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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

HDAC11 Gene

protein-coding   GIFtS: 61
GCID: GC03P013496

histone deacetylase 11

 Explore 10 diseases affiliated with
HDAC11 via our new
 Human Malady Compendium 
Biological research products
for HDAC11
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Histone Deacetylase 111 2
HD112 3
EC 3.5.1.983 8

External Ids:    HGNC: 190861   Entrez Gene: 798852   Ensembl: ENSG000001635177   OMIM: 6072265   UniProtKB: Q96DB23   

Export aliases for HDAC11 gene to outside databases

Previous GC identifer: GC03P013451


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for HDAC11:
This gene encodes a class IV histone deacetylase. The encoded protein is localized to the nucleus and may be involved
in regulating the expression of interleukin 10. Alternative splicing results in multiple transcript variants.(provided
by RefSeq, Apr 2009)

UniProtKB/Swiss-Prot: HDA11_HUMAN, Q96DB2
Function: Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B,
H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional
regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large
multiprotein complexes

summary for HDAC11:
Histone Deacetylases (HDACs) are a group of enzymes closely related to sirtuins. They catalyze the removal
of acetyl groups from lysine residues in histones and non-histone proteins, resulting in transcriptional
repression. In general, they do not act autonomously but as components of large multiprotein complexes, such
as pRb-E2F and mSin3A, that mediate important transcription regulatory pathways. There are three classes of
HDACs; classes 1, 2 and 4, which are closely related Zn2+-dependent enzymes. HDACs are ubiquitously
expressed and they can exist in the nucleus or cytosol. Their subcellular localization is effected by
protein-protein interactions (for example HDAC-14.3.3 complexes are retained in the cytosol) and by the
class to which they belong (class 1 HDACs are predominantly nuclear whilst class 2 HDACs shuttle between the
nucleus and cytosol). HDACs have a role in cell growth arrest, differentiation and death and this has led to
substantial interest in HDAC inhibitors as possible antineoplastic agents.

Gene Wiki entry for HDAC11


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000003.11  NC_018914.1  NT_022517.18  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the HDAC11 gene promoter:
         SREBP-1a   SREBP-1c   Lmo2   CUTL1   SREBP-1b   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidHDAC11 promoter sequence
   Search SABiosciences Chromatin IP Primers for HDAC11

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat HDAC11


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 3p25.1   Ensembl cytogenetic band:  3p25.1   HGNC cytogenetic band: 3p25.1

HDAC11 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
HDAC11 gene location

GeneLoc information about chromosome 3         GeneLoc Exon Structure

GeneLoc location for GC03P013496:  view genomic region     (about GC identifiers)

Start:
13,521,224 bp from pter      End:
13,547,924 bp from pter
Size:
26,701 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: HDA11_HUMAN, Q96DB2 (See protein sequence)
Recommended Name: Histone deacetylase 11  
Size: 347 amino acids; 39183 Da
Subunit: Interacts with HDAC6
Subcellular location: Nucleus. Note=Predominantly nuclear
Miscellaneous: Its activity is inhibited by trapoxin, a known histone deacetylase inhibitor
Sequence caution: Sequence=BAB15127.1; Type=Erroneous termination; Positions=107; Note=Translated as Gln;
Sequence=CAB70712.1; Type=Frameshift; Positions=177, 198, 200;
Secondary accessions: B4DDK1 Q9H6I7 Q9H6X3 Q9NTC9
Alternative splicing: 2 isoforms:  Q96DB2-1   Q96DB2-2   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for HDAC11: NX_Q96DB2

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q96DB2

  • 3 DME Specific Peptides for HDAC11 (Q96DB2)
     EKLHPFD  RGGGFCA  IIDLDAHQGNGHE 

    HDAC11 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_001129513.1  NP_079103.2  

    ENSEMBL proteins: 
     ENSP00000412514   ENSP00000295757   ENSP00000384706   ENSP00000384123   ENSP00000399792  
     ENSP00000385528   ENSP00000385475   ENSP00000405403   ENSP00000385252   ENSP00000384019  
     ENSP00000429794   ENSP00000411792   ENSP00000398651   ENSP00000402298   ENSP00000396122  
     ENSP00000395188   ENSP00000401487  
    Reactome Protein details: Q96DB2
    Human Recombinant Protein Products: 
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    Uscn Proteins for HDAC11

