Aliases for HERC2P3 Gene
External Ids for HERC2P3 Gene
- HGNC: 4871
- Entrez Gene: 283755
- Ensembl: ENSG00000180229
- UniProtKB: Q9BVR0
Previous GeneCards Identifiers for HERC2P3 Gene
- GC15U990059
- GC15M018849
- GC15M020589
Summaries for HERC2P3 Gene
GeneCards Summary for HERC2P3 Gene
HERC2P3 (Hect Domain And RLD 2 Pseudogene 3) is a Pseudogene. GO annotations related to this gene include ubiquitin-protein transferase activity.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HERC2P3 Gene
Genomics for HERC2P3 Gene
Regulatory Elements for HERC2P3 Gene
Promoters for HERC2P3 Gene
| Ensembl Regulatory Elements (ENSRs) | TSS Distance (bp) | Size (bp) | Binding Sites for Transcription Factors within promoters |
|---|---|---|---|
| ENSR00000073928 | 280 | 2201 |
Regulatory Element Products
Genomic Location for HERC2P3 Gene
- Chromosome:
- 15
- Start:
- 20,379,495 bp from pter
- End:
- 20,506,180 bp from pter
- Size:
- 126,686 bases
- Orientation:
- Minus strand
Genomic View for HERC2P3 Gene
Genes around HERC2P3 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 15q11.2 by Ensembl
- 15q11.1-q11.2 by Entrez Gene
- 15q11.1-q11.2 by HGNC
HERC2P3 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for HERC2P3 Gene
Proteins for HERC2P3 Gene
-
Protein details for HERC2P3 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q9BVR0-HRC23_HUMAN
- Recommended name:
- Putative HERC2-like protein 3
- Protein Accession:
- Q9BVR0
Protein attributes for HERC2P3 Gene
- Size:
- 1158 amino acids
- Molecular mass:
- 128943 Da
- Quaternary structure:
- No Data Available
Protein Expression for HERC2P3 Gene
Post-translational modifications for HERC2P3 Gene
Antibody Products
- Search GeneTex for Antibodies for HERC2P3
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HERC2P3
- Origene Custom Protein Services for HERC2P3
- Search GeneTex for Proteins for HERC2P3
Assay Products
No data available for DME Specific Peptides for HERC2P3 Gene
Domains & Families for HERC2P3 Gene
Suggested Antigen Peptide Sequences for HERC2P3 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families and UniProtKB/Swiss-Prot for HERC2P3 Gene
Function for HERC2P3 Gene
Molecular function for HERC2P3 Gene
- GENATLAS Biochemistry:
- HECT domain and RLD2,pseudogene 3
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0004842 | ubiquitin-protein transferase activity | IEA | -- |
| GO:0046872 | metal ion binding | IEA | -- |
Phenotypes for HERC2P3 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for HERC2P3
CRISPR Products
- Browse CRISPR knockouts for HERC2P3
miRNA Products
- Search ViGene Biosciences for HERC2P3
Inhibitory RNA Products
- Origene RNAi, siRNA, and shRNA products in human, mouse, rat for HERC2P3
- Browse OriGene Inhibitory RNA Products For HERC2P3
- Search ViGene Biosciences for HERC2P3
Cell Line Products
- Search ViGene Biosciences for HERC2P3
Flow Cytometry Products
No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HERC2P3 Gene
Localization for HERC2P3 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HERC2P3 Gene
Pathways & Interactions for HERC2P3 Gene
No Data Available
Interacting Proteins for HERC2P3 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0016567 | protein ubiquitination | IEA | -- |
No data available for Pathways by source and SIGNOR curated interactions for HERC2P3 Gene
Transcripts for HERC2P3 Gene
mRNA/cDNA for HERC2P3 Gene
- (1) REFSEQ mRNAs :
- (8) Additional mRNA sequences :
- (247) Selected AceView cDNA sequences:
- (13) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for HERC2P3 Gene
CRISPR Products
- Browse CRISPR knockouts for HERC2P3
miRNA Products
- Search ViGene Biosciences for HERC2P3
Inhibitory RNA Products
- Origene RNAi, siRNA, and shRNA products in human, mouse, rat for HERC2P3
- Browse OriGene Inhibitory RNA Products For HERC2P3
- Search ViGene Biosciences for HERC2P3
Flow Cytometry Products
Expression for HERC2P3 Gene
mRNA differential expression in normal tissues according to GTEx for HERC2P3 Gene
This gene is overexpressed in Brain - Substantia nigra (x4.2).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for HERC2P3 Gene
NURSA nuclear receptor signaling pathways regulating expression of HERC2P3 Gene:
HERC2P3SOURCE GeneReport for Unigene cluster for HERC2P3 Gene:
Hs.608918Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HERC2P3 Gene
Orthologs for HERC2P3 Gene
No data available for Orthologs for HERC2P3 Gene
Paralogs for HERC2P3 Gene
(1) SIMAP similar genes for HERC2P3 Gene using alignment to 1 proteins:
No data available for Paralogs for HERC2P3 Gene
Variants for HERC2P3 Gene
| SNP ID | Clin | Chr 15 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs1000155352 | -- | 20,447,347(+) | TAGGG(C/T)CCCCA | intron-variant | |
| rs1000633565 | -- | 20,430,323(+) | CACCC(C/G)CACCA | intron-variant | |
| rs1000726442 | -- | 20,428,836(+) | TTATA(G/T)TCCAA | intron-variant | |
| rs1000760321 | -- | 20,457,370(+) | AACTT(A/G)ACAAT | nc-transcript-variant | |
| rs1000809163 | -- | 20,496,370(+) | TTAAG(C/T)ACGTC | intron-variant |
Relevant External Links for HERC2P3 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- HERC2P3
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HERC2P3 Gene
Disorders for HERC2P3 Gene
Relevant External Links for HERC2P3
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- HERC2P3
No disorders were found for HERC2P3 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HERC2P3 Gene
Publications for HERC2P3 Gene
- Expressed copies of the MN7 (D15F37) gene family map close to the common deletion breakpoints in the Prader-Willi/Angelman syndromes. (PMID: 9730612) Buiting K. … Horsthemke B. (Cytogenet. Cell Genet. 1998) 2 3 64
- Analysis of the DNA sequence and duplication history of human chromosome 15. (PMID: 16572171) Zody M.C. … Nusbaum C. (Nature 2006) 4 64
- Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3 64
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 64
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
Products for HERC2P3 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
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- Browse ELISpot/FluoroSpot Kits and Development Modules
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- Browse Immunoprecipitation Assays
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- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
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- Browse OriGene Antibodies
- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HERC2P3
- Origene Custom Protein Services for HERC2P3
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for HERC2P3
- Browse OriGene Inhibitory RNA Products For HERC2P3
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for HERC2P3
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For HERC2P3
- GenScript: Custom all cDNA clones Services for HERC2P3
- GenScript Custom Purified and Recombinant Proteins Services for HERC2P3
- GenScript Custom Assay Services for HERC2P3
- GenScript Custom overexpressing Cell Line Services for HERC2P3
- Browse GenScript CRISPR for HERC2P3
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for HERC2P3
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for HERC2P3
- VectorBuilder custom plasmid, inducible vectors for HERC2P3
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for HERC2P3
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for HERC2P3 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer