079863 GC07M080926 GC07M080940 GC07M080943 GC07M080976
Summaries for HGF (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for HGF : Hepatocyte growth factor regulates cell growth, cell motility, and morphogenesis by activating atyrosine kinase signaling cascade after binding to the proto-oncogenic c-Met receptor. Hepatocytegrowth factor is secreted by mesenchymal cells and acts as a multi-functional cytokine on cells ofmainly epithelial origin. Its ability to stimulate mitogenesis, cell motility, and matrix invasiongives it a central role in angiogenesis, tumorogenesis, and tissue regeneration. It is secreted asa single inactive polypeptide and is cleaved by serine proteases into a 69-kDa alpha-chain and34-kDa beta-chain. A disulfide bond between the alpha and beta chains produces the active,heterodimeric molecule. The protein belongs to the plasminogen subfamily of S1 peptidases but hasno detectable protease activity. Alternative splicing of this gene produces multiple transcriptvariants encoding different isoforms. [provided by RefSeq] UniProtKB/Swiss-Prot: HGF_HUMAN, P14210 Function : HGF is a potent mitogen for mature parenchymal hepatocyte cells, seems to be anhepatotrophic factor, and acts as growth factor for a broad spectrum of tissues and cell types. Ithas no detectable protease activity
Gene Wiki entry for HGF (Hepatocyte_growth_factor)
Genomic Location for HGF
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the HGF gene Entrez Gene cytogenetic band: 7q21.1 Ensembl cytogenetic band: 7q21.11 HGNC cytogenetic band: 7q21.1 HGF Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 7 GeneLoc Exon Structure
GeneLoc location for GC07M081166:
(about GC identifiers )
Start:
81,169,274 bp from pter
End:
81,237,388 bp from pter
Size:
68,115 bases
Orientation:
minus strand
1 alternative location : Chr 7-,CRA_TCAG 80,663,506-80,731,238
RefSeq DNA sequence: NC_000007.12 NT_007933.14 NT_079595.2 Proteins for HGF
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: HGF_HUMAN, P14210 (See
protein sequence )Recommended Name: Hepatocyte growth factor precursor Size : 728 amino acids; 83134 Da
Subunit : Dimer of an alpha chain and a beta chain linked by a disulfide bond
PDB structures from and Proteopedia : 1BHT (3D)
 1GMN (3D)
 1GMO (3D)
 1GP9 (3D)
 1NK1 (3D)
 1SHY (3D)
 1SI5 (3D)
 2HGF (3D)
 2QJ2 (3D)
 
Secondary accessions : A1L3U6 Q02935 Q13494 Q14519 Q3KRB2 Q8TCE2 Q9BYL9 Q9BYM0 Q9UDU6Alternative splicing : 6 isoforms : P14210-1 P14210-2 P14210-3 P14210-4 P14210-5 P14210-6
REFSEQ proteins (5 alternative transcripts):
NP_000592.3 NP_001010931.1 NP_001010932.1 NP_001010933.1 NP_001010934.1 ENSEMBL proteins: ENSP00000378250 ENSP00000346164 ENSP00000222390 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for HGF: Assays for HGF:
Protein
Domains/ Families for HGF(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P14210 ProtoNet protein and cluster: P14210
5 Blocks protein families : IPB000001 Kringle IPB001254 Serine protease IPB001314 Chymotrypsin serine protease family (S1) signature IPB003014 N/apple PAN IPB003609 Apple-like UniProtKB/Swiss-Prot: HGF_HUMAN, P14210 Similarity : Belongs to the peptidase S1 family. Plasminogen subfamilySimilarity : Contains 4 kringle domainsSimilarity : Contains 1 PAN domainSimilarity : Contains 1 peptidase S1 domain
Gene Function for HGF
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 5 ): NM_000601 Applied Biosystems Silencer ® siRNAs for HGF Sigma-Aldrich siRNA and siRNA Panels for HGF Sigma-Aldrich shRNA Panels and shRNA for HGF Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 5 ): NM_000601                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 5 ): NM_000601                                  untagged cDNA clones in CMV expression vector (see all 5 ): NM_000601  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_000601 UniProtKB/Swiss-Prot: HGF_HUMAN, P14210 Function : HGF is a potent mitogen for mature parenchymal hepatocyte cells, seems to be anhepatotrophic factor, and acts as growth factor for a broad spectrum of tissues and cell types. Ithas no detectable protease activity
