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Aliases & Descriptions for HES1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| FLJ20408 1, 2 | | HES-1 1, 2 | | HHL 2, 3 | | HL 3 | | HRY 2, 3, 5 | | Hairy-like 3 | | Hes1 1 | | bHLHb39 1, 2 |
| | | Descriptions |
|---|
| Hairy and enhancer of split 1 2, 3 | | Hairy homolog 2, 3 | | hairy and enhancer of split 1, (Drosophila) 2 | | hairy homolog (Drosophila) 1 | | transcription factor HES-1 2 |
|
| | Search outside databases for aliases for HES1 genePrevious GC identifers: GC03P195130 GC03P195255 GC03P195174 |
Summaries for HES1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for HES1: This protein belongs to the basic helix-loop-helix family of transcription factors. It is a transcriptional repressor of genes that require a bHLH protein for their transcription. The protein has a particular type of basic domain that contains a helix interrupting protein that binds to the N-box rather than the canonical E-box. [provided by RefSeq] UniProtKB/Swiss-Prot: HES1_HUMAN, Q14469Function: Transcriptional repressor of genes that require a bHLH protein for their transcription. May act as a negative regulator of myogenesis by inhibiting the functions of MYOD1 and ASH1. Binds DNA on N-box motifs: 5'-CACNAG-3' with high affinity and on E-box motifs: 5'-CANNTG-3' with low affinity (By similarity)Gene Wiki entry for HES1 |
Genomic Location for HES1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the HES1 gene 
Entrez Gene cytogenetic band: 3q28-q29 Ensembl cytogenetic band: 3q29 HGNC cytogenetic band: 3q28-q29HES1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 3 GeneLoc Exon Structure GeneLoc location for GC03P195336:
(about GC identifiers)
Start:
|
195,336,628 bp from pter |
End:
|
195,339,090 bp from pter |
Size:
|
2,463 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000003.10 NT_005612.15
| Proteins for HES1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: HES1_HUMAN, Q14469 (See
protein sequence)Recommended Name: Transcription factor HES-1 Size: 280 amino acids; 29541 Da
Subunit: Transcription repression requires formation of a complex with a corepressor protein of the Groucho/TLE family. Interacts (via WPRW motif) with TLE1, and more weakly with TLE2. Interacts with HES6 (By similarity). Interacts with SIRT1
Subcellular location: Nucleus
Secondary accessions: Q6FHB2REFSEQ proteins: NP_005515.1
ENSEMBL proteins: ENSP00000232424
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: HES1 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for HES1: Assays for HES1: | Protein
Domains/ Families for HES1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q14469
ProtoNet protein and cluster: Q14469 2 Blocks protein families: IPB001092 Basic helix-loop-helix dimerization domain bHLH IPB003650 Orange
UniProtKB/Swiss-Prot: HES1_HUMAN, Q14469Domain: Has a particular type of basic domain (presence of a helix-interrupting proline) that binds to the N-box (CACNAG), rather than the canonical E-box (CANNTG)Domain: The C-terminal WRPW motif is a transcriptional repression domain necessary for the interaction with Groucho/TLE family members, transcriptional corepressors recruited to specific target DNA by Hairy-related proteins (By similarity)Domain: The bHLH, as well as cooperation between the central Orange domain and the C-terminal WRPW motif, is required for transcriptional repressor activity (By similarity)Similarity: Contains 1 basic helix-loop-helix (bHLH) domainSimilarity: Contains 1 Orange domain | Gene Function for HES1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_005524
Applied Biosystems Silencer® siRNAs for HES1
Sigma-Aldrich siRNA for HES1  Sigma-Aldrich shRNA Panels and shRNA for HES1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_005524                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_005524                                  untagged cDNA clone in CMV expression vector: NM_005524 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_005524
UniProtKB/Swiss-Prot: HES1_HUMAN, Q14469Function: Transcriptional repressor of genes that require a bHLH protein for their transcription. May act as a negative regulator of myogenesis by inhibiting the functions of MYOD1 and ASH1. Binds DNA on N-box motifs: 5'-CACNAG-3' with high affinity and on E-box motifs: 5'-CANNTG-3' with low affinity (By similarity)13 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Hes1):
2 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for HES1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
2 Sigma-Aldrich "Your Favorite Gene" Pathways for HES1 (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for HES1 
3 Interacting proteins for HES1 (ENSP000002324243) via UniProtKB, MINT, and/or STRINGAbout this table
5/22 Gene Ontology (GO) biological process terms (links to tree view) (see all 22
): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0000122 | negative regulation of transcription from RNA polymerase II promoter |
