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Aliases for HFE2 Gene

Aliases for HFE2 Gene

  • Hemochromatosis Type 2 (Juvenile) 2 3
  • HJV 3 4 6
  • Hemochromatosis Type 2 Protein 3 4
  • Repulsive Guidance Molecule C 2 3
  • RGM Domain Family Member C 3 4
  • HFE2A 3 6
  • RGMC 3 4
  • Haemojuvelin 3
  • Hemojuvelin 3
  • JH 3

External Ids for HFE2 Gene

Previous GeneCards Identifiers for HFE2 Gene

  • GC01U990224
  • GC01P143161
  • GC01P142902
  • GC01P144124
  • GC01P145413
  • GC01P119377

Summaries for HFE2 Gene

Entrez Gene Summary for HFE2 Gene

  • The product of this gene is involved in iron metabolism. It may be a component of the signaling pathway which activates hepcidin or it may act as a modulator of hepcidin expression. It could also represent the cellular receptor for hepcidin. Alternatively spliced transcript variants encoding different isoforms have been identified for this gene. Defects in this gene are the cause of hemochromatosis type 2A, also called juvenile hemochromatosis (JH). JH is an early-onset autosomal recessive disorder due to severe iron overload resulting in hypogonadotrophic hypogonadism, hepatic fibrosis or cirrhosis and cardiomyopathy, occurring typically before age of 30. [provided by RefSeq, Jul 2008]

GeneCards Summary for HFE2 Gene

HFE2 (Hemochromatosis Type 2 (Juvenile)) is a Protein Coding gene. Diseases associated with HFE2 include hemochromatosis, type 2a and hemochromatosis type 2. Among its related pathways are L1CAM interactions and L1CAM interactions. GO annotations related to this gene include coreceptor activity. An important paralog of this gene is RGMA.

UniProtKB/Swiss-Prot for HFE2 Gene

  • Acts as a bone morphogenetic protein (BMP) coreceptor. Through enhancement of BMP signaling regulates hepcidin (HAMP) expression and regulates iron homeostasis.

Gene Wiki entry for HFE2 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HFE2 Gene

Genomics for HFE2 Gene

Regulatory Elements for HFE2 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for HFE2 Gene

Start:
146,017,468 bp from pter
End:
146,021,918 bp from pter
Size:
4,451 bases
Orientation:
Minus strand

Genomic View for HFE2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HFE2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HFE2 Gene

Proteins for HFE2 Gene

  • Protein details for HFE2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZVN8-RGMC_HUMAN
    Recommended name:
    Hemojuvelin
    Protein Accession:
    Q6ZVN8
    Secondary Accessions:
    • B1ALI7
    • Q2PQ63
    • Q6IMF6
    • Q8NAH2
    • Q8WVJ5

    Protein attributes for HFE2 Gene

    Size:
    426 amino acids
    Molecular mass:
    45080 Da
    Quaternary structure:
    • Interacts with BMP2 and BMP4 (By similarity). Interacts with BMPR1B. Interacts with TMPRSS6.

    Alternative splice isoforms for HFE2 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for HFE2 Gene

Proteomics data for HFE2 Gene at MOPED

Post-translational modifications for HFE2 Gene

  • Autocatalytically cleaved at low pH; the two chains remain linked via two disulfide bonds. Also proteolytically processed by TMPRSS6, several fragments being released in the extracellular space; regulates HFE2 activity in BMP signaling and thefore iron homeostasis.
  • Glycosylation at Asn118, Asn213, and Asn372
  • Modification sites at PhosphoSitePlus

Other Protein References for HFE2 Gene

Antibody Products

  • R&D Systems Antibodies for HFE2 (RGM-C/Hemojuvelin)

No data available for DME Specific Peptides for HFE2 Gene

Domains for HFE2 Gene

Protein Domains for HFE2 Gene

Suggested Antigen Peptide Sequences for HFE2 Gene

Graphical View of Domain Structure for InterPro Entry

Q6ZVN8

UniProtKB/Swiss-Prot:

RGMC_HUMAN :
  • Q6ZVN8
Family:
  • Belongs to the repulsive guidance molecule (RGM) family.
genes like me logo Genes that share domains with HFE2: view

No data available for Gene Families for HFE2 Gene

Function for HFE2 Gene

Molecular function for HFE2 Gene

UniProtKB/Swiss-Prot Function:
Acts as a bone morphogenetic protein (BMP) coreceptor. Through enhancement of BMP signaling regulates hepcidin (HAMP) expression and regulates iron homeostasis.

