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HEXA-AS1 Gene(RNA Gene)

HEXA Antisense RNA 1

GCID:
GC15P072376
GIFtS:
23
Genes Participants
UDN Logo

Aliases for HEXA-AS1 Gene

Subcategory (RNA class) for HEXA-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for HEXA-AS1 Gene

  • HEXA Antisense RNA 1 2 3 4 5
  • HEXA Antisense RNA 1 (Non-Protein Coding) 2 3
  • C15orf34 3 4
  • Chromosome 15 Open Reading Frame 34 2
  • HEXA Antisense Gene Protein 1 4

External Ids for HEXA-AS1 Gene

ORGUL Members for HEXA-AS1 Gene

Previous HGNC Symbols for HEXA-AS1 Gene

  • C15orf34

Previous GeneCards Identifiers for HEXA-AS1 Gene

  • GC15P072669

Summaries for HEXA-AS1 Gene

GeneCards Summary for HEXA-AS1 Gene

HEXA-AS1 (HEXA Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HEXA-AS1 Gene

Genomics for HEXA-AS1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for HEXA-AS1 Gene

Enhancers for HEXA-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G072374 1.4 ENCODE dbSUPER 0.7 +0.2 235 3.1 MLX CREB3L1 AGO1 FEZF1 DMAP1 YY1 SLC30A9 ZNF416 SP3 NFYC ENSG00000261187 ARIH1 HEXA HEXA-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HEXA-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for HEXA-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000079038 -413 2201 MLX CREB3L1 AGO1 FEZF1 DMAP1 YY1 SLC30A9 ZNF416 SP3 NFYC

Genomic Location for HEXA-AS1 Gene

Chromosome:
15
Start:
72,376,113 bp from pter
End:
72,378,788 bp from pter
Size:
2,676 bases
Orientation:
Plus strand

Genomic View for HEXA-AS1 Gene

Genes around HEXA-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HEXA-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HEXA-AS1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HEXA-AS1 Gene

Proteins for HEXA-AS1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for HEXA-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H8Q6-HEAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by HEXA-AS1
    Protein Accession:
    Q9H8Q6

    Protein attributes for HEXA-AS1 Gene

    Size:
    139 amino acids
    Molecular mass:
    16103 Da
    Quaternary structure:
    No Data Available

neXtProt entry for HEXA-AS1 Gene

Post-translational modifications for HEXA-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HEXA-AS1 Gene

Domains & Families for HEXA-AS1 Gene

Protein Domains for HEXA-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HEXA-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HEXA-AS1 Gene

Function for HEXA-AS1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Inhibitory RNA Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HEXA-AS1 Gene

Localization for HEXA-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HEXA-AS1 Gene

Pathways & Interactions for HEXA-AS1 Gene

SuperPathways for HEXA-AS1 Gene

PathCards logo More details on SuperPathways for HEXA-AS1
No Data Available

Interacting Proteins for HEXA-AS1 Gene

Gene Ontology (GO) - Biological Process for HEXA-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HEXA-AS1 Gene

Drugs & Compounds for HEXA-AS1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for HEXA-AS1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for HEXA-AS1 Gene

(2) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HEXA-AS1 Gene

HEXA antisense RNA 1:
Representative Sequences:

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HEXA-AS1 Gene

No ASD Table

Relevant External Links for HEXA-AS1 Gene

GeneLoc Exon Structure for
HEXA-AS1
ECgene alternative splicing isoforms for
HEXA-AS1

Expression for HEXA-AS1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HEXA-AS1 Gene

mRNA expression in normal human tissues for HEXA-AS1 Gene
mRNA expression by BioGPS for HEXA-AS1 GenemRNA expression by GTEx for HEXA-AS1 Gene

SOURCE GeneReport for Unigene cluster for HEXA-AS1 Gene:

Hs.591113
genes like me logo Genes that share expression patterns with HEXA-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HEXA-AS1 Gene

Orthologs for HEXA-AS1 Gene

Evolution for HEXA-AS1 Gene

ENSEMBL:
Gene Tree for HEXA-AS1 (if available)
TreeFam:
Gene Tree for HEXA-AS1 (if available)

No data available for Orthologs for HEXA-AS1 Gene

Paralogs for HEXA-AS1 Gene

No data available for Paralogs for HEXA-AS1 Gene

Variants for HEXA-AS1 Gene

Sequence variations from dbSNP and Humsavar for HEXA-AS1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs121907964 Pathogenic 72,375,895(-) CCCTG(A/G)CCTCA nc-transcript-variant, upstream-variant-2KB, reference, stop-gained
rs121907965 Pathogenic 72,375,972(-) GGGCC(A/C/G)TGACA nc-transcript-variant, upstream-variant-2KB, reference, missense
rs121907979 Pathogenic 72,375,857(-) CGTCC(G/T)TTACC nc-transcript-variant, upstream-variant-2KB, reference, missense
rs387906949 Pathogenic 72,375,800(-) CGGCT(A/G/T)CTCAG nc-transcript-variant, upstream-variant-2KB, reference, missense
rs786204721 Pathogenic 72,375,971(-) GGCCA(C/T)GACAA nc-transcript-variant, upstream-variant-2KB, reference, missense

Structural Variations from Database of Genomic Variants (DGV) for HEXA-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv469704 CNV loss 16826518
nsv521971 CNV gain 19592680
nsv984090 CNV duplication 23825009

Relevant External Links for HEXA-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HEXA-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HEXA-AS1 Gene

Disorders for HEXA-AS1 Gene

Relevant External Links for HEXA-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HEXA-AS1

No disorders were found for HEXA-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HEXA-AS1 Gene

Publications for HEXA-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64
  4. Analysis of the DNA sequence and duplication history of human chromosome 15. (PMID: 16572171) Zody M.C. … Nusbaum C. (Nature 2006) 4 64

Products for HEXA-AS1 Gene

Sources for HEXA-AS1 Gene

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