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Aliases for HEATR4 Gene

Aliases for HEATR4 Gene

  • HEAT Repeat Containing 4 2 3 5

External Ids for HEATR4 Gene

Previous GeneCards Identifiers for HEATR4 Gene

  • GC14M073015
  • GC14M073946
  • GC14M054111

Summaries for HEATR4 Gene

GeneCards Summary for HEATR4 Gene

HEATR4 (HEAT Repeat Containing 4) is a Protein Coding gene. GO annotations related to this gene include binding.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HEATR4 Gene

Genomics for HEATR4 Gene

Regulatory Elements for HEATR4 Gene

Enhancers for HEATR4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F073711 0.6 ENCODE 16.8 -154.9 -154878 3.8 HDGF ATF1 ARID4B SIN3A DMAP1 ZNF48 YY1 ZNF143 KLF7 ZNF263 RBM25 ENSG00000258559 HEATR4 SUB1P2 RPS2P2 PNMA1 ELMSAN1 LOC100506476 PIR61365
GH14F073247 0.4 ENCODE 11.3 +311.1 311134 1.1 HDGF PKNOX1 ATF1 ARNT ARID4B SIN3A YBX1 DMAP1 ZNF48 ZNF143 HEATR4 PSEN1 DCAF4 RNU6-419P PIR32428
GH14F074488 1 Ensembl ENCODE 11.2 -930.5 -930506 2.3 TBP ARID4B SIN3A DMAP1 ZNF48 RARA GLIS2 GATA4 ZNF391 THAP11 ENSG00000259005 RPS2P2 SUB1P2 SYNDIG1L HEATR4 DPPA5P4 LOC105370571 LTBP2 NPC2 ISCA2
GH14F073632 0.5 ENCODE 9.1 -75.1 -75055 2.0 HDGF DMAP1 RAD21 ZBTB40 ETS1 YY1 GLIS2 ZNF143 ZNF654 USF2 ENSG00000258559 RBM25 PNMA1 PTGR2 ENSG00000223300 HEATR4 LOC100506476 ENSG00000258603 DNAL1
GH14F073325 1.3 Ensembl ENCODE 6.8 +232.5 232487 1.7 PRDM10 NUMB RNU6-419P LOC105370561 ACOT1 HEATR4 ENSG00000258944 GC14P073395
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HEATR4 on UCSC Golden Path with GeneCards custom track

Genomic Location for HEATR4 Gene

Chromosome:
14
Start:
73,478,484 bp from pter
End:
73,558,947 bp from pter
Size:
80,464 bases
Orientation:
Minus strand

Genomic View for HEATR4 Gene

Genes around HEATR4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HEATR4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HEATR4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HEATR4 Gene

Proteins for HEATR4 Gene

  • Protein details for HEATR4 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q86WZ0-HEAT4_HUMAN
    Recommended name:
    HEAT repeat-containing protein 4
    Protein Accession:
    Q86WZ0
    Secondary Accessions:
    • B7Z7V9
    • E9KL41

    Protein attributes for HEATR4 Gene

    Size:
    1026 amino acids
    Molecular mass:
    117175 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH47590.1; Type=Erroneous termination; Positions=39; Note=Translated as Glu.; Evidence={ECO:0000305};

neXtProt entry for HEATR4 Gene

Post-translational modifications for HEATR4 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for HEATR4 Gene

Domains & Families for HEATR4 Gene

Protein Domains for HEATR4 Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for HEATR4 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q86WZ0

UniProtKB/Swiss-Prot:

HEAT4_HUMAN :
  • Contains 3 HEAT repeats.
Similarity:
  • Contains 3 HEAT repeats.
genes like me logo Genes that share domains with HEATR4: view

No data available for Gene Families for HEATR4 Gene

Function for HEATR4 Gene

genes like me logo Genes that share phenotypes with HEATR4: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HEATR4 Gene

Localization for HEATR4 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for HEATR4 Gene COMPARTMENTS Subcellular localization image for HEATR4 gene
Compartment Confidence
nucleus 2
cytosol 1
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for HEATR4 Gene

Pathways & Interactions for HEATR4 Gene

SuperPathways for HEATR4 Gene

No Data Available

Interacting Proteins for HEATR4 Gene

Selected Interacting proteins: Q86WZ0-HEAT4_HUMAN for HEATR4 Gene via IID

Symbol External ID(s) Details
ESR2

Gene Ontology (GO) - Biological Process for HEATR4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HEATR4 Gene