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000118histone deacetylase complex IDA11948178
    GO:0005634nucleus IDA11948178
    GO:0005886plasma membrane IDA--


    HDAC11 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for HDAC11


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    HDAC11 for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR000286 His_deacetylse
     IPR023801 His_deacetylse_dom

    Graphical View of Domain Structure for InterPro Entry Q96DB2

    ProtoNet protein and cluster: Q96DB2

    1 Blocks protein family: IPB000286 Histone deacetylase superfamily signature

    UniProtKB/Swiss-Prot: HDA11_HUMAN, Q96DB2
    Similarity: Belongs to the histone deacetylase family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: HDA11_HUMAN, Q96DB2
    Function: Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B,
    H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional
    regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large
    multiprotein complexes
    Catalytic activity: Hydrolysis of an N(6)-acetyl-lysine residue of a histone to yield a deacetylated histone

    Enzyme Number (IUBMB): EC 3.5.1.981 2

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    Gene Ontology (GO): 5/8 molecular function terms (GO ID links to tree view) (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004407histone deacetylase activity IDA11948178
    GO:0005515protein binding ----
    GO:0008134transcription factor binding TAS12711221
    GO:0016787hydrolase activity ----
    GO:0032041NAD-dependent histone deacetylase activity (H3-K14 specific) IEA--


    HDAC11 for ontologies           About GeneDecksing


    2 GenomeRNAi human phenotypes for HDAC11:
     G0/1 arrest  Increased G1 DNA content 


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/20 super-pathways (see all 20About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Signaling by NOTCH1 t(7 9)(NOTCH1:M1580_K2555) Translocation Mutant
    8/12 pathways (see all 12)
    Signaling by NOTCH1 t(7 9)(NOTCH1:M1580_K2555) Translocation Mutant1.00
    Signaling by NOTCH11.00
    Signaling by NOTCH1 PEST Domain Mutants in Cancer1.00
    Constitutive Signaling by NOTCH1 PEST Domain Mutants0.79
    Signaling by NOTCH1 HD+PEST Domain Mutants in Cancer1.00
    Signaling by NOTCH0.77
    Signaling by NOTCH1 in Cancer1.00
    Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants0.71
    2DNA Methylation and Transcriptional Repression
    DNA Methylation and Transcriptional Repression1.00
    Macrophage Differentiation and Growth Inhibition by METS0.30
    3Cyclins and Cell Cycle Regulation
    Cyclins and Cell Cycle Regulation1.00
    G1-S Phase Transition0.67
    4Disease
    Disease1.00
    5Valproic Acid Pathway, Pharmacodynamics
    Valproic Acid Pathway, Pharmacodynamics1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for HDAC11
        Histone modification

    5/15 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for HDAC11 (see all 15)
        DNA Methylation and Transcriptional Repression
    Protein Acetylation and Deacetylation
    BRCA1 Pathway
    Glucocorticoid Receptor Signaling
    Intracellular Calcium Signaling

    3 BioSystems Pathways for HDAC11 
        Neural Crest Differentiation
    Signaling events mediated by HDAC Class I
    Signaling events mediated by HDAC Class II

    5/13        Reactome Pathways for HDAC11 (see all 13)
        Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants
    NOTCH1 Intracellular Domain Regulates Transcription
    Signaling by NOTCH
    FBXW7 Mutants and NOTCH1 in Cancer
    Signaling by NOTCH1 HD Domain Mutants in Cancer

    1 PharmGKB Pathway for HDAC11
        Valproic Acid Pathway, Pharmacodynamics


    HDAC11 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for HDAC11

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/52 Interacting proteins for HDAC11 (Q96DB22, 3 ENSP000002957574) via UniProtKB, MINT, STRING, and/or I2D (see all 52)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    NELFCDQ8IXH72, 3MINT-64861 I2D: score=5 
    MAPK6Q166592, 3MINT-8261230 I2D: score=2 
    HDAC6Q9UBN73, ENSP000003340614I2D: score=3 STRING: ENSP00000334061
    GSCP569153, ENSP000002385584I2D: score=1 STRING: ENSP00000238558
    CDT1Q9H2113, ENSP000003010194I2D: score=1 STRING: ENSP00000301019
    About this table

    Gene Ontology (GO): 5 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006355regulation of transcription, DNA-dependent IEA--
    GO:0014003oligodendrocyte development IEA--
    GO:0016568chromatin modification TAS12711221
    GO:0016575histone deacetylation IDA11948178


