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Aliases for HERC2P3 Gene

Aliases for HERC2P3 Gene

  • Hect Domain And RLD 2 Pseudogene 3 2 3 5
  • D15F37S4 3

External Ids for HERC2P3 Gene

Previous GeneCards Identifiers for HERC2P3 Gene

  • GC15U990059
  • GC15M018849
  • GC15M020589

Summaries for HERC2P3 Gene

GeneCards Summary for HERC2P3 Gene

HERC2P3 (Hect Domain And RLD 2 Pseudogene 3) is a Pseudogene. GO annotations related to this gene include ubiquitin-protein transferase activity.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HERC2P3 Gene

Genomics for HERC2P3 Gene

Regulatory Elements for HERC2P3 Gene

Enhancers for HERC2P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around HERC2P3 on UCSC Golden Path with GeneCards custom track

Promoters for HERC2P3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around HERC2P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for HERC2P3 Gene

Chromosome:
15
Start:
20,379,495 bp from pter
End:
20,506,180 bp from pter
Size:
126,686 bases
Orientation:
Minus strand

Genomic View for HERC2P3 Gene

Genes around HERC2P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HERC2P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HERC2P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HERC2P3 Gene

Proteins for HERC2P3 Gene

  • Protein details for HERC2P3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BVR0-HRC23_HUMAN
    Recommended name:
    Putative HERC2-like protein 3
    Protein Accession:
    Q9BVR0

    Protein attributes for HERC2P3 Gene

    Size:
    1158 amino acids
    Molecular mass:
    128943 Da
    Quaternary structure:
    No Data Available

neXtProt entry for HERC2P3 Gene

Post-translational modifications for HERC2P3 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for HERC2P3 Gene

Domains & Families for HERC2P3 Gene

Protein Domains for HERC2P3 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for HERC2P3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9BVR0

UniProtKB/Swiss-Prot:

HRC23_HUMAN :
  • Contains 1 MIB/HERC2 domain.
Domain:
  • Contains 1 MIB/HERC2 domain.
genes like me logo Genes that share domains with HERC2P3: view

No data available for Gene Families for HERC2P3 Gene

Function for HERC2P3 Gene

Molecular function for HERC2P3 Gene

GENATLAS Biochemistry:
HECT domain and RLD2,pseudogene 3

Gene Ontology (GO) - Molecular Function for HERC2P3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004842 ubiquitin-protein transferase activity IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with HERC2P3: view
genes like me logo Genes that share phenotypes with HERC2P3: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HERC2P3 Gene

Localization for HERC2P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HERC2P3 Gene

Pathways & Interactions for HERC2P3 Gene

SuperPathways for HERC2P3 Gene

No Data Available

Interacting Proteins for HERC2P3 Gene

Gene Ontology (GO) - Biological Process for HERC2P3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016567 protein ubiquitination IEA --
genes like me logo Genes that share ontologies with HERC2P3: view

No data available for Pathways by source and SIGNOR curated interactions for HERC2P3 Gene

Drugs & Compounds for HERC2P3 Gene

No Compound Related Data Available

Transcripts for HERC2P3 Gene

Unigene Clusters for HERC2P3 Gene

Hect domain and RLD 2 pseudogene 3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HERC2P3 Gene

No ASD Table

Relevant External Links for HERC2P3 Gene

GeneLoc Exon Structure for
HERC2P3
ECgene alternative splicing isoforms for
HERC2P3

Expression for HERC2P3 Gene

mRNA expression in normal human tissues for HERC2P3 Gene

mRNA differential expression in normal tissues according to GTEx for HERC2P3 Gene

This gene is overexpressed in Brain - Substantia nigra (x4.2).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for HERC2P3 Gene



NURSA nuclear receptor signaling pathways regulating expression of HERC2P3 Gene:

HERC2P3

SOURCE GeneReport for Unigene cluster for HERC2P3 Gene:

Hs.608918
genes like me logo Genes that share expression patterns with HERC2P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HERC2P3 Gene

Orthologs for HERC2P3 Gene

Evolution for HERC2P3 Gene

ENSEMBL:
Gene Tree for HERC2P3 (if available)
TreeFam:
Gene Tree for HERC2P3 (if available)

No data available for Orthologs for HERC2P3 Gene

Paralogs for HERC2P3 Gene

(1) SIMAP similar genes for HERC2P3 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with HERC2P3: view

No data available for Paralogs for HERC2P3 Gene

Variants for HERC2P3 Gene

Sequence variations from dbSNP and Humsavar for HERC2P3 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs17134681 - 20,440,547(-) CTCCC(C/T)GCAGT nc-transcript-variant
VAR_046345 -
rs2638728 -- 20,483,235(-) GCTGC(C/T)CGGAT intron-variant
rs2640389 -- 20,435,500(-) CAAGA(A/T)GAACC intron-variant
rs2650867 -- 20,436,655(+) TCATA(A/T)ATGCT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for HERC2P3 Gene