Transcripts for HEATR4 Gene

Unigene Clusters for HEATR4 Gene

HEAT repeat containing 4:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HEATR4 Gene

ExUns: 1a · 1b ^ 2a · 2b · 2c ^ 3 ^ 4 ^ 5 ^ 6a · 6b · 6c · 6d · 6e ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^
SP1: - - - - - -
SP2: - - - -
SP3: - - - - -
SP4: - - -
SP5: - - -

ExUns: 20 ^ 21
SP1:
SP2:
SP3:
SP4:
SP5:

Relevant External Links for HEATR4 Gene

GeneLoc Exon Structure for
HEATR4
ECgene alternative splicing isoforms for
HEATR4

Expression for HEATR4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HEATR4 Gene

mRNA differential expression in normal tissues according to GTEx for HEATR4 Gene

This gene is overexpressed in Testis (x10.4).

Protein differential expression in normal tissues from HIPED for HEATR4 Gene

This gene is overexpressed in Adipocyte (60.4) and Heart (8.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for HEATR4 Gene



Protein tissue co-expression partners for HEATR4 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of HEATR4 Gene:

HEATR4

SOURCE GeneReport for Unigene cluster for HEATR4 Gene:

Hs.660774
genes like me logo Genes that share expression patterns with HEATR4: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for HEATR4 Gene

Orthologs for HEATR4 Gene

This gene was present in the common ancestor of chordates.

Orthologs for HEATR4 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia HEATR4 34 35
  • 99.12 (n)
cow
(Bos Taurus)
Mammalia HEATR4 34 35
  • 83.9 (n)
dog
(Canis familiaris)
Mammalia HEATR4 34 35
  • 83.74 (n)
rat
(Rattus norvegicus)
Mammalia RGD1566220 34
  • 74.17 (n)
mouse
(Mus musculus)
Mammalia LOC101055670 34
  • 73.58 (n)
Gm17673 35
  • 64 (a)
OneToOne
Heatr4 16
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 53 (a)
OneToMany
-- 35
  • 41 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia HEATR4 35
  • 50 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia HEATR4 35
  • 41 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia heatr4 34
  • 50.99 (n)
zebrafish
(Danio rerio)
Actinopterygii LOC796278 34
  • 52.64 (n)
HEATR4 35
  • 32 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 30 (a)
OneToMany
CSA.7366 35
  • 20 (a)
OneToMany
Species where no ortholog for HEATR4 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for HEATR4 Gene

ENSEMBL:
Gene Tree for HEATR4 (if available)
TreeFam:
Gene Tree for HEATR4 (if available)

Paralogs for HEATR4 Gene

No data available for Paralogs for HEATR4 Gene

Variants for HEATR4 Gene

Sequence variations from dbSNP and Humsavar for HEATR4 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs10047916 -- 73,620,031(+) CTCAG(A/C)CTCCC intron-variant, downstream-variant-500B
rs10083395 -- 73,528,279(+) aatcc(C/T)agcta intron-variant, upstream-variant-2KB
rs10129550 -- 73,560,121(+) ACAGA(G/T)ACAGA intron-variant, upstream-variant-2KB
rs10130899 -- 73,574,352(+) ctcca(A/C)ctccc intron-variant, reference, missense
rs10130934 -- 73,581,559(+) TGCAT(C/T)GAGCC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for HEATR4 Gene

