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Aliases for HERC2P9 Gene

Aliases for HERC2P9 Gene

  • Hect Domain And RLD 2 Pseudogene 9 2 3 5

External Ids for HERC2P9 Gene

Previous GeneCards Identifiers for HERC2P9 Gene

  • GC15P028875
  • GC15M006567
  • GC15P028835

Summaries for HERC2P9 Gene

GeneCards Summary for HERC2P9 Gene

HERC2P9 (Hect Domain And RLD 2 Pseudogene 9) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HERC2P9 Gene

Genomics for HERC2P9 Gene

Regulatory Elements for HERC2P9 Gene

Enhancers for HERC2P9 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around HERC2P9 on UCSC Golden Path with GeneCards custom track

Genomic Location for HERC2P9 Gene

Chromosome:
15
Start:
28,589,492 bp from pter
End:
28,685,264 bp from pter
Size:
95,773 bases
Orientation:
Plus strand

Genomic View for HERC2P9 Gene

Genes around HERC2P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HERC2P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HERC2P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HERC2P9 Gene

Proteins for HERC2P9 Gene

Post-translational modifications for HERC2P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HERC2P9 Gene

Domains & Families for HERC2P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HERC2P9 Gene

Function for HERC2P9 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HERC2P9 Gene

Localization for HERC2P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HERC2P9 Gene

Pathways & Interactions for HERC2P9 Gene

SuperPathways for HERC2P9 Gene

No Data Available

Interacting Proteins for HERC2P9 Gene

Gene Ontology (GO) - Biological Process for HERC2P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HERC2P9 Gene

Drugs & Compounds for HERC2P9 Gene

No Compound Related Data Available

Transcripts for HERC2P9 Gene

mRNA/cDNA for HERC2P9 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for HERC2P9 Gene

No ASD Table

Relevant External Links for HERC2P9 Gene

GeneLoc Exon Structure for
HERC2P9
ECgene alternative splicing isoforms for
HERC2P9

Expression for HERC2P9 Gene

mRNA expression in normal human tissues for HERC2P9 Gene

genes like me logo Genes that share expression patterns with HERC2P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for HERC2P9 Gene

Orthologs for HERC2P9 Gene

Evolution for HERC2P9 Gene

ENSEMBL:
Gene Tree for HERC2P9 (if available)
TreeFam:
Gene Tree for HERC2P9 (if available)

No data available for Orthologs for HERC2P9 Gene

Paralogs for HERC2P9 Gene

No data available for Paralogs for HERC2P9 Gene

Variants for HERC2P9 Gene

Sequence variations from dbSNP and Humsavar for HERC2P9 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs6655 -- 28,684,956(+) GATCT(C/T)TCTAC nc-transcript-variant
rs4932006 -- 28,658,997(-) AATGG(A/G)AAGGC intron-variant
rs371166 -- 28,680,624(+) ACCCC(A/G)CCCCC intron-variant
rs374137 -- 28,677,303(-) ccttt(A/G)cattt intron-variant
rs374576 -- 28,654,272(+) CCCGC(A/C)GCTTC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for HERC2P9 Gene

Variant ID Type Subtype PubMed ID
nsv428299 CNV Loss 18775914
dgv713e1 CNV Complex 17122850
esv2674813 CNV Deletion 23128226
esv26019 CNV Gain+Loss 19812545
nsv469678 CNV Complex 16826518
dgv715e1 CNV Complex 17122850
nsv471678 CNV Loss 15918152
nsv9216 CNV Gain+Loss 18304495
esv994657 CNV Loss 20482838
esv2749506 CNV Deletion 23290073
nsv832942 CNV Gain 17160897
nsv9217 CNV Gain+Loss 18304495
nsv9218 CNV Loss 18304495

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for HERC2P9 Gene

Disorders for HERC2P9 Gene

Relevant External Links for HERC2P9

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HERC2P9

No disorders were found for HERC2P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HERC2P9 Gene

Publications for HERC2P9 Gene

  1. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3 67
  2. The lacrimal gland transcriptome is an unusually rich source of rare and poorly characterized gene transcripts. (PMID: 15851553) Ozyildirim A.M. … Laurie G.W. (Invest. Ophthalmol. Vis. Sci. 2005) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  4. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for HERC2P9 Gene

Sources for HERC2P9 Gene

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