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Aliases for HERC2P7 Gene

Aliases for HERC2P7 Gene

  • Hect Domain And RLD 2 Pseudogene 7 2 3

External Ids for HERC2P7 Gene

Summaries for HERC2P7 Gene

GeneCards Summary for HERC2P7 Gene

HERC2P7 (Hect Domain And RLD 2 Pseudogene 7) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HERC2P7 Gene

Genomics for HERC2P7 Gene

Genomic Location for HERC2P7 Gene

Start:
22,479,153 bp from pter
End:
22,482,374 bp from pter
Size:
3,222 bases
Orientation:
Minus strand

Genomic View for HERC2P7 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HERC2P7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HERC2P7 Gene

No data available for Regulatory Elements for HERC2P7 Gene

Proteins for HERC2P7 Gene

Post-translational modifications for HERC2P7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HERC2P7 Gene

Domains for HERC2P7 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for HERC2P7 Gene

Function for HERC2P7 Gene

Molecular function for HERC2P7 Gene

GENATLAS Biochemistry: HECT domain and RLD2,pseudogene 7

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for HERC2P7 Gene

Localization for HERC2P7 Gene

No data available for Gene Ontology (GO) - Cellular Components for HERC2P7 Gene

Pathways for HERC2P7 Gene

SuperPathways for HERC2P7 Gene

No Data Available

Interacting Proteins for HERC2P7 Gene

Gene Ontology (GO) - Biological Process for HERC2P7 Gene

None

No data available for Pathways by source for HERC2P7 Gene

Transcripts for HERC2P7 Gene

mRNA/cDNA for HERC2P7 Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HERC2P7 Gene

Hect domain and RLD 2 pseudogene 7:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HERC2P7 Gene

No ASD Table

Relevant External Links for HERC2P7 Gene

GeneLoc Exon Structure for
HERC2P7
ECgene alternative splicing isoforms for
HERC2P7

Expression for HERC2P7 Gene

mRNA expression in normal human tissues for HERC2P7 Gene

SOURCE GeneReport for Unigene cluster for HERC2P7 Gene Hs.146211

genes like me logo Genes that share expressions with HERC2P7: view

Orthologs for HERC2P7 Gene

Evolution for HERC2P7 Gene

ENSEMBL:
Gene Tree for HERC2P7 (if available)
TreeFam:
Gene Tree for HERC2P7 (if available)

No data available for Orthologs for HERC2P7 Gene

Paralogs for HERC2P7 Gene

No data available for Paralogs for HERC2P7 Gene

Variants for HERC2P7 Gene

Sequence variations from dbSNP and Humsavar for HERC2P7 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs3102425 -- 22,481,387(-) CCTGA(G/T)GTTGG intron-variant
rs3102426 -- 22,481,356(-) CTAGG(C/T)TCAAA intron-variant
rs11486385 -- 22,479,842(-) CTGAC(A/G)TCAGG nc-transcript-variant
rs28362102 -- 22,480,068(-) TTTTT(G/T)TTTTT nc-transcript-variant
rs28497005 -- 22,481,445(-) TTTTT(C/T)TTTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for HERC2P7 Gene

Variant ID Type Subtype PubMed ID
dgv44n16 CNV Insertion 17901297
nsv511042 OTHER Inversion 20534489
nsv433429 CNV Gain 18776910
esv2474417 CNV Loss 19546169
nsv428297 CNV Gain+Loss 18775914
nsv903573 CNV Gain 21882294
dgv698e1 CNV Complex 17122850
dgv699e1 CNV Complex 17122850
esv28050 CNV Gain+Loss 19812545
nsv433430 CNV Gain 18776910
nsv832929 CNV Gain 17160897
dgv2249n71 CNV Gain 21882294
nsv903576 CNV Loss 21882294
nsv9189 CNV Gain+Loss 18304495
dgv700e1 CNV Complex 17122850

Relevant External Links for HERC2P7 Gene

HapMap Linkage Disequilibrium report
HERC2P7

Disorders for HERC2P7 Gene

No disorders were found for HERC2P7 Gene.

No data available for UniProtKB/Swiss-Prot for HERC2P7 Gene

Publications for HERC2P7 Gene

  1. The ancestral gene for transcribed, low-copy repeats in the Prader- Willi/Angelman region encodes a large protein implicated in protein trafficking, which is deficient in mice with neuromuscular and spermiogenic abnormalities. (PMID: 9949213) Ji Y. … Nicholls R.D. (Hum. Mol. Genet. 1999) 3

Products for HERC2P7 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate HERC2P7
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for HERC2P7
    • Block miRNA regulation of HERC2P7 using miScript Target Protectors

    Sources for HERC2P7 Gene

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