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Aliases for HECA Gene

Aliases for HECA Gene

  • Headcase Homolog (Drosophila) 2 3
  • HHDC 3 4
  • HDC 3 4
  • Headcase Protein Homolog 3
  • DJ225E12.1 3
  • HDCL 3

External Ids for HECA Gene

Previous GeneCards Identifiers for HECA Gene

  • GC06P139391
  • GC06P139436
  • GC06P139497
  • GC06P137017

Summaries for HECA Gene

Entrez Gene Summary for HECA Gene

  • This gene encodes the homolog of the Drosophila headcase protein, a highly basic, cytoplasmic protein that regulates the re-entry of imaginal cells into the mitotic cycle during adult morphogenesis. In Drosophila, the encoded protein also inhibits terminal branching of neighboring cells during tracheal development. [provided by RefSeq, Jul 2008]

GeneCards Summary for HECA Gene

HECA (Headcase Homolog (Drosophila)) is a Protein Coding gene. Diseases associated with HECA include lichen nitidus. Among its related pathways are Metabolism and Metabolism.

UniProtKB/Swiss-Prot for HECA Gene

  • May play an important role in some human cancers. May be part of the regulatory mechanism in the development of epithelial tube networks such as the circulatory system and lungs.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HECA Gene

Genomics for HECA Gene

Regulatory Elements for HECA Gene

Genomic Location for HECA Gene

Start:
139,135,112 bp from pter
End:
139,180,809 bp from pter
Size:
45,698 bases
Orientation:
Plus strand

Genomic View for HECA Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HECA Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HECA Gene

Proteins for HECA Gene

  • Protein details for HECA Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9UBI9-HDC_HUMAN
    Recommended name:
    Headcase protein homolog
    Protein Accession:
    Q9UBI9
    Secondary Accessions:

    Protein attributes for HECA Gene

    Size:
    543 amino acids
    Molecular mass:
    58837 Da
    Quaternary structure:
    No Data Available

neXtProt entry for HECA Gene

Proteomics data for HECA Gene at MOPED

Post-translational modifications for HECA Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for HECA Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for HECA Gene

Domains for HECA Gene

Protein Domains for HECA Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for HECA Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HECA: view

No data available for Gene Families and UniProtKB/Swiss-Prot for HECA Gene

Function for HECA Gene

Molecular function for HECA Gene

UniProtKB/Swiss-Prot Function: May play an important role in some human cancers. May be part of the regulatory mechanism in the development of epithelial tube networks such as the circulatory system and lungs.

Gene Ontology (GO) - Molecular Function for HECA Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
genes like me logo Genes that share ontologies with HECA: view

Phenotypes for HECA Gene

GenomeRNAi human phenotypes for HECA:
genes like me logo Genes that share phenotypes with HECA: view

Animal Model Products

CRISPR Products

miRNA for HECA Gene

miRTarBase miRNAs that target HECA

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for HECA

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for HECA Gene

Localization for HECA Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for HECA Gene COMPARTMENTS Subcellular localization image for HECA gene
Compartment Confidence
nucleus 3
cytosol 2
peroxisome 1

Gene Ontology (GO) - Cellular Components for HECA Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016020 membrane IDA 19946888
genes like me logo Genes that share ontologies with HECA: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for HECA Gene

Pathways for HECA Gene

genes like me logo Genes that share pathways with HECA: view

Pathways by source for HECA Gene

2 KEGG pathways for HECA Gene

Interacting Proteins for HECA Gene

STRING Interaction Network Preview (showing 3 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000356630%0d%0a9606.ENSP00000373873%0d%0a9606.ENSP00000293218%0d%0a9606.ENSP00000385269%0d%0a
Selected Interacting proteins: ENSP00000356630 Q9UBI9-HDC_HUMAN for HECA Gene via STRING I2D

Gene Ontology (GO) - Biological Process for HECA Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0030323 respiratory tube development NAS 11696983
genes like me logo Genes that share ontologies with HECA: view

Compounds for HECA Gene

(1) Novoseek inferred chemical compound relationships for HECA Gene

Compound -log(P) Hits PubMed IDs
histidine 49.5 3
genes like me logo Genes that share compounds with HECA: view

Transcripts for HECA Gene

mRNA/cDNA for HECA Gene

(128) Selected AceView cDNA sequences:
(4) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HECA Gene

Headcase homolog (Drosophila):
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for HECA

