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Aliases for HEATR5A Gene

Aliases for HEATR5A Gene

  • HEAT Repeat Containing 5A 2 3
  • C14orf125 3 4
  • Chromosome 14 Open Reading Frame 125 2
  • HEAT Repeat-Containing Protein 5A 3
  • KIAA1316 4

External Ids for HEATR5A Gene

Previous Symbols for HEATR5A Gene

  • C14orf125

Summaries for HEATR5A Gene

GeneCards Summary for HEATR5A Gene

HEATR5A (HEAT Repeat Containing 5A) is a Protein Coding gene. An important paralog of this gene is HEATR5B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HEATR5A Gene

Genomics for HEATR5A Gene

Genomic Location for HEATR5A Gene

Start:
31,291,788 bp from pter
End:
31,420,582 bp from pter
Size:
128,795 bases
Orientation:
Minus strand

Genomic View for HEATR5A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HEATR5A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HEATR5A Gene

Regulatory Elements for HEATR5A Gene

Proteins for HEATR5A Gene

  • Protein details for HEATR5A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q86XA9-HTR5A_HUMAN
    Recommended name:
    HEAT repeat-containing protein 5A
    Protein Accession:
    Q86XA9
    Secondary Accessions:
    • Q68DD8
    • Q6P3S5
    • Q6P5R9
    • Q9H8D7
    • Q9NXB7
    • Q9P2N0
    • Q9UFQ3

    Protein attributes for HEATR5A Gene

    Size:
    2040 amino acids
    Molecular mass:
    222004 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAA91098.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

    Alternative splice isoforms for HEATR5A Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for HEATR5A Gene

Proteomics data for HEATR5A Gene at MOPED

Post-translational modifications for HEATR5A Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for HEATR5A Gene

No data available for DME Specific Peptides for HEATR5A Gene

Domains for HEATR5A Gene

Protein Domains for HEATR5A Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for HEATR5A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q86XA9

UniProtKB/Swiss-Prot:

HTR5A_HUMAN
Family:
  • Belongs to the HEATR5 family.:
    • Q86XA9
Similarity:
  • Contains 2 HEAT repeats.:
    • Q86XA9
genes like me logo Genes that share domains with HEATR5A: view

No data available for Gene Families for HEATR5A Gene

Function for HEATR5A Gene

Gene Ontology (GO) - Molecular Function for HEATR5A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005488 binding --
genes like me logo Genes that share ontologies with HEATR5A: view
genes like me logo Genes that share phenotypes with HEATR5A: view

miRNA for HEATR5A Gene

miRTarBase miRNAs that target HEATR5A

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for HEATR5A Gene

Localization for HEATR5A Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for HEATR5A Gene COMPARTMENTS Subcellular localization image for HEATR5A gene
Compartment Confidence
plasma membrane 3
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for HEATR5A Gene

Pathways for HEATR5A Gene

SuperPathways for HEATR5A Gene

No Data Available

Interacting Proteins for HEATR5A Gene

Gene Ontology (GO) - Biological Process for HEATR5A Gene

None

No data available for Pathways by source for HEATR5A Gene

Transcripts for HEATR5A Gene

Unigene Clusters for HEATR5A Gene

HEAT repeat containing 5A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HEATR5A Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13a · 13b ^ 14 ^ 15 ^ 16 ^ 17a · 17b ^ 18a · 18b · 18c ^ 19 ^ 20 ^
SP1: - -
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:

ExUns: 21 ^ 22 ^ 23 ^ 24a · 24b ^ 25 ^ 26a · 26b ^ 27a · 27b ^ 28a · 28b · 28c ^ 29 ^ 30
SP1:
SP2:
SP3:
SP4: -
SP5:
SP6:
SP7: -
SP8:

Relevant External Links for HEATR5A Gene

GeneLoc Exon Structure for
HEATR5A
ECgene alternative splicing isoforms for
HEATR5A

Expression for HEATR5A Gene

mRNA expression in normal human tissues for HEATR5A Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for HEATR5A Gene