Gene Ontology (GO) - Molecular Function for HFE2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 19357398
GO:0015026 coreceptor activity IBA --
genes like me logo Genes that share ontologies with HFE2: view
genes like me logo Genes that share phenotypes with HFE2: view

Animal Models for HFE2 Gene

MGI Knock Outs for HFE2:

Animal Model Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for HFE2

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , miRNA , Transcription Factor Targeting and HOMER Transcription for HFE2 Gene

Localization for HFE2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for HFE2 Gene

Cell membrane; Lipid-anchor, GPI-anchor. Note=Also released in the extracellular space. {ECO:0000269 PubMed:25156943}.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for HFE2 Gene COMPARTMENTS Subcellular localization image for HFE2 gene
Compartment Confidence
plasma membrane 5
extracellular 3
cytosol 1
nucleus 1

Gene Ontology (GO) - Cellular Components for HFE2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005615 extracellular space IDA 25156943
GO:0005886 plasma membrane IDA 16075058
GO:0009986 cell surface IEA --
GO:0031225 anchored component of membrane IEA --
genes like me logo Genes that share ontologies with HFE2: view

Pathways for HFE2 Gene

genes like me logo Genes that share pathways with HFE2: view

Pathways by source for HFE2 Gene

1 BioSystems pathway for HFE2 Gene
3 Reactome pathways for HFE2 Gene

Interacting Proteins for HFE2 Gene

Selected Interacting proteins: Q6ZVN8-RGMC_HUMAN for HFE2 Gene via I2D

Symbol External ID(s) Details
BMP6

Gene Ontology (GO) - Biological Process for HFE2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007411 axon guidance TAS --
GO:0030509 BMP signaling pathway IBA --
GO:0045944 positive regulation of transcription from RNA polymerase II promoter IEA --
GO:0055072 iron ion homeostasis IGI 16075058
genes like me logo Genes that share ontologies with HFE2: view

Compounds for HFE2 Gene

(1) HMDB Compounds for HFE2 Gene

Compound Synonyms Cas Number PubMed IDs
Iron
  • Armco iron
7439-89-6

(1) Novoseek inferred chemical compound relationships for HFE2 Gene

Compound -log(P) Hits PubMed IDs
iron 85 104
genes like me logo Genes that share compounds with HFE2: view

Transcripts for HFE2 Gene

Unigene Clusters for HFE2 Gene

Hemochromatosis type 2 (juvenile):
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for HFE2

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HFE2 Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3a · 3b · 3c ^ 4 ^ 5a · 5b
SP1:
SP2: -
SP3: - -
SP4: - - - - - -
SP5:

Relevant External Links for HFE2 Gene

GeneLoc Exon Structure for
HFE2
ECgene alternative splicing isoforms for
HFE2

Expression for HFE2 Gene

mRNA expression in normal human tissues for HFE2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for HFE2 Gene

This gene is overexpressed in Muscle - Skeletal (33.9), Liver (10.6), and Heart - Atrial Appendage (4.2).

Protein differential expression in normal tissues for HFE2 Gene

This gene is overexpressed in Colon muscle (61.0) and Breast (7.6).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for HFE2 Gene

SOURCE GeneReport for Unigene cluster for HFE2 Gene Hs.632436

mRNA Expression by UniProt/SwissProt for HFE2 Gene

Q6ZVN8-RGMC_HUMAN
Tissue specificity: Adult and fetal liver, heart, and skeletal muscle.
genes like me logo Genes that share expressions with HFE2: view

Expression partners for HFE2 Gene

In Situ Assay Products

Orthologs for HFE2 Gene

This gene was present in the common ancestor of animals.

Orthologs for HFE2 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia HFE2 35
  • 91.25 (n)
  • 92.67 (a)
HFE2 36
  • 91 (a)
OneToOne
dog
(Canis familiaris)
Mammalia HFE2 35
  • 90.5 (n)
  • 93.35 (a)
HFE2 36
  • 92 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Hfe2 35
  • 84.09 (n)
  • 88.01 (a)
Hfe2 16
Hfe2 36
  • 88 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia HFE2 35
  • 99.67 (n)
  • 99.5 (a)
HFE2 36
  • 99 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Hfe2 35
  • 84.44 (n)
  • 86.49 (a)
oppossum
(Monodelphis domestica)
Mammalia HFE2 36
  • 81 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia HFE2 36
  • 62 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 55 (a)
OneToMany
-- 36
  • 57 (a)
OneToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia hfe2 35
  • 62.1 (n)
  • 60.27 (a)
zebrafish
(Danio rerio)
Actinopterygii hfe2 35
  • 55.49 (n)
  • 50.74 (a)
hfe2 36
  • 44 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea drag-1 36
  • 22 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 39 (a)
OneToMany
Species with no ortholog for HFE2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for HFE2 Gene