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for HECA

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HECA Gene

No ASD Table

Relevant External Links for HECA Gene

GeneLoc Exon Structure for
HECA
ECgene alternative splicing isoforms for
HECA

Expression for HECA Gene

mRNA expression in normal human tissues for HECA Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for HECA Gene

SOURCE GeneReport for Unigene cluster for HECA Gene Hs.197644

mRNA Expression by UniProt/SwissProt for HECA Gene

Q9UBI9-HDC_HUMAN
Tissue specificity: Expressed in all tissues examined. Highest levels are in the spleen, thymus, peripheral blood and heart. Lowest in the kidney and pancreas.
genes like me logo Genes that share expressions with HECA: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA differential expression in normal tissues for HECA Gene

Orthologs for HECA Gene

This gene was present in the common ancestor of animals.

Orthologs for HECA Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia HECA 35
  • 99.45 (n)
  • 99.63 (a)
HECA 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia HECA 35
  • 89.3 (n)
  • 95.38 (a)
HECA 36
  • 96 (a)
OneToOne
dog
(Canis familiaris)
Mammalia HECA 35
  • 89.67 (n)
  • 96.07 (a)
HECA 36
  • 97 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Heca 35
  • 87.91 (n)
  • 95.21 (a)
Heca 16
Heca 36
  • 94 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia HECA 36
  • 88 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Heca 35
  • 89.08 (n)
  • 96.87 (a)
chicken
(Gallus gallus)
Aves HECA 35
  • 81.39 (n)
  • 92.09 (a)
HECA 36
  • 92 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia HECA 36
  • 80 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.31027 35
tropical clawed frog
(Silurana tropicalis)
Amphibia heca 35
  • 71.9 (n)
  • 83.04 (a)
Str.19505 35
zebrafish
(Danio rerio)
Actinopterygii heca 35
  • 75.41 (n)
  • 80.89 (a)
heca 36
  • 72 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta hdc 36
  • 25 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea B0238.9 36
  • 18 (a)
OneToMany
cri-1 36
  • 27 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 37 (a)
OneToOne
Species with no ortholog for HECA:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for HECA Gene

ENSEMBL:
Gene Tree for HECA (if available)
TreeFam:
Gene Tree for HECA (if available)

Paralogs for HECA Gene

No data available for Paralogs for HECA Gene

Variants for HECA Gene

Sequence variations from dbSNP and Humsavar for HECA Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs8476 -- 139,180,204(+) AAAAG(G/T)TATTT utr-variant-3-prime
rs961782 -- 139,147,385(+) CTTTA(A/G)GAGGC intron-variant
rs961833 -- 139,150,973(-) ATCAG(G/T)CATGA intron-variant
rs1406818 -- 139,155,847(+) TTCAA(C/T)TACTC intron-variant
rs1406819 -- 139,155,901(+) TTTCA(A/G)CAAGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for HECA Gene

Variant ID Type Subtype PubMed ID
esv32697 CNV Gain 17666407

Relevant External Links for HECA Gene

HapMap Linkage Disequilibrium report
HECA

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for HECA Gene

Disorders for HECA Gene

MalaCards: The human disease database

MalaCards: The human disease database. (1) Diseases for HECA Gene including...

Search for HECA Gene in MalaCards »

(1) University of Copenhagen DISEASES for HECA Gene

(2) Novoseek inferred disease relationships for HECA Gene

Disease -log(P) Hits PubMed IDs
tumors 0 2
cancer 0 2

Relevant External Links for HECA

Genetic Association Database (GAD)
HECA
Human Genome Epidemiology (HuGE) Navigator
HECA
genes like me logo Genes that share disorders with HECA: view

No data available for UniProtKB/Swiss-Prot for HECA Gene

Publications for HECA Gene

  1. Isolation and characterization of the human gene homologous to the Drosophila headcase (hdc) gene in chromosome bands 6q23-q24, a region of common deletion in human pancreatic cancer. (PMID: 11696983) Makino N. … Horii A. (DNA Seq. 2001) 2 3 4 23
  2. The human homolog of the Drosophila headcase protein slows down cell division of head and neck cancer cells. (PMID: 19643820) Dowejko A. … Reichert T.E. (Carcinogenesis 2009) 2 3 23
  3. A homologue of the Drosophila headcase protein is a novel tumor marker for early-stage colorectal cancer. (PMID: 16525680) Chien C.C. … Huang C.J. (Oncol. Rep. 2006) 3 23
  4. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall A.J. … Beck S. (Nature 2003) 3 4
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4

Products for HECA Gene

Sources for HECA Gene

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