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Aliases for HEXA-AS1 Gene

Subcategory (RNA class) for HEXA-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for HEXA-AS1 Gene

  • HEXA Antisense RNA 1 2 3 4
  • HEXA Antisense RNA 1 (Non-Protein Coding) 2 3
  • C15orf34 3 4
  • Chromosome 15 Open Reading Frame 34 2
  • HEXA Antisense Gene Protein 1 4

External Ids for HEXA-AS1 Gene

ORGUL Members for HEXA-AS1 Gene

Previous HGNC Symbols for HEXA-AS1 Gene

  • C15orf34

Previous GeneCards Identifiers for HEXA-AS1 Gene

  • GC15P072669

Summaries for HEXA-AS1 Gene

GeneCards Summary for HEXA-AS1 Gene

HEXA-AS1 (HEXA Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HEXA-AS1 Gene

Genomics for HEXA-AS1 Gene

Genomic Location for HEXA-AS1 Gene

Start:
72,376,113 bp from pter
End:
72,378,788 bp from pter
Size:
2,676 bases
Orientation:
Plus strand

Genomic View for HEXA-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HEXA-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HEXA-AS1 Gene

No data available for Regulatory Elements for HEXA-AS1 Gene

Proteins for HEXA-AS1 Gene

  • Protein details for HEXA-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H8Q6-HEAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by HEXA-AS1
    Protein Accession:
    Q9H8Q6
    Secondary Accessions:

    Protein attributes for HEXA-AS1 Gene

    Size:
    139 amino acids
    Molecular mass:
    16103 Da
    Quaternary structure:
    No Data Available

neXtProt entry for HEXA-AS1 Gene

Proteomics data for HEXA-AS1 Gene at MOPED

Post-translational modifications for HEXA-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HEXA-AS1 Gene

Domains for HEXA-AS1 Gene

Gene Families for HEXA-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for HEXA-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HEXA-AS1: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HEXA-AS1 Gene

Function for HEXA-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for HEXA-AS1 Gene

Localization for HEXA-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HEXA-AS1 Gene

Pathways for HEXA-AS1 Gene

SuperPathways for HEXA-AS1 Gene

No Data Available

Interacting Proteins for HEXA-AS1 Gene

Gene Ontology (GO) - Biological Process for HEXA-AS1 Gene

None

No data available for Pathways by source for HEXA-AS1 Gene

Transcripts for HEXA-AS1 Gene

mRNA/cDNA for HEXA-AS1 Gene

(3) Additional mRNA sequences :
(2) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HEXA-AS1 Gene

HEXA antisense RNA 1:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for HEXA-AS1

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for HEXA-AS1
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HEXA-AS1 Gene

No ASD Table

Relevant External Links for HEXA-AS1 Gene

GeneLoc Exon Structure for
HEXA-AS1
ECgene alternative splicing isoforms for
HEXA-AS1

Expression for HEXA-AS1 Gene

mRNA expression in normal human tissues for HEXA-AS1 Gene

SOURCE GeneReport for Unigene cluster for HEXA-AS1 Gene Hs.591113

genes like me logo Genes that share expressions with HEXA-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for HEXA-AS1 Gene

Orthologs for HEXA-AS1 Gene

Evolution for HEXA-AS1 Gene

ENSEMBL:
Gene Tree for HEXA-AS1 (if available)
TreeFam:
Gene Tree for HEXA-AS1 (if available)

No data available for Orthologs for HEXA-AS1 Gene

Paralogs for HEXA-AS1 Gene

No data available for Paralogs for HEXA-AS1 Gene

Variants for HEXA-AS1 Gene

Sequence variations from dbSNP and Humsavar for HEXA-AS1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs56104280 -- 72,378,753(+) GGTAT(A/G)GTAGC nc-transcript-variant
rs58871584 -- 72,379,162(+) GTTTT(-/T)CTTTT downstream-variant-500B
rs71397237 -- 72,379,137(+) AACAT(A/C)CTGTA downstream-variant-500B
rs77750213 -- 72,378,598(+) TATAA(A/C)TCAAA nc-transcript-variant
rs142796923 -- 72,379,042(+) AATGA(A/G)TAAAC downstream-variant-500B

Relevant External Links for HEXA-AS1 Gene

HapMap Linkage Disequilibrium report
HEXA-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for HEXA-AS1 Gene

Disorders for HEXA-AS1 Gene

No disorders were found for HEXA-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for HEXA-AS1 Gene

Publications for HEXA-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Analysis of the DNA sequence and duplication history of human chromosome 15. (PMID: 16572171) Zody M.C. … Nusbaum C. (Nature 2006) 4

Products for HEXA-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate HEXA-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for HEXA-AS1
    • Block miRNA regulation of HEXA-AS1 using miScript Target Protectors

    Sources for HEXA-AS1 Gene

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