Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HEXDC-IT1 Gene

Subcategory (RNA class) for HEXDC-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for HEXDC-IT1 Gene

  • HEXDC Intronic Transcript 1 2 3 5
  • HEXDC Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for HEXDC-IT1 Gene

Previous GeneCards Identifiers for HEXDC-IT1 Gene

  • GC17P080385
  • GC17P080386
  • GC17P080388
  • GC17U902473

Summaries for HEXDC-IT1 Gene

GeneCards Summary for HEXDC-IT1 Gene

HEXDC-IT1 (HEXDC Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HEXDC-IT1 Gene

Genomics for HEXDC-IT1 Gene

Regulatory Elements for HEXDC-IT1 Gene

Enhancers for HEXDC-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G082438 1.2 Ensembl ENCODE dbSUPER 0.4 +15.0 15029 4.3 CTCF AGO1 MAX ZIC2 ZEB1 HIC1 GATA3 ZFHX2 POLR2A SCRT2 NARF TEX19 CSNK1D SECTM1 C17orf62 HEXDC-IT1
GH17G082424 0.6 ENCODE 0.7 -0.8 -759 0.2 CTCF TRIM22 RAD21 MXD3 ZNF341 ZNF143 SMC3 PRDM1 SPI1 C17orf62 TEX19 NARF UTS2R SECTM1 CSNK1D HEXDC-IT1 OGFOD3
GH17G082417 1 ENCODE 0.4 -6.4 -6379 2.7 ARNT CREB3L1 ARID4B SIN3A ZNF143 ZNF207 SP3 CEBPZ SP5 ZHX2 HEXDC OGFOD3 C17orf62 ENSG00000262049 TEX19 UTS2R NARF SECTM1 ENSG00000262663 CSNK1D
GH17G082448 1.3 ENCODE dbSUPER 0.3 +24.8 24834 3.2 HDGF MLX WRNIP1 ARID4B SIN3A SLC30A9 ZNF766 ZNF143 ZNF207 ZNF548 C17orf62 NARF ENSG00000262049 ENSG00000262663 ENSG00000262652 NARF-IT1 ARL2BPP9 OGFOD3 SECTM1 LOC101929650
GH17G082443 0.8 ENCODE dbSUPER 0.4 +18.3 18332 0.9 ZFHX2 ZNF585B POLR2A AGO1 KLF17 HNF4A NARF C17orf62 SECTM1 HEXDC-IT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HEXDC-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HEXDC-IT1 Gene

82,425,498 bp from pter
82,427,310 bp from pter
1,813 bases
Plus strand

Genomic View for HEXDC-IT1 Gene

Genes around HEXDC-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HEXDC-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HEXDC-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for HEXDC-IT1 Gene

Proteins for HEXDC-IT1 Gene

Post-translational modifications for HEXDC-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HEXDC-IT1 Gene

Domains & Families for HEXDC-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HEXDC-IT1 Gene

Function for HEXDC-IT1 Gene

Phenotypes for HEXDC-IT1 Gene

genes like me logo Genes that share phenotypes with HEXDC-IT1: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HEXDC-IT1 Gene

Localization for HEXDC-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HEXDC-IT1 Gene

Pathways & Interactions for HEXDC-IT1 Gene

SuperPathways for HEXDC-IT1 Gene

No Data Available

Interacting Proteins for HEXDC-IT1 Gene

Gene Ontology (GO) - Biological Process for HEXDC-IT1 Gene


No data available for Pathways by source and SIGNOR curated interactions for HEXDC-IT1 Gene

Drugs & Compounds for HEXDC-IT1 Gene

No Compound Related Data Available

Transcripts for HEXDC-IT1 Gene

mRNA/cDNA for HEXDC-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HEXDC-IT1 Gene

No ASD Table

Relevant External Links for HEXDC-IT1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HEXDC-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HEXDC-IT1 Gene

mRNA expression in normal human tissues for HEXDC-IT1 Gene

SOURCE GeneReport for Unigene cluster for HEXDC-IT1 Gene:

genes like me logo Genes that share expression patterns with HEXDC-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HEXDC-IT1 Gene

Orthologs for HEXDC-IT1 Gene

Evolution for HEXDC-IT1 Gene

Gene Tree for HEXDC-IT1 (if available)
Gene Tree for HEXDC-IT1 (if available)

No data available for Orthologs for HEXDC-IT1 Gene

Paralogs for HEXDC-IT1 Gene

No data available for Paralogs for HEXDC-IT1 Gene

Variants for HEXDC-IT1 Gene

Relevant External Links for HEXDC-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HEXDC-IT1 Gene

Disorders for HEXDC-IT1 Gene

Relevant External Links for HEXDC-IT1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for HEXDC-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HEXDC-IT1 Gene

Publications for HEXDC-IT1 Gene

No publications were found for HEXDC-IT1 Gene.

Products for HEXDC-IT1 Gene

Sources for HEXDC-IT1 Gene

Loading form....