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Aliases for HERC2P4 Gene

Aliases for HERC2P4 Gene

  • Hect Domain And RLD 2 Pseudogene 4 2 3
  • HECT And RLD Domain Containing E3 Ubiquitin Protein Ligase 2 Pseudogene 3
  • D16F37S5 3

External Ids for HERC2P4 Gene

Previous GeneCards Identifiers for HERC2P4 Gene

  • GC16U990076
  • GC16M032073
  • GC16M032163

Summaries for HERC2P4 Gene

GeneCards Summary for HERC2P4 Gene

HERC2P4 (Hect Domain And RLD 2 Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HERC2P4 Gene

Genomics for HERC2P4 Gene

Regulatory Elements for HERC2P4 Gene

Genomic Location for HERC2P4 Gene

Start:
32,103,245 bp from pter
End:
32,188,113 bp from pter
Size:
84,869 bases
Orientation:
Minus strand

Genomic View for HERC2P4 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HERC2P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HERC2P4 Gene

Proteins for HERC2P4 Gene

Post-translational modifications for HERC2P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HERC2P4 Gene

Domains for HERC2P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HERC2P4 Gene

Function for HERC2P4 Gene

Molecular function for HERC2P4 Gene

GENATLAS Biochemistry: HECT domain and RLD2,pseudogene 4

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for HERC2P4 Gene

Localization for HERC2P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HERC2P4 Gene

Pathways for HERC2P4 Gene

SuperPathways for HERC2P4 Gene

No Data Available

Interacting Proteins for HERC2P4 Gene

Gene Ontology (GO) - Biological Process for HERC2P4 Gene

None

No data available for Pathways by source for HERC2P4 Gene

Transcripts for HERC2P4 Gene

mRNA/cDNA for HERC2P4 Gene

(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HERC2P4 Gene

No ASD Table

Relevant External Links for HERC2P4 Gene

GeneLoc Exon Structure for
HERC2P4
ECgene alternative splicing isoforms for
HERC2P4

Expression for HERC2P4 Gene

mRNA expression in normal human tissues for HERC2P4 Gene

genes like me logo Genes that share expressions with HERC2P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for HERC2P4 Gene

Orthologs for HERC2P4 Gene

Evolution for HERC2P4 Gene

ENSEMBL:
Gene Tree for HERC2P4 (if available)
TreeFam:
Gene Tree for HERC2P4 (if available)

No data available for Orthologs for HERC2P4 Gene

Paralogs for HERC2P4 Gene

No data available for Paralogs for HERC2P4 Gene

Variants for HERC2P4 Gene

Sequence variations from dbSNP and Humsavar for HERC2P4 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs150040 -- 32,186,243(-) AGTAT(G/T)TGTTA intron-variant
rs150046 -- 32,189,748(-) ggaca(C/T)ggtgg upstream-variant-2KB
rs175611 -- 32,177,637(-) gcctc(A/G)gcctc intron-variant
rs175612 -- 32,177,630(-) cctcc(A/G)aaagt intron-variant
rs369700 -- 32,180,891(-) TACCA(C/T)GGCTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for HERC2P4 Gene

Variant ID Type Subtype PubMed ID
dgv848e1 CNV Complex 17122850
dgv850e1 CNV Complex 17122850
dgv851e1 CNV Complex 17122850
dgv852e1 CNV Complex 17122850
dgv853e1 CNV Complex 17122850
nsv428325 CNV Gain+Loss 18775914
nsv9439 CNV Gain+Loss 18304495
dgv2676n71 CNV Gain 21882294
nsv905765 CNV Loss 21882294
dgv2677n71 CNV Gain 21882294
nsv905767 CNV Gain 21882294
nsv433444 CNV Gain 18776910
dgv854e1 CNV Complex 17122850
essv11015 CNV CNV 17122850
esv29952 CNV Gain 18421352
esv33069 CNV Loss 17666407
nsv436841 CNV Insertion 17901297
dgv2678n71 CNV Loss 21882294
esv2714201 CNV Deletion 23290073
dgv855e1 CNV Complex 17122850
dgv856e1 CNV Complex 17122850
dgv857e1 CNV Complex 17122850
nsv833198 CNV Gain+Loss 17160897
dgv2679n71 CNV Gain 21882294
dgv2680n71 CNV Loss 21882294
dgv2681n71 CNV Gain 21882294
dgv2682n71 CNV Gain 21882294
dgv2683n71 CNV Loss 21882294
nsv469816 CNV Complex 16826518
nsv471693 CNV Gain+Loss 15918152
nsv520222 CNV Loss 19592680
nsv527583 CNV Gain 19592680
nsv442720 CNV CNV 18776908
nsv7281 OTHER Inversion 18451855
nsv905790 CNV Gain+Loss 21882294
esv27116 CNV Gain+Loss 19812545

Relevant External Links for HERC2P4 Gene

HapMap Linkage Disequilibrium report
HERC2P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for HERC2P4 Gene

Disorders for HERC2P4 Gene

No disorders were found for HERC2P4 Gene.

No data available for UniProtKB/Swiss-Prot for HERC2P4 Gene

Publications for HERC2P4 Gene

  1. Expressed copies of the MN7 (D15F37) gene family map close to the common deletion breakpoints in the Prader-Willi/Angelman syndromes. (PMID: 9730612) Buiting K. … Horsthemke B. (Cytogenet. Cell Genet. 1998) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. A protein interaction framework for human mRNA degradation. (PMID: 15231747) Lehner B. … Sanderson C.M. (Genome Res. 2004) 3

Products for HERC2P4 Gene

Sources for HERC2P4 Gene

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