Variant ID Type Subtype PubMed ID
dgv1355e59 CNV duplication 20981092
dgv1356e59 CNV duplication 20981092
dgv1357e59 CNV duplication 20981092
dgv1358e59 CNV duplication 20981092
dgv1n1 OTHER inversion 15895083
dgv2174n100 CNV gain 25217958
dgv2175n100 CNV gain 25217958
dgv2176n100 CNV gain 25217958
dgv2179n100 CNV gain 25217958
dgv2180n100 CNV loss 25217958
dgv2181n100 CNV gain 25217958
dgv2182n100 CNV gain 25217958
dgv2183n100 CNV loss 25217958
dgv2185n100 CNV gain+loss 25217958
dgv2186n100 CNV gain+loss 25217958
dgv2187n100 CNV gain 25217958
dgv2188n100 CNV loss 25217958
dgv2189n100 CNV gain+loss 25217958
dgv2190n100 CNV gain+loss 25217958
dgv2191n100 CNV gain+loss 25217958
dgv2192n100 CNV loss 25217958
dgv2193n100 CNV gain+loss 25217958
dgv2194n100 CNV loss 25217958
dgv2195n100 CNV loss 25217958
dgv2197n100 CNV loss 25217958
dgv2198n100 CNV gain+loss 25217958
dgv2199n100 CNV gain 25217958
dgv2200n100 CNV gain 25217958
dgv2201n100 CNV gain 25217958
dgv2202n100 CNV loss 25217958
dgv2205n100 CNV gain 25217958
dgv2206n100 CNV gain 25217958
dgv2207n100 CNV loss 25217958
dgv2208n100 CNV gain 25217958
dgv2209n100 CNV gain+loss 25217958
dgv2210n100 CNV gain 25217958
dgv2211n100 CNV loss 25217958
dgv2212n100 CNV gain 25217958
dgv2213n100 CNV loss 25217958
dgv2214n100 CNV gain 25217958
dgv2215n100 CNV loss 25217958
dgv2216n100 CNV gain+loss 25217958
dgv2217n100 CNV gain 25217958
dgv2220n100 CNV loss 25217958
dgv2221n100 CNV gain+loss 25217958
dgv2222n100 CNV gain+loss 25217958
dgv2225n100 CNV loss 25217958
dgv2226n100 CNV gain+loss 25217958
dgv2227n100 CNV gain 25217958
dgv2228n100 CNV gain 25217958
dgv2230n100 CNV gain 25217958
dgv2231n100 CNV gain+loss 25217958
dgv2232n100 CNV loss 25217958
dgv2233n100 CNV loss 25217958
dgv2235n100 CNV loss 25217958
dgv2236n100 CNV gain 25217958
dgv2237n100 CNV gain 25217958
dgv2238n100 CNV gain 25217958
dgv2241n100 CNV loss 25217958
dgv2242n100 CNV gain+loss 25217958
dgv2243n100 CNV gain+loss 25217958
dgv2244n100 CNV loss 25217958
dgv2245n100 CNV loss 25217958
dgv2246n100 CNV gain+loss 25217958
dgv2247n100 CNV gain+loss 25217958
dgv2248n100 CNV gain+loss 25217958
dgv2249n100 CNV gain+loss 25217958
dgv2250n100 CNV gain+loss 25217958
dgv2251n100 CNV gain 25217958
dgv2254n100 CNV loss 25217958
dgv2255n100 CNV gain 25217958
dgv2256n100 CNV loss 25217958
dgv2257n100 CNV gain 25217958
dgv2260n100 CNV gain+loss 25217958
dgv2261n100 CNV gain+loss 25217958
dgv2264n100 CNV gain 25217958
dgv2265n100 CNV loss 25217958
dgv2266n100 CNV loss 25217958
dgv2271n100 CNV gain+loss 25217958
dgv2272n100 CNV gain+loss 25217958
dgv2273n100 CNV gain+loss 25217958
dgv2274n100 CNV loss 25217958
dgv2275n100 CNV loss 25217958
dgv2277n100 CNV loss 25217958
dgv28n68 CNV gain+loss 17160897
dgv414n67 CNV gain 20364138
dgv415n67 CNV gain 20364138
dgv4162n54 CNV loss 21841781
dgv4164n54 CNV loss 21841781
dgv4166n54 CNV gain 21841781
dgv4169n54 CNV gain 21841781
dgv4174n54 CNV loss 21841781
dgv4178n54 CNV gain 21841781
dgv4179n54 CNV loss 21841781
dgv417n67 CNV gain 20364138
dgv4180n54 CNV gain 21841781
dgv4181n54 CNV loss 21841781
dgv4182n54 CNV loss 21841781
dgv4183n54 CNV loss 21841781
dgv4184n54 CNV loss 21841781
dgv4188n54 CNV gain 21841781
dgv4189n54 CNV loss 21841781
dgv4191n54 CNV loss 21841781
dgv4194n54 CNV loss 21841781
dgv4198n54 CNV loss 21841781
dgv4203n54 CNV loss 21841781
dgv4205n54 CNV gain 21841781
dgv4207n54 CNV loss 21841781
dgv4208n54 CNV loss 21841781
dgv4209n54 CNV loss 21841781
dgv430e214 CNV gain 21293372
dgv43n16 CNV insertion 17901297
dgv8n14 CNV loss 18776910
dgv91e55 CNV gain 17911159
