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Aliases for HERC2P7 Gene

Aliases for HERC2P7 Gene

  • Hect Domain And RLD 2 Pseudogene 7 2 3 5

External Ids for HERC2P7 Gene

Previous GeneCards Identifiers for HERC2P7 Gene

  • GC15U990057
  • GC15P026247
  • GC15P028573
  • GC15P023713
  • GC15M001693
  • GC15P023744
  • GC15P023754
  • GC15P023782
  • GC15P023812
  • GC15P023846
  • GC15P023876
  • GC15P023907

Summaries for HERC2P7 Gene

GeneCards Summary for HERC2P7 Gene

HERC2P7 (Hect Domain And RLD 2 Pseudogene 7) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HERC2P7 Gene

Genomics for HERC2P7 Gene

Regulatory Elements for HERC2P7 Gene

Enhancers for HERC2P7 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F022837 0.5 ENCODE 10.6 -357.0 -357025 3.8 HDGF ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 CBX5 NIPA2 CYFIP1 HERC2P7 PIR62888
GH15F023038 0.5 ENCODE 10.5 -556.9 -556881 2.2 HDGF PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF207 HERC2P7 TUBGCP5 CYFIP1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HERC2P7 on UCSC Golden Path with GeneCards custom track

Genomic Location for HERC2P7 Gene

Chromosome:
15
Start:
22,479,153 bp from pter
End:
22,482,374 bp from pter
Size:
3,222 bases
Orientation:
Minus strand

Genomic View for HERC2P7 Gene

Genes around HERC2P7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HERC2P7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HERC2P7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HERC2P7 Gene

Proteins for HERC2P7 Gene

Post-translational modifications for HERC2P7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HERC2P7 Gene

Domains & Families for HERC2P7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HERC2P7 Gene

Function for HERC2P7 Gene

Molecular function for HERC2P7 Gene

GENATLAS Biochemistry:
HECT domain and RLD2,pseudogene 7

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HERC2P7 Gene

Localization for HERC2P7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HERC2P7 Gene

Pathways & Interactions for HERC2P7 Gene

SuperPathways for HERC2P7 Gene

No Data Available

Interacting Proteins for HERC2P7 Gene

Gene Ontology (GO) - Biological Process for HERC2P7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HERC2P7 Gene

Transcripts for HERC2P7 Gene

mRNA/cDNA for HERC2P7 Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HERC2P7 Gene

Hect domain and RLD 2 pseudogene 7:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HERC2P7 Gene

No ASD Table

Relevant External Links for HERC2P7 Gene

GeneLoc Exon Structure for
HERC2P7
ECgene alternative splicing isoforms for
HERC2P7

Expression for HERC2P7 Gene

mRNA expression in normal human tissues for HERC2P7 Gene

NURSA nuclear receptor signaling pathways regulating expression of HERC2P7 Gene:

HERC2P7

SOURCE GeneReport for Unigene cluster for HERC2P7 Gene:

Hs.146211
genes like me logo Genes that share expression patterns with HERC2P7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HERC2P7 Gene

Orthologs for HERC2P7 Gene

Evolution for HERC2P7 Gene

ENSEMBL:
Gene Tree for HERC2P7 (if available)
TreeFam:
Gene Tree for HERC2P7 (if available)

No data available for Orthologs for HERC2P7 Gene

Paralogs for HERC2P7 Gene

No data available for Paralogs for HERC2P7 Gene

Variants for HERC2P7 Gene

Sequence variations from dbSNP and Humsavar for HERC2P7 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs111905058 -- 22,483,821(-) TTTCT(C/T)GACAT upstream-variant-2KB
rs112679632 -- 22,483,813(-) CATAG(A/T)AATTT upstream-variant-2KB
rs11486385 -- 22,479,842(-) CTGAC(A/G)TCAGG nc-transcript-variant
rs140207278 -- 22,480,162(-) CAGGT(G/T)GTCCA nc-transcript-variant
rs147772959 -- 22,479,085(-) GCAGC(C/T)GAGTA downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for HERC2P7 Gene

Variant ID Type Subtype PubMed ID
dgv1170n106 CNV duplication 24896259
dgv2407n100 CNV gain+loss 25217958
dgv2408n100 CNV loss 25217958
dgv2410n100 CNV gain 25217958
esv2474417 CNV loss 19546169
esv28050 CNV gain+loss 19812545
esv3335466 CNV duplication 20981092
esv3423785 CNV duplication 20981092
esv3435335 CNV duplication 20981092
esv3569265 CNV gain 25503493
esv3892626 CNV gain+loss 25118596
nsv1035969 CNV loss 25217958
nsv1040546 CNV gain 25217958
nsv1078378 CNV duplication 25765185
nsv1149605 CNV duplication 26484159
nsv433429 CNV gain 18776910
nsv433430 CNV gain 18776910
nsv511042 OTHER inversion 20534489

Relevant External Links for HERC2P7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HERC2P7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HERC2P7 Gene

Disorders for HERC2P7 Gene

Relevant External Links for HERC2P7

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HERC2P7

No disorders were found for HERC2P7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HERC2P7 Gene

Publications for HERC2P7 Gene

  1. The ancestral gene for transcribed, low-copy repeats in the Prader- Willi/Angelman region encodes a large protein implicated in protein trafficking, which is deficient in mice with neuromuscular and spermiogenic abnormalities. (PMID: 9949213) Ji Y. … Nicholls R.D. (Hum. Mol. Genet. 1999) 3 64

Products for HERC2P7 Gene

Sources for HERC2P7 Gene

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