Genatlas biochemistry entry for HGF :hepatocyte growth factor,precursor of chains alpha and beta,expressed inplatelets,fibroblast,macrophage,endothelial and smooth muscle cells
6 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Hgf) :4 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for HGF
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5 Sigma-Aldrich "Your Favorite Gene" Pathways for HGF (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for HGF 5/125 Interacting proteins for HGF (ENSP00000222390 3 P14210 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 125
)About this table 5/9 Gene Ontology (GO) biological process terms (links to tree view) (see all 9
):
About this table
Drugs & Compounds for HGF (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Compounds for HGF available from Tocris Bioscience Compound Action
CAS
number PHA 665752 Potent and selective MET inhibitor [477575-56-7] K 252a Protein kinase inhibitor [99533-80-9]
About this table 10/43 Novoseek chemical compound relationships for HGF gene (see all 43
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
tyrosine
77.13
398
8601419 (4), 10644987 (4), 7475949 (4), 10521801 (3) (see all 99 )
matrigel
68.98
43
15333517 (2), 9624561 (2), 15042617 (2), 10496342 (2) (see all 30 )
phosphatidylinositol
55.14
20
10763917 (2), 10362361 (1), 10739674 (1), 12531429 (1) (see all 17 )
pd 98,059
53.31
13
11057428 (2), 10362361 (1), 14598883 (1), 15672871 (1) (see all 12 )
wortmannin
50.42
12
10362361 (1), 15781227 (1), 18579758 (1), 15452053 (1) (see all 9 )
tgf beta1
46.18
20
15646350 (3), 15580170 (2), 10222131 (2), 17626784 (2) (see all 11 )
hepaplastin
44.43
1
8680544 (1)
heparan sulfate
44.21
38
11435444 (5), 9428228 (2), 8157651 (2), 9777710 (1) (see all 15 )
anit
41.83
12
9548396 (2), 1427661 (2), 19040928 (1), 1446596 (1)
dimethylnitrosamine
39.96
21
18637143 (5), 9548396 (3), 9214455 (2), 9708531 (2) (see all 7 )
About this table
Transcripts for HGF(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
OriGene , Expression Assays from Applied Biosystems )About This Section
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 5 ): NM_000601 Sigma-Aldrich siRNA and siRNA Panels for HGF Sigma-Aldrich shRNA Panels and shRNA for HGF Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934
REFSEQ mRNAs for HGF gene (5 alternative transcripts): NM_000601.4 NM_001010931.1 NM_001010932.1 NM_001010933.1 NM_001010934.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 5 ): NM_000601                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 5 ): NM_000601                                  untagged cDNA clones in CMV expression vector (see all 5 ): NM_000601  
Additional cDNA sequence: AB208900.1 AK291674.1 AK313694.1 BC022308.1 BC063485.1 BC105797.1 BC130284.1 BC130286.1 CR593759.1 CR600867.1 L02931.1 M29145.1 M55379.1 M60718.1 M73239.1 M73240.1 M77227.1 U46010.1 X57574.1
6 DOTS entries : DT.314366 DT.75162211 DT.86846785 DT.100709074 DT.100738092 DT.121113589
24/85 AceView cDNA sequences (see all 85
):BU625850 CR600867 AJ713089 M55379 NM_000601 M73239 AL546558 M60718 AI206848 M29145 BM691444 BG572225 L02931 CN483847 CR593759 BE326846 BX497292 M77227 M73240 BU753481 BC022308 AA037738 CB961241 BX497293
highest scoring ESTs for HGF :M73239 AA037738 AL702032 AV759905 BC022308 BE244598 BG622782 BI915528 BU533235 BX503837
Unigene Cluster for HGF: Hepatocyte growth factor (hepapoietin A; scatter factor) Hs.396530 [show with all ESTs ] Unigene Representative Sequence: AK291674 GeneLoc Exon Structure 5 Alternative Splicing Database (ASD) splice patterns (SP) for HGF ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b · 6c ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 SP1 :                     -           SP2 :           -                     SP3 :                               SP4 :                               SP5 :                              
About this scheme ECgene alternative splicing isoforms for HGF 3 Ensembl transcripts including schematic representations : ENST00000394769
ENST00000354224
ENST00000222390
Expression for HGF
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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HGF expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for HGF 1 / 2 / 3
