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Aliases for HEATR5A Gene

Aliases for HEATR5A Gene

  • HEAT Repeat Containing 5A 2 3 5
  • C14orf125 3 4
  • Chromosome 14 Open Reading Frame 125 2
  • HEAT Repeat-Containing Protein 5A 3
  • KIAA1316 4

External Ids for HEATR5A Gene

Previous HGNC Symbols for HEATR5A Gene

  • C14orf125

Previous GeneCards Identifiers for HEATR5A Gene

  • GC14M030833
  • GC14M031760
  • GC14M011878

Summaries for HEATR5A Gene

GeneCards Summary for HEATR5A Gene

HEATR5A (HEAT Repeat Containing 5A) is a Protein Coding gene. GO annotations related to this gene include binding. An important paralog of this gene is HEATR5B.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HEATR5A Gene

Genomics for HEATR5A Gene

Regulatory Elements for HEATR5A Gene

Enhancers for HEATR5A Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G031377 1.2 Ensembl ENCODE 17.4 +42.5 42472 1.3 HNRNPUL1 FOXA2 ATF1 MLX ARID4B DMAP1 TCF12 SLC30A9 SP5 ZHX2 HEATR5A LOC101927124 HECTD1 RNU6-541P NUBPL ENSG00000203546 ATP5G1P2
GH14G031261 1.7 FANTOM5 Ensembl ENCODE 10 +156.5 156497 5.5 PKNOX1 FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 YY1 SLC30A9 FOS ENSG00000203546 HECTD1 LOC101927124 HEATR5A DTD2 ENSG00000199291 GC14M031259 NARSP1
GH14G031388 0.8 ENCODE 18.3 +31.3 31285 2.0 ELF3 SOX13 FOXA2 EED FOSL2 NFE2 NR2F6 FOS IKZF2 HOMEZ HEATR5A ENSG00000203546 LOC101927124 HECTD1 AP4S1 DTD2 ATP5G1P2
GH14G031360 0.8 ENCODE 16.6 +59.4 59391 1.6 JUN ZFP64 BMI1 ZNF101 ZNF697 FOS ZNF433 MAFK NFE2L2 RFX1 HEATR5A LOC644295 LOC101927124 RNU6-541P HECTD1 ATP5G1P2
GH14G031440 1 Ensembl ENCODE 12.8 -21.5 -21510 2.2 TBP MXI1 JUN MAX RFX5 GTF3C2 E2F1 ZNF316 GATA3 RCOR1 ENSG00000203546 RPL21P5 HEATR5A LOC101927124 HECTD1 GC14P031438
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HEATR5A on UCSC Golden Path with GeneCards custom track

Promoters for HEATR5A Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000067222 582 2401 HNRNPUL1 MLX CREB3L1 AGO1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1

Genomic Location for HEATR5A Gene

Chromosome:
14
Start:
31,291,788 bp from pter
End:
31,420,582 bp from pter
Size:
128,795 bases
Orientation:
Minus strand

Genomic View for HEATR5A Gene

Genes around HEATR5A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HEATR5A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HEATR5A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HEATR5A Gene

Proteins for HEATR5A Gene

  • Protein details for HEATR5A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q86XA9-HTR5A_HUMAN
    Recommended name:
    HEAT repeat-containing protein 5A
    Protein Accession:
    Q86XA9
    Secondary Accessions:
    • Q68DD8
    • Q6P3S5
    • Q6P5R9
    • Q9H8D7
    • Q9NXB7
    • Q9P2N0
    • Q9UFQ3

    Protein attributes for HEATR5A Gene

    Size:
    2040 amino acids
    Molecular mass:
    222004 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAA91098.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

    Alternative splice isoforms for HEATR5A Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for HEATR5A Gene

Post-translational modifications for HEATR5A Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for HEATR5A Gene

No data available for DME Specific Peptides for HEATR5A Gene

Domains & Families for HEATR5A Gene

Protein Domains for HEATR5A Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for HEATR5A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q86XA9

UniProtKB/Swiss-Prot:

HTR5A_HUMAN :
  • Belongs to the HEATR5 family.
Family:
  • Belongs to the HEATR5 family.
genes like me logo Genes that share domains with HEATR5A: view

No data available for Gene Families for HEATR5A Gene

Function for HEATR5A Gene

genes like me logo Genes that share phenotypes with HEATR5A: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for HEATR5A Gene

Localization for HEATR5A Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for HEATR5A gene
Compartment Confidence
plasma membrane 3
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for HEATR5A Gene

Pathways & Interactions for HEATR5A Gene

SuperPathways for HEATR5A Gene

No Data Available

Gene Ontology (GO) - Biological Process for HEATR5A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HEATR5A Gene

Drugs & Compounds for HEATR5A Gene

No Compound Related Data Available

Transcripts for HEATR5A Gene

Unigene Clusters for HEATR5A Gene

HEAT repeat containing 5A:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HEATR5A Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13a · 13b ^ 14 ^ 15 ^ 16 ^ 17a · 17b ^ 18a · 18b · 18c ^ 19 ^ 20 ^
SP1: - -
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:

ExUns: 21 ^ 22 ^ 23 ^ 24a · 24b ^ 25 ^ 26a · 26b ^ 27a · 27b ^ 28a · 28b · 28c ^ 29 ^ 30
SP1:
SP2:
SP3:
SP4: -
SP5:
SP6:
SP7: -
SP8:

Relevant External Links for HEATR5A Gene

GeneLoc Exon Structure for
HEATR5A
ECgene alternative splicing isoforms for
HEATR5A

Expression for HEATR5A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HEATR5A Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for HEATR5A Gene

This gene is overexpressed in Testis (32.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for HEATR5A Gene



NURSA nuclear receptor signaling pathways regulating expression of HEATR5A Gene:

HEATR5A

SOURCE GeneReport for Unigene cluster for HEATR5A Gene:

Hs.744979
genes like me logo Genes that share expression patterns with HEATR5A: view

Primer Products

No data available for mRNA differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HEATR5A Gene

Orthologs for HEATR5A Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for HEATR5A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia HEATR5A 34 35
  • 99.69 (n)
dog
(Canis familiaris)
Mammalia HEATR5A 34 35
  • 91.43 (n)
cow
(Bos Taurus)
Mammalia HEATR5A 34 35
  • 90.3 (n)
rat
(Rattus norvegicus)
Mammalia Heatr5a 34
  • 84.74 (n)
mouse
(Mus musculus)
Mammalia Heatr5a 34 16 35
  • 84.24 (n)
oppossum
(Monodelphis domestica)
Mammalia HEATR5A 35
  • 5 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia HEATR5A 35
  • 5 (a)
OneToOne
chicken
(Gallus gallus)
Aves HEATR5A 34 35
  • 76.91 (n)
lizard
(Anolis carolinensis)
Reptilia HEATR5A 35
  • 5 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia heatr5a 34
  • 61.88 (n)
zebrafish
(Danio rerio)
Actinopterygii heatr5a 34 35
  • 61.43 (n)
fruit fly
(Drosophila melanogaster)
Insecta CG2747 35
  • 3 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea C13F10.4 35
  • 2 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes LAA1 35
  • 1 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 3 (a)
OneToMany
Species where no ortholog for HEATR5A was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for HEATR5A Gene

ENSEMBL:
Gene Tree for HEATR5A (if available)
TreeFam:
Gene Tree for HEATR5A (if available)

Paralogs for HEATR5A Gene

Paralogs for HEATR5A Gene

(1) SIMAP similar genes for HEATR5A Gene using alignment to 9 proteins:

genes like me logo Genes that share paralogs with HEATR5A: view

Variants for HEATR5A Gene

Sequence variations from dbSNP and Humsavar for HEATR5A Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs1000004204 -- 31,390,146(+) GATGC(C/T)AGGTG intron-variant
rs1000010828 -- 31,305,317(+) GAGTG(C/T)AATGG intron-variant
rs1000034357 -- 31,396,427(+) TGACA(A/G)AGCCA intron-variant
rs1000045138 -- 31,354,930(+) ATTTA(A/T)CACAA intron-variant
rs1000071081 -- 31,304,180(+) CTCCG(A/G)CCTAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for HEATR5A Gene

Variant ID Type Subtype PubMed ID
dgv1064n106 CNV deletion 24896259
esv1624128 CNV deletion 17803354
esv2241940 CNV deletion 18987734
esv2491965 CNV deletion 19546169
esv2664691 CNV deletion 23128226
esv2748558 CNV deletion 23290073
esv2748559 CNV deletion 23290073
esv3181106 CNV deletion 24192839
esv33189 CNV loss 17666407
esv3551323 CNV deletion 23714750
esv3551324 CNV deletion 23714750
esv3615 CNV loss 18987735
esv3633966 CNV loss 21293372
esv991558 CNV deletion 20482838
nsv1134364 CNV deletion 24896259
nsv1138285 CNV deletion 24896259
nsv1138286 CNV deletion 24896259
nsv1148157 CNV deletion 26484159
nsv499776 OTHER inversion 21111241
nsv7250 OTHER inversion 18451855
nsv84542 CNV deletion 16902084
nsv958738 CNV deletion 24416366
nsv974471 CNV duplication 23825009
nsv983811 CNV duplication 23825009

Variation tolerance for HEATR5A Gene

Gene Damage Index Score: 13.40; 95.43% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for HEATR5A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HEATR5A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for HEATR5A Gene

Disorders for HEATR5A Gene

Relevant External Links for HEATR5A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HEATR5A

No disorders were found for HEATR5A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HEATR5A Gene

Publications for HEATR5A Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  2. Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10718198) Nagase T. … Ohara O. (DNA Res. 2000) 3 4 64
  3. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64
  4. Panorama of ancient metazoan macromolecular complexes. (PMID: 26344197) Wan C. … Emili A. (Nature 2015) 3 64
  5. A human interactome in three quantitative dimensions organized by stoichiometries and abundances. (PMID: 26496610) Hein M.Y. … Mann M. (Cell 2015) 3 64

Products for HEATR5A Gene

Sources for HEATR5A Gene

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