Variant ID Type Subtype PubMed ID
dgv1102n106 CNV deletion 24896259
dgv1935n100 CNV gain 25217958
dgv21n47 CNV loss 21111241
dgv374n67 CNV loss 20364138
dgv375n67 CNV loss 20364138
dgv3760n54 CNV loss 21841781
dgv3761n54 CNV gain 21841781
dgv3762n54 CNV loss 21841781
dgv3763n54 CNV loss 21841781
dgv3764n54 CNV gain 21841781
dgv3765n54 CNV gain 21841781
dgv3766n54 CNV gain 21841781
dgv3767n54 CNV loss 21841781
dgv3768n54 CNV loss 21841781
dgv3769n54 CNV loss 21841781
dgv3770n54 CNV loss 21841781
dgv3771n54 CNV loss 21841781
dgv3772n54 CNV loss 21841781
dgv3773n54 CNV gain 21841781
dgv3774n54 CNV loss 21841781
dgv400e199 CNV deletion 23128226
dgv401e199 CNV deletion 23128226
dgv407e214 CNV gain 21293372
dgv653e212 CNV gain 25503493
dgv654e212 CNV loss 25503493
dgv655e212 CNV gain 25503493
dgv656e212 CNV gain 25503493
dgv657e212 CNV gain 25503493
dgv658e212 CNV gain 25503493
dgv659e212 CNV gain 25503493
dgv660e212 CNV loss 25503493
dgv661e212 CNV loss 25503493
dgv662e212 CNV loss 25503493
esv1006342 CNV deletion 20482838
esv2421969 OTHER complex 20811451
esv2518446 CNV loss 19546169
esv2561778 CNV deletion 19546169
esv2665379 CNV deletion 23128226
esv2672436 CNV deletion 23128226
esv2748865 CNV deletion 23290073
esv2748866 CNV deletion 23290073
esv2748867 CNV deletion 23290073
esv2759996 CNV gain 17122850
esv2760335 CNV gain+loss 21179565
esv2761566 CNV gain+loss 21179565
esv2904901 CNV deletion 24192839
esv29080 CNV gain+loss 19812545
esv29945 CNV loss 18421352
esv30006 CNV gain 17803354
esv33155 CNV gain+loss 17666407
esv3351007 CNV insertion 20981092
esv3423432 CNV duplication 20981092
esv3428529 CNV duplication 20981092
esv3551764 CNV deletion 23714750
esv3581287 CNV loss 25503493
esv3581298 CNV loss 25503493
esv3581301 CNV loss 25503493
esv3584669 CNV loss 24956385
esv3634908 CNV loss 21293372
esv3634909 CNV loss 21293372
esv3634910 CNV loss 21293372
esv3892561 CNV gain 25118596
esv990289 CNV loss 20482838
nsv1035460 CNV gain 25217958
nsv1053281 CNV gain 25217958
nsv1113661 CNV deletion 24896259
nsv1349 CNV insertion 18451855
nsv1350 CNV deletion 18451855
nsv428295 CNV gain 18775914
nsv436178 CNV deletion 17901297
nsv442687 CNV loss 18776908
nsv482172 CNV gain 20164927
nsv510643 CNV deletion 20534489
nsv514745 CNV gain 21397061
nsv514746 CNV gain 21397061
nsv514747 CNV gain+loss 21397061
nsv514748 CNV gain 21397061
nsv514749 CNV gain+loss 21397061
nsv514750 CNV gain+loss 21397061
nsv565110 CNV loss 21841781
nsv565111 CNV loss 21841781
nsv565124 CNV gain+loss 21841781
nsv565125 CNV gain 21841781
nsv565133 CNV gain 21841781
nsv565153 CNV loss 21841781
nsv565159 CNV loss 21841781
nsv565160 CNV loss 21841781
nsv565161 CNV loss 21841781
nsv565162 CNV loss 21841781
nsv819138 CNV loss 19587683
nsv821106 CNV deletion 20802225
nsv826976 CNV loss 20364138
nsv826978 CNV loss 20364138
nsv826979 CNV loss 20364138
nsv826981 CNV loss 20364138
nsv826985 CNV loss 20364138
nsv826987 CNV loss 20364138
nsv832828 CNV gain+loss 17160897
nsv9152 CNV gain+loss 18304495
nsv9153 CNV gain+loss 18304495
nsv952866 CNV deletion 24416366
nsv983843 CNV duplication 23825009

Variation tolerance for HEATR4 Gene

Residual Variation Intolerance Score: 90.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 5.86; 74.04% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for HEATR4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HEATR4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for HEATR4 Gene

Disorders for HEATR4 Gene

Relevant External Links for HEATR4

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HEATR4

No disorders were found for HEATR4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HEATR4 Gene

Publications for HEATR4 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 2 3 4 64
  2. Systematic mapping and functional analysis of a family of human epididymal secretory sperm-located proteins. (PMID: 20736409) Li J. … Liu Y. (Mol. Cell. Proteomics 2010) 3 4 64
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  4. An atlas of genetic influences on human blood metabolites. (PMID: 24816252) Shin S.Y. … Soranzo N. (Nat. Genet. 2014) 3 64
  5. Toward a confocal subcellular atlas of the human proteome. (PMID: 18029348) Barbe L. … Andersson-Svahn H. (Mol. Cell Proteomics 2008) 3 64

Products for HEATR4 Gene

Sources for HEATR4 Gene

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