dgv92e55 CNV gain 17911159
dgv93e55 CNV gain 17911159
dgv94n111 CNV duplication 26073780
dgv95e55 CNV loss 17911159
dgv95n111 CNV duplication 26073780
dgv96e55 CNV loss 17911159
dgv96n111 CNV duplication 26073780
esv1004259 OTHER inversion 20482838
esv22518 CNV gain+loss 19812545
esv2751488 CNV loss 17911159
esv29956 CNV loss 18421352
esv33051 CNV gain+loss 17666407
esv3332532 CNV duplication 20981092
esv3344113 CNV duplication 20981092
esv3351970 CNV duplication 20981092
esv3368350 CNV duplication 20981092
esv3378621 CNV duplication 20981092
esv3380173 CNV duplication 20981092
esv3381560 CNV duplication 20981092
esv3393258 CNV duplication 20981092
esv3395014 CNV duplication 20981092
esv3399589 CNV duplication 20981092
esv3410031 CNV duplication 20981092
esv3413344 CNV duplication 20981092
esv3415833 CNV duplication 20981092
esv3416081 CNV duplication 20981092
esv3429637 CNV duplication 20981092
esv3448284 CNV duplication 20981092
esv3584810 CNV gain 24956385
esv3584821 CNV gain 24956385
esv3584832 CNV gain 24956385
esv3892600 CNV loss 25118596
esv3892607 CNV gain 25118596
esv3892618 CNV gain 25118596
esv6472 CNV gain 19470904
esv988919 CNV loss 20482838
esv998961 CNV loss 20482838
nsv1035597 CNV gain 25217958
nsv1041204 CNV gain+loss 25217958
nsv1042962 CNV loss 25217958
nsv1043012 CNV gain 25217958
nsv1046237 CNV gain+loss 25217958
nsv1046823 CNV gain 25217958
nsv1075467 CNV duplication 25765185
nsv1077791 CNV duplication 25765185
nsv1078368 CNV duplication 25765185
nsv1115475 CNV duplication 24896259
nsv1118544 CNV duplication 24896259
nsv1127414 CNV deletion 24896259
nsv1128706 CNV duplication 24896259
nsv1132392 CNV duplication 24896259
nsv1148902 CNV duplication 26484159
nsv1160218 CNV duplication 26073780
nsv1160225 OTHER complex 26073780
nsv1160226 CNV duplication 26073780
nsv1452 CNV deletion 18451855
nsv428296 CNV gain+loss 18775914
nsv433426 CNV gain 18776910
nsv436198 CNV deletion 17901297
nsv511040 OTHER inversion 20534489
nsv514762 CNV gain 21397061
nsv514763 CNV gain 21397061
nsv567308 CNV gain+loss 21841781
nsv567312 CNV gain 21841781
nsv567451 CNV gain+loss 21841781
nsv567464 CNV gain 21841781
nsv7260 OTHER inversion 18451855
nsv819770 CNV gain 19587683
nsv821092 CNV duplication 20802225
nsv821678 CNV loss 15273396
nsv832908 CNV gain 17160897
nsv9179 CNV gain+loss 18304495
nsv952312 CNV duplication 24416366
nsv976878 CNV duplication 23825009
nsv977647 CNV duplication 23825009
nsv984008 CNV duplication 23825009
nsv984123 CNV duplication 23825009

Relevant External Links for HERC2P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HERC2P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HERC2P3 Gene

Disorders for HERC2P3 Gene

Relevant External Links for HERC2P3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HERC2P3

No disorders were found for HERC2P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HERC2P3 Gene

Publications for HERC2P3 Gene

  1. Expressed copies of the MN7 (D15F37) gene family map close to the common deletion breakpoints in the Prader-Willi/Angelman syndromes. (PMID: 9730612) Buiting K. … Horsthemke B. (Cytogenet. Cell Genet. 1998) 2 3 65
  2. Analysis of the DNA sequence and duplication history of human chromosome 15. (PMID: 16572171) Zody M.C. … Nusbaum C. (Nature 2006) 4 65
  3. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3 65
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 65
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 65

Products for HERC2P3 Gene

Sources for HERC2P3 Gene

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