SOURCE GeneReport for Unigene cluster for HEATR5A Gene Hs.744979

genes like me logo Genes that share expressions with HEATR5A: view

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for HEATR5A Gene

Orthologs for HEATR5A Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for HEATR5A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia HEATR5A 35
  • 99.69 (n)
  • 99.41 (a)
HEATR5A 36
OneToOne
cow
(Bos Taurus)
Mammalia HEATR5A 35
  • 90.3 (n)
  • 92.76 (a)
HEATR5A 36
  • 5 (a)
OneToOne
dog
(Canis familiaris)
Mammalia HEATR5A 35
  • 91.43 (n)
  • 92.47 (a)
HEATR5A 36
  • 5 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Heatr5a 35
  • 84.24 (n)
  • 87.73 (a)
Heatr5a 16
Heatr5a 36
  • 5 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia HEATR5A 36
  • 5 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia HEATR5A 36
  • 5 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Heatr5a 35
  • 84.74 (n)
  • 88.28 (a)
chicken
(Gallus gallus)
Aves HEATR5A 35
  • 76.91 (n)
  • 80.03 (a)
HEATR5A 36
  • 4 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia HEATR5A 36
  • 5 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia heatr5a 35
  • 61.88 (n)
  • 61.71 (a)
zebrafish
(Danio rerio)
Actinopterygii heatr5a 35
  • 61.43 (n)
  • 63.69 (a)
heatr5a 36
  • 4 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG2747 36
  • 3 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea C13F10.4 36
  • 2 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes LAA1 36
  • 1 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 3 (a)
OneToMany
Species with no ortholog for HEATR5A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for HEATR5A Gene

ENSEMBL:
Gene Tree for HEATR5A (if available)
TreeFam:
Gene Tree for HEATR5A (if available)

Paralogs for HEATR5A Gene

Paralogs for HEATR5A Gene

Selected SIMAP similar genes for HEATR5A Gene using alignment to 9 proteins:

genes like me logo Genes that share paralogs with HEATR5A: view

Variants for HEATR5A Gene

Sequence variations from dbSNP and Humsavar for HEATR5A Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs727671 -- 31,342,329(+) GCTAC(C/T)GTGAG intron-variant
rs942907 -- 31,358,870(+) ATCTA(A/C)TCAAG intron-variant
rs1815318 -- 31,359,465(+) CTCAC(A/G)CCTGT intron-variant
rs1952105 -- 31,321,933(+) TTAAG(G/T)GTCCT intron-variant
rs2031437 -- 31,314,547(-) cggca(C/T)ggtag intron-variant

Structural Variations from Database of Genomic Variants (DGV) for HEATR5A Gene

Variant ID Type Subtype PubMed ID
esv33189 CNV Loss 17666407
nsv7250 OTHER Inversion 18451855
nsv901589 CNV Gain 21882294
nsv499776 OTHER Inversion 21111241
esv2491965 CNV Deletion 19546169
esv2241940 CNV Deletion 18987734
esv3615 CNV Deletion 18987735
esv2748558 CNV Deletion 23290073
esv991558 CNV Deletion 20482838
esv2664691 CNV Deletion 23128226
nsv84542 CNV Loss 16902084
esv1624128 CNV Deletion 17803354
esv2748559 CNV Deletion 23290073

Relevant External Links for HEATR5A Gene

HapMap Linkage Disequilibrium report
HEATR5A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for HEATR5A Gene

Disorders for HEATR5A Gene

No disorders were found for HEATR5A Gene.

No data available for UniProtKB/Swiss-Prot for HEATR5A Gene

Publications for HEATR5A Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10718198) Nagase T. … Ohara O. (DNA Res. 2000) 3 4
  3. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  5. Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level. (PMID: 21139048) Danielsen J.M. … Nielsen M.L. (Mol. Cell Proteomics 2011) 3

Products for HEATR5A Gene

Sources for HEATR5A Gene

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