12 probe-sets matching HGF gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: CTGGCCCTTASOURCE GeneReport for Unigene cluster: Hs.396530 Expression variation in blood from EXPOLDB for HGF
Orthologs for HGF
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for HGF gene from 5/7 species (see all 7
)
About this table Species with no ortholog for HGF ENSEMBL Gene Tree for HGF Paralogs for HGF (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for HGF gene KREMEN1 2 LPA 2 KREMEN2 2 MST1 2 MSTP9 2 PLG 2
SNPs/Variants for HGF (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for HGF (up to first 250kb)
Disorders & Mutations for HGF
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 142409 10/96 Novoseek disease relationships for HGF gene (see all 96
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
arteriosclerosis retinal
69.31
7
9721534 (1), 9350587 (1), 10404823 (1), 9311255 (1)
tumors
64.53
717
10810432 (6), 16945480 (6), 7853418 (6), 9788258 (5) (see all 99 )
hepatocellular carcinoma
61.41
119
11211911 (6), 11264569 (5), 8778194 (4), 15359093 (4) (see all 61 )
metastasis
60.98
215
15492787 (4), 14598883 (3), 11118060 (3), 15221009 (3) (see all 99 )
renal fibrosis
60.39
27
14638904 (4), 15180923 (3), 11593360 (3), 16838037 (1) (see all 15 )
hepatic failure fulminant
59.97
34
2142004 (2), 9286233 (2), 10385651 (2), 1827762 (2) (see all 25 )
cancer
53.36
278
15607934 (5), 11477552 (4), 11328532 (3), 12631221 (3) (see all 99 )
arteriosclerosis obliterans
51.70
8
10373220 (2), 10429451 (1), 15238569 (1), 19225945 (1)
liver diseases
49.82
55
10220746 (4), 1833258 (3), 7806142 (2), 10594807 (2) (see all 33 )
proliferative diabetic retinopathy
48.76
26
10600653 (2), 16029908 (2), 11148602 (2), 9773744 (2) (see all 14 )
About this table Human Gene Mutation Database : HGF Genetic Association Database: HGF Human Genome Epidemiology Navigator: HGF (891 documents)
Medical News for HGF (Possibly Related Articles in
Doctor's Guide )
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Publications for HGF (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/1840 PubMed articles for HGF gene (see all 1840
): Identification of 21 single nucleotide polymorphisms in human hepatocyte growth factor gene and association with blood pressure and carotid atherosclerosis in the Japanese population. (PubMed id 15064106) 1, 3, 6 Takiuchi S....Tomoike H. (2004) Assignment of the hepatocyte growth factor (HGF) to chromosome 7q22-qter. (PubMed id 1837206) 1, 2, 3 Laguda B....Spurr N.K. (1991) Evidence for the identity of human scatter factor and human hepatocyte growth factor. (PubMed id 1831266) 1, 3, 4 Weidner K.M....Birchmeier W. (1991) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Association between hepatocyte growth factor gene polymorphism and essential hypertension. (PubMed id 15127882) 3, 6 Motone M....Ogihara T. (2004) Human chromosome 7: DNA sequence and biology. (PubMed id 12690205) 3, 4 Scherer S.W....Tsui L.C. (2003) A study to survey susceptible genetic factors responsible for troglitazone-associated hepatotoxicity in Japanese patients with type 2 diabetes mellitus. (PubMed id 12732844) 3, 6 Watanabe I....Koga T. (2003) The DNA sequence of human chromosome 7. (PubMed id 12853948) 3, 4 Hillier L.W.... Wilson R.K. (2003) Crystal structure of the NK1 fragment of human hepatocyte growth factor at 2.0-A resolution. (PubMed id 9817840) 3, 4 Ultsch M.... de Vos A.M. (1998) The solution structure of the N-terminal domain of hepatocyte growth factor reveals a potential heparin-binding site. (PubMed id 9493272) 3, 4 Zhou H.... Byrd R.A. (1998)
Search for HGF
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Genome Databases showing HGF
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing HGF
(According to HUGE )
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--
Specialized Databases showing HGF (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for HGF (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for HGF:
Recombinant Proteins (HGF ) Antibodies (HGF )
Tocris compounds for HGF
Antibodies for HGF
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009