IEA | -- | | GO:0001701 | in utero embryonic development |
IEA | -- | | GO:0001889 | liver development |
IEA | -- | | GO:0006355 | regulation of transcription, DNA-dependent |
IEA | -- | | GO:0007155 | cell adhesion |
IEA | -- | About this table
|
Drugs & Compounds for HES1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for HES1 4 Novoseek chemical compound relationships for HES1 gene
About this table
|
Transcripts for HES1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_005524
Sigma-Aldrich siRNA for HES1  Sigma-Aldrich shRNA Panels and shRNA for HES1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_005524 REFSEQ mRNAs for HES1 gene: NM_005524.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_005524               OriGene GFP tagged cDNA clone in CMV expression vector: NM_005524                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_005524                                  untagged cDNA clone in CMV expression vector: NM_005524  Additional cDNA sequence: AF264785.1 AK000415.1 AK300482.1 BC005178.1 BC039152.1 CR541843.1 CR609648.1 CR610974.1 CR616000.1 8 DOTS entries: DT.455057 DT.97848019 DT.120913653 DT.100787901 DT.100787905 DT.95072022 DT.95285462 DT.100787904 24/213 AceView cDNA sequences (see all 213
):BF063295 AA428311 F29544 CB158770 NM_005524 H85827 CA443860 AW511570 BM091066 BU753172 AW189760 AW469992 BM820077 AW026193 BE857348 BM713155 BM718748 BM840285 BU753369 W19562 BM761683 BM760757 AI337008 AI431412
highest scoring ESTs for HES1:AA083206 AA083303 AA236810 AA305552 AA430428 AA588621 AA904840 AA907024 AA910411 AA913699 Unigene Cluster for HES1: Hairy and enhancer of split 1, (Drosophila) Hs.250666 [show with all ESTs]Unigene Representative Sequence: NM_005524
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000232424
|
Expression for HES1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| HES1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for HES1
1 / 2 / 3 5 probe-sets matching HES1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: CACTATATTT
SOURCE GeneReport for Unigene cluster: Hs.250666
Expression variation in blood from EXPOLDB for HES1 |
Orthologs for HES1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for HES1 gene from 5/11 species (see all 11
)
About this table Species with no ortholog for HES1
ENSEMBL Gene Tree for HES1 | Paralogs for HES1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for HES1 gene
- HES42 HES62 HES22 HES32
|
SNPs/Variants for HES1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for HES1 (up to first 250kb)
|
Disorders & Mutations for HES1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 139605
10/15 Novoseek disease relationships for HES1 gene (see all 15
)
About this table
Human Genome Epidemiology Navigator: HES1 (4 documents)
|
Medical News for HES1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for HES1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/164 PubMed articles for HES1 gene (see all 164
):- Genomic cloning and chromosomal localization of HRY, the human homolog to the Drosophila segmentation gene, hairy. (PubMed id 8020957)2, 3, 4 Feder J.N.... Jan Y.-N. (1994)
- Human Sir2-related protein SIRT1 associates with the bHLH repressors HES1 and HEY2 and is involved in HES1- and HEY2-mediated transcriptional repression. (PubMed id 12535671)1, 3, 4 Takata T. and Ishikawa F. (2003)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)3, 4 Ota T....Sugano S. (2004)
- HES-1, a novel target gene for the aryl hydrocarbon receptor. (PubMed id 14722248)1, 3 Thomsen J.S....Gustafsson J.A. (2004)
- Hes6 promotes cortical neurogenesis and inhibits Hes1 transcription repression activity by multiple mechanisms. (PubMed id 12972610)1, 3 Gratton M.O....Stifani S. (2003)
- Lack of nuclear expression of hairy and enhancer of split-1 (HES1) in pancreatic endocrine tumors. (PubMed id 18491256)1, 3 Johansson T....Skogseid B. (2008)
- The bHLH gene Hes6, an inhibitor of Hes1, promotes neuronal differentiation. (PubMed id 10851137)1, 3 Bae S.-K.... Kageyama R. (2000)
- Mediation of NGF signaling by post-translational inhibition of HES-1, a basic helix-loop-helix repressor of neuronal differentiation. (PubMed id 9389649)1, 3 Strom A....Caudy M. (1997)
- HES1 is a novel interactor of the Fanconi anemia core complex. (PubMed id 18550849)1, 3 Tremblay C.S....Carreau M. (2008)
- Modulation of basic helix-loop-helix transcription complex formation by Id proteins during neuronal differentiation. (PubMed id 11756408)1, 3 Jogi A....Axelson H. (2002)
|
Search for HES1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing HES1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing HES1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing HES1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for HES1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for HES1:

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