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Aliases for HERC2P2 Gene

Aliases for HERC2P2 Gene

  • Hect Domain And RLD 2 Pseudogene 2 2 3
  • D15F37S3 3
  • MN7 3

External Ids for HERC2P2 Gene

Previous GeneCards Identifiers for HERC2P2 Gene

  • GC15U990060
  • GC15M020836
  • GC15M023283

Summaries for HERC2P2 Gene

GeneCards Summary for HERC2P2 Gene

HERC2P2 (Hect Domain And RLD 2 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HERC2P2 Gene

Genomics for HERC2P2 Gene

Regulatory Elements for HERC2P2 Gene

Genomic Location for HERC2P2 Gene

Start:
22,494,837 bp from pter
End:
22,590,831 bp from pter
Size:
95,995 bases
Orientation:
Plus strand

Genomic View for HERC2P2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HERC2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HERC2P2 Gene

Proteins for HERC2P2 Gene

Post-translational modifications for HERC2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HERC2P2 Gene

Domains for HERC2P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HERC2P2 Gene

Function for HERC2P2 Gene

Molecular function for HERC2P2 Gene

GENATLAS Biochemistry: HECT domain and RLD2,pseudogene 2

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for HERC2P2 Gene

Localization for HERC2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HERC2P2 Gene

Pathways for HERC2P2 Gene

SuperPathways for HERC2P2 Gene

No Data Available

Interacting Proteins for HERC2P2 Gene

Gene Ontology (GO) - Biological Process for HERC2P2 Gene

None

No data available for Pathways by source for HERC2P2 Gene

Transcripts for HERC2P2 Gene

Unigene Clusters for HERC2P2 Gene

Hect domain and RLD 2 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HERC2P2 Gene

No ASD Table

Relevant External Links for HERC2P2 Gene

GeneLoc Exon Structure for
HERC2P2
ECgene alternative splicing isoforms for
HERC2P2

Expression for HERC2P2 Gene

mRNA expression in normal human tissues for HERC2P2 Gene

SOURCE GeneReport for Unigene cluster for HERC2P2 Gene Hs.458334

genes like me logo Genes that share expressions with HERC2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for HERC2P2 Gene

Orthologs for HERC2P2 Gene

Evolution for HERC2P2 Gene

ENSEMBL:
Gene Tree for HERC2P2 (if available)
TreeFam:
Gene Tree for HERC2P2 (if available)

No data available for Orthologs for HERC2P2 Gene

Paralogs for HERC2P2 Gene

No data available for Paralogs for HERC2P2 Gene

Variants for HERC2P2 Gene

Sequence variations from dbSNP and Humsavar for HERC2P2 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs9570 -- 22,590,554(-) AGAGA(A/G)AAGAA nc-transcript-variant
rs295707 -- 22,524,412(+) actgt(G/T)cctgg intron-variant
rs295727 -- 22,589,939(-) TCCTG(C/T)AGGGT intron-variant
rs295728 -- 22,589,425(+) ATTGG(A/C/G/T)CCCAG intron-variant
rs295731 -- 22,537,485(-) TACAA(A/G)TGTCA nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for HERC2P2 Gene

Variant ID Type Subtype PubMed ID
dgv44n16 CNV Insertion 17901297
nsv511042 OTHER Inversion 20534489
nsv433429 CNV Gain 18776910
nsv903495 CNV Gain 21882294
esv2474417 CNV Loss 19546169
nsv428297 CNV Gain+Loss 18775914
nsv832927 CNV Gain 17160897
nsv903573 CNV Gain 21882294
nsv832928 CNV Gain 17160897
dgv698e1 CNV Complex 17122850
dgv699e1 CNV Complex 17122850
esv28050 CNV Gain+Loss 19812545
nsv433430 CNV Gain 18776910
nsv832929 CNV Gain 17160897
dgv2249n71 CNV Gain 21882294
nsv903576 CNV Loss 21882294
nsv9189 CNV Gain+Loss 18304495
esv1010587 CNV Loss 20482838
dgv700e1 CNV Complex 17122850

Relevant External Links for HERC2P2 Gene

HapMap Linkage Disequilibrium report
HERC2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for HERC2P2 Gene

Disorders for HERC2P2 Gene

No disorders were found for HERC2P2 Gene.

No data available for UniProtKB/Swiss-Prot for HERC2P2 Gene

Publications for HERC2P2 Gene

  1. Expressed copies of the MN7 (D15F37) gene family map close to the common deletion breakpoints in the Prader-Willi/Angelman syndromes. (PMID: 9730612) Buiting K. … Horsthemke B. (Cytogenet. Cell Genet. 1998) 2 3
  2. The ancestral gene for transcribed, low-copy repeats in the Prader- Willi/Angelman region encodes a large protein implicated in protein trafficking, which is deficient in mice with neuromuscular and spermiogenic abnormalities. (PMID: 9949213) Ji Y. … Nicholls R.D. (Hum. Mol. Genet. 1999) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for HERC2P2 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate HERC2P2
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for HERC2P2
    • Block miRNA regulation of HERC2P2 using miScript Target Protectors

    Sources for HERC2P2 Gene

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