ENSEMBL:
Gene Tree for HFE2 (if available)
TreeFam:
Gene Tree for HFE2 (if available)

Paralogs for HFE2 Gene

Paralogs for HFE2 Gene

Selected SIMAP similar genes for HFE2 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with HFE2: view

Variants for HFE2 Gene

Sequence variations from dbSNP and Humsavar for HFE2 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs863850 -- 146,023,711(-) GAGTG(C/T)TATGA upstream-variant-2KB
rs1830822 -- 146,023,449(-) aatat(A/G)aaagg upstream-variant-2KB
rs1830823 -- 146,023,433(-) ctggc(A/C)tagcc upstream-variant-2KB
rs1830824 -- 146,023,290(-) gtgat(C/T)gtgta upstream-variant-2KB
rs7540883 - 146,018,429(-) CTCAG(C/G)TGAAC reference, missense

Structural Variations from Database of Genomic Variants (DGV) for HFE2 Gene

Variant ID Type Subtype PubMed ID
nsv428212 CNV Gain 18775914
dgv104e1 CNV Complex 17122850
nsv7181 OTHER Inversion 18451855
dgv15n16 CNV Deletion 17901297
dgv46e201 CNV Deletion 23290073
nsv509457 CNV Insertion 20534489
dgv105e1 CNV Complex 17122850
dgv111e1 CNV Complex 17122850
esv2422428 CNV Duplication 17116639
nsv831359 CNV Loss 17160897
essv16633 CNV CNV 17122850
dgv112e1 CNV Complex 17122850
nsv2699 CNV Insertion 18451855
dgv346n71 CNV Gain 21882294
dgv347n71 CNV Gain 21882294
nsv831370 CNV Gain 17160897

Relevant External Links for HFE2 Gene

HapMap Linkage Disequilibrium report
HFE2
Human Gene Mutation Database (HGMD)
HFE2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for HFE2 Gene

Disorders for HFE2 Gene

(1) OMIM Diseases for HFE2 Gene (608374)

UniProtKB/Swiss-Prot

RGMC_HUMAN
  • Hemochromatosis 2A (HFE2A) [MIM:602390]: A juvenile form of hemochromatosis, a disorder of iron metabolism with excess deposition of iron in a variety of organs leading to their failure, bronze skin pigmentation, hepatic cirrhosis, arthropathy and diabetes. The most common symptoms of juvenile hemochromatosis at presentation are hypogonadism and cardiomyopathy. {ECO:0000269 PubMed:14647275, ECO:0000269 PubMed:14982867, ECO:0000269 PubMed:14982873, ECO:0000269 PubMed:15461631}. Note=The disease is caused by mutations affecting the gene represented in this entry.

(3) University of Copenhagen DISEASES for HFE2 Gene

(12) Novoseek inferred disease relationships for HFE2 Gene

Disease -log(P) Hits PubMed IDs
hemochromatosis, juvenile 98.5 36
iron overload 92.9 34
hemochromatosis 92.5 28
hereditary hemochromatosis 89.3 8
iron disorder 84.7 1

Relevant External Links for HFE2

GeneTests
HFE2
GeneReviews
HFE2
Genetic Association Database (GAD)
HFE2
Human Genome Epidemiology (HuGE) Navigator
HFE2
genes like me logo Genes that share disorders with HFE2: view

No data available for Genatlas for HFE2 Gene

Publications for HFE2 Gene

  1. Mutations in HFE2 cause iron overload in chromosome 1q-linked juvenile hemochromatosis. (PMID: 14647275) Papanikolaou G. … Goldberg Y.P. (Nat. Genet. 2004) 2 3 4 23
  2. Genetic abnormalities and juvenile hemochromatosis: mutations of the HJV gene encoding hemojuvelin. (PMID: 14982867) Lee P.L. … Barton J.C. (Blood 2004) 3 4 23
  3. Spectrum of hemojuvelin gene mutations in 1q-linked juvenile hemochromatosis. (PMID: 14982873) Lanzara C. … Camaschella C. (Blood 2004) 3 4 23
  4. The recently identified type 2A juvenile haemochromatosis gene (HJV), a second candidate modifier of the C282Y homozygous phenotype. (PMID: 15254010) Le Gac G. … FAcrec C. (Hum. Mol. Genet. 2004) 3 23 48
  5. Hemojuvelin (HJV) mutations in persons of European, African-American and Asian ancestry with adult onset haemochromatosis. (PMID: 15461631) Lee P.L. … Beutler E. (Br. J. Haematol. 2004) 3 4 23

Products for HFE2 Gene

Sources for HFE2 Gene

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