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Aliases for HEXA-AS1 Gene

Subcategory (RNA class) for HEXA-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for HEXA-AS1 Gene

  • HEXA Antisense RNA 1 2 3 4 5
  • HEXA Antisense RNA 1 (Non-Protein Coding) 2 3
  • C15orf34 3 4
  • Chromosome 15 Open Reading Frame 34 2
  • HEXA Antisense Gene Protein 1 4

External Ids for HEXA-AS1 Gene

ORGUL Members for HEXA-AS1 Gene

Previous HGNC Symbols for HEXA-AS1 Gene

  • C15orf34

Previous GeneCards Identifiers for HEXA-AS1 Gene

  • GC15P072669

Summaries for HEXA-AS1 Gene

GeneCards Summary for HEXA-AS1 Gene

HEXA-AS1 (HEXA Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

Additional gene information for HEXA-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HEXA-AS1 Gene

Genomics for HEXA-AS1 Gene

GeneHancer (GH) Regulatory Elements for HEXA-AS1 Gene

Promoters and enhancers for HEXA-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I072374 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 550.8 +0.1 147 3.3 CLOCK MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF416 HEXA ENSG00000260729 HEXA-AS1 ENSG00000261187 MYO9A ARIH1 LOC105370887 TMEM202-AS1 BBS4 ADPGK
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HEXA-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HEXA-AS1 Gene

Genomic Locations for HEXA-AS1 Gene
chr15:72,376,113-72,378,788
(GRCh38/hg38)
Size:
2,676 bases
Orientation:
Plus strand
chr15:72,668,454-72,671,129
(GRCh37/hg19)

Genomic View for HEXA-AS1 Gene

Genes around HEXA-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HEXA-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HEXA-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HEXA-AS1 Gene

Proteins for HEXA-AS1 Gene

  • Protein details for HEXA-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H8Q6-HEAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by HEXA-AS1
    Protein Accession:
    Q9H8Q6

    Protein attributes for HEXA-AS1 Gene

    Size:
    139 amino acids
    Molecular mass:
    16103 Da
    Quaternary structure:
    No Data Available

neXtProt entry for HEXA-AS1 Gene

Post-translational modifications for HEXA-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HEXA-AS1 Gene

Domains & Families for HEXA-AS1 Gene

Protein Domains for HEXA-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HEXA-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HEXA-AS1 Gene

Function for HEXA-AS1 Gene

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HEXA-AS1 Gene

Localization for HEXA-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HEXA-AS1 Gene

Pathways & Interactions for HEXA-AS1 Gene

SuperPathways for HEXA-AS1 Gene

No Data Available

Interacting Proteins for HEXA-AS1 Gene

Gene Ontology (GO) - Biological Process for HEXA-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HEXA-AS1 Gene

Drugs & Compounds for HEXA-AS1 Gene

No Compound Related Data Available

Transcripts for HEXA-AS1 Gene

mRNA/cDNA for HEXA-AS1 Gene

(2) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HEXA-AS1 Gene

HEXA antisense RNA 1:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HEXA-AS1 Gene

No ASD Table

Relevant External Links for HEXA-AS1 Gene

GeneLoc Exon Structure for
HEXA-AS1
ECgene alternative splicing isoforms for
HEXA-AS1

Expression for HEXA-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HEXA-AS1 Gene

SOURCE GeneReport for Unigene cluster for HEXA-AS1 Gene:

Hs.591113
genes like me logo Genes that share expression patterns with HEXA-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HEXA-AS1 Gene

Orthologs for HEXA-AS1 Gene

Evolution for HEXA-AS1 Gene

ENSEMBL:
Gene Tree for HEXA-AS1 (if available)
TreeFam:
Gene Tree for HEXA-AS1 (if available)

No data available for Orthologs for HEXA-AS1 Gene

Paralogs for HEXA-AS1 Gene

No data available for Paralogs for HEXA-AS1 Gene

Variants for HEXA-AS1 Gene

Sequence variations from dbSNP and Humsavar for HEXA-AS1 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1012228669 uncertain-significance, Tay-Sachs disease 72,376,113(+) C/T non_coding_transcript_variant
rs1057516640 likely-pathogenic, Tay-Sachs disease 72,375,780(+) AGGCCTCGTCGAGG/AGG upstream_transcript_variant
rs1057516957 likely-pathogenic, Tay-Sachs disease 72,375,777(+) G/A upstream_transcript_variant
rs1057517296 likely-pathogenic, Tay-Sachs disease 72,375,912(+) TC/TCTC upstream_transcript_variant
rs1057517348 likely-pathogenic, Tay-Sachs disease 72,375,948(+) AAAA/AA upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for HEXA-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv469704 CNV loss 16826518
nsv521971 CNV gain 19592680
nsv984090 CNV duplication 23825009

Additional Variant Information for HEXA-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HEXA-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HEXA-AS1 Gene

Disorders for HEXA-AS1 Gene

Additional Disease Information for HEXA-AS1

No disorders were found for HEXA-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HEXA-AS1 Gene

Publications for HEXA-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 58
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 58
  4. Analysis of the DNA sequence and duplication history of human chromosome 15. (PMID: 16572171) Zody MC … Nusbaum C (Nature 2006) 4 58

Products for HEXA-AS1 Gene

Sources for HEXA-AS1 Gene

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