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HERC2P10 Gene(Pseudogene)

Hect Domain And RLD 2 Pseudogene 10

GCID:
GC15P030872
GIFtS:
18
Genes Participants
UDN Logo

Aliases for HERC2P10 Gene

Aliases for HERC2P10 Gene

  • Hect Domain And RLD 2 Pseudogene 10 2 3 5
  • WUGSC:H_DJ1086D14.1 3
  • H_DJ1086D14.1 3

External Ids for HERC2P10 Gene

Previous GeneCards Identifiers for HERC2P10 Gene

  • GC00U931405
  • GC15P031099
  • GC15P031101
  • GC15P031103
  • GC15P031105
  • GC15P031108
  • GC15P030816
  • GC15P030820
  • GC15P030829
  • GC15P030830
  • GC15P030858

Summaries for HERC2P10 Gene

GeneCards Summary for HERC2P10 Gene

HERC2P10 (Hect Domain And RLD 2 Pseudogene 10) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HERC2P10 Gene

Genomics for HERC2P10 Gene

Products:

  1. Regulatory Element

Regulatory Elements for HERC2P10 Gene

Enhancers for HERC2P10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G030988 1.6 Ensembl ENCODE dbSUPER 12.7 +175.3 175334 4.8 PKNOX1 FOXA2 WRNIP1 ARID4B SIN3A YY1 ZNF143 ZNF207 SP5 ZNF592 MTMR10 HERC2P10 TRPM1 RNU6-466P FAN1 ENSG00000260382 ENSG00000215302 GC15M030957
GH15G030903 1.4 ENCODE dbSUPER 12.7 +88.8 88820 1.7 HDGF HNRNPUL1 PKNOX1 CREB3L1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 HERC2P10 RNU6-466P MTMR10 FAN1 PIR52520
GH15G030971 0.9 dbSUPER 13 +158.1 158133 4.0 HDGF PKNOX1 ARID4B YY1 ZNF143 ZNF207 SP5 JUNB TBX21 GLIS1 HERC2P10 MTMR10 ENSG00000215302 GOLGA8Q GC15M030957
GH15G030970 0.9 dbSUPER 13 +157.5 157456 3.8 HDGF PKNOX1 ARNT ARID4B YY1 ZNF143 ZNF207 SP5 JUNB TBX21 HERC2P10 MTMR10 GOLGA8Q GC15M030957
GH15G030938 0.8 dbSUPER 13.6 +123.6 123642 1.3 HDGF USF1 PKNOX1 BACH1 ZBTB40 POLR2A EED ZNF207 RELB CREM MTMR10 HERC2P10 FAN1 ENSG00000270015 RNU6-466P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HERC2P10 on UCSC Golden Path with GeneCards custom track

Genomic Location for HERC2P10 Gene

Chromosome:
15
Start:
30,815,271 bp from pter
End:
30,844,153 bp from pter
Size:
28,883 bases
Orientation:
Plus strand

Genomic View for HERC2P10 Gene

Genes around HERC2P10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HERC2P10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HERC2P10 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HERC2P10 Gene

Proteins for HERC2P10 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for HERC2P10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HERC2P10 Gene

Domains & Families for HERC2P10 Gene

Suggested Antigen Peptide Sequences for HERC2P10 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for HERC2P10 Gene

Function for HERC2P10 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HERC2P10 Gene

Localization for HERC2P10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HERC2P10 Gene

Pathways & Interactions for HERC2P10 Gene

SuperPathways for HERC2P10 Gene

PathCards logo More details on SuperPathways for HERC2P10
No Data Available

Interacting Proteins for HERC2P10 Gene

Gene Ontology (GO) - Biological Process for HERC2P10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HERC2P10 Gene

Drugs & Compounds for HERC2P10 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for HERC2P10 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for HERC2P10 Gene

(1) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HERC2P10 Gene

Hect domain and RLD 2 pseudogene 10:
Representative Sequences:

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HERC2P10 Gene

No ASD Table

Relevant External Links for HERC2P10 Gene

GeneLoc Exon Structure for
HERC2P10
ECgene alternative splicing isoforms for
HERC2P10

Expression for HERC2P10 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HERC2P10 Gene

mRNA expression in normal human tissues for HERC2P10 Gene
mRNA expression by BioGPS for HERC2P10 GenemRNA expression by GTEx for HERC2P10 Gene

mRNA differential expression in normal tissues according to GTEx for HERC2P10 Gene

This gene is overexpressed in Testis (x9.7), Brain - Cerebellum (x5.8), Brain - Cerebellar Hemisphere (x5.3), and Pancreas (x4.7).

NURSA nuclear receptor signaling pathways regulating expression of HERC2P10 Gene:

HERC2P10

SOURCE GeneReport for Unigene cluster for HERC2P10 Gene:

Hs.721293
genes like me logo Genes that share expression patterns with HERC2P10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HERC2P10 Gene

Orthologs for HERC2P10 Gene

Evolution for HERC2P10 Gene

ENSEMBL:
Gene Tree for HERC2P10 (if available)
TreeFam:
Gene Tree for HERC2P10 (if available)

No data available for Orthologs for HERC2P10 Gene

Paralogs for HERC2P10 Gene

No data available for Paralogs for HERC2P10 Gene

Variants for HERC2P10 Gene

Sequence variations from dbSNP and Humsavar for HERC2P10 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1000251764 -- 30,817,956(+) GTGCA(A/G)GGCTT upstream-variant-2KB
rs1001257233 -- 30,824,031(+) CGGGC(A/G)GATCA intron-variant
rs1001603893 -- 30,823,796(+) CAGTG(A/T)TACAT intron-variant
rs1002073818 -- 30,819,439(+) CAGTC(-/TTTAA)TTTTA intron-variant
rs1002694014 -- 30,816,593(+) CAGGT(A/G)GTGGA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for HERC2P10 Gene

Variant ID Type Subtype PubMed ID
dgv2505n100 CNV loss 25217958
dgv2526n100 CNV loss 25217958
dgv2533n100 CNV loss 25217958
dgv4425n54 CNV gain 21841781
esv2760022 CNV gain+loss 17122850
esv3569376 CNV gain 25503493
esv3636036 CNV gain 21293372
esv3892647 CNV loss 25118596
nsv1046874 CNV gain 25217958
nsv1053014 CNV gain 25217958
nsv1148560 OTHER inversion 26484159
nsv456744 CNV gain 19166990
nsv525795 CNV gain 19592680
nsv832950 CNV gain 17160897
nsv984044 CNV duplication 23825009

Relevant External Links for HERC2P10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HERC2P10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HERC2P10 Gene

Disorders for HERC2P10 Gene

Relevant External Links for HERC2P10

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HERC2P10

No disorders were found for HERC2P10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HERC2P10 Gene

Publications for HERC2P10 Gene

No publications were found for HERC2P10 Gene.

Products for HERC2P10 Gene

Sources for HERC2P10 Gene

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