    HDAC11 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    EMD Millipore small molecules for HDAC11:
    Small Molecule - inhibitor
    Browse drugs & compounds from Enzo Life Sciences

    Compounds for HDAC11 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    NCH 51Histone deacetylase inhibitor[848354-66-5]
    SplitomicinSir2p inhibitor[5690-03-9]
    Trichostatin AHistone deacetylase inhibitor[58880-19-6]
    KD 5170Histone deacetylase inhibitor[940943-37-3]
    Sodium 4-PhenylbutyrateHistone deacetylase inhibitor[1716-12-7]
    Search CenterWatch for drugs/clinical trials and news about HDAC11 / HDA11 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for HDAC11 gene (2 alternative transcripts): 
    NM_001136041.2  NM_024827.3  

    Unigene Cluster for HDAC11:

    Histone deacetylase 11
    Hs.744132  [show with all ESTs]
    Unigene Representative Sequence: NM_024827
    18/21 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 21):
    ENST00000433119 ENST00000295757(uc010heb.3 uc003bxy.3 uc011aux.2 uc011auy.2)
    ENST00000402259 ENST00000402271 ENST00000425430 ENST00000404548 ENST00000404040
    ENST00000458642 ENST00000405478 ENST00000405025 ENST00000475818 ENST00000522202
    ENST00000418189 ENST00000434848 ENST00000416248 ENST00000455904 ENST00000437379
    ENST00000487585

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    Additional cDNA sequence: 

    AK025426.1 AK025890.1 AK293223.1 AK299021.1 AL137362.1 AL834223.1 BC009676.1 CR457341.1 

    13 DOTS entries:

    DT.91669209  DT.120886461  DT.409141  DT.95177429  DT.91974866  DT.99979461  DT.102828195  DT.120886446 
    DT.95095163  DT.97778414  DT.99970847  DT.100779660  DT.120886452 

    24/135 AceView cDNA sequences (see all 135):

    BF195399 NM_024827 AK025426 BC009676 AL134619 BE856419 AA864367 BF739861 
    AL551256 CD515668 BM671310 AI889025 BQ928115 BF194759 AL834223 BF365978 
    BI520504 CR603019 CR612266 AI360857 AI672275 AW293412 BP375242 BG249632 

    GeneLoc Exon Structure

    5/13 Alternative Splicing Database (ASD) splice patterns (SP) for HDAC11 (see all 13)    About this scheme

    ExUns: 1 ^ 2a · 2b · 2c ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7 ^ 8a · 8b · 8c ^ 9 ^ 10 ^ 11 ^ 12a · 12b ^ 13a · 13b ^ 14 ^ 15a · 15b · 15c · 15d
    SP1:                                                        -                                   -           -           -                                 
    SP2:                          -     -     -                 -                                   -           -                                             
    SP3:                                      -                 -                                   -           -                                             
    SP4:                          -     -     -                 -     -     -     -     -     -     -           -           -                                 
    SP5:                                      -                 -                                   -                                                         


    ECgene alternative splicing isoforms for HDAC11

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    HDAC11 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GGATTTGCTG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See HDAC11 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for HDAC11

    SOURCE GeneReport for Unigene cluster: Hs.744132

    UniProtKB/Swiss-Prot: HDA11_HUMAN, Q96DB2
    Tissue specificity: Weakly expressed in most tissues. Strongly expressed in brain, heart, skeletal muscle, kidney and
    testis

        SABiosciences Expression via Pathway-Focused PCR Arrays including HDAC11: 
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              Cancer Drug Targets in human mouse rat

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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for HDAC11 gene from 7/22 species (see all 22)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves HDAC111 histone deacetylase 11 69.25(n)
    79.76(a)
      415978  XM_414321.3  XP_414321.2 
    lizard
    (Anolis carolinensis)
    Reptilia --
    HDAC116
    --

    78(a)
    possible ortholog
    1 ↔ 1
    6(28325300-28366358)
    2(189308869-189326936)
    zebrafish
    (Danio rerio)
    Actinopterygii hdac111 histone deacetylase 11 69.09(n)
    74.71(a)
      431718  NM_001002171.1  NP_001002171.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta HdacX1 Histone deacetylase X 56.31(n)
    52.75(a)
      326120  NM_170173.3  NP_733048.1 
    worm
    (Caenorhabditis elegans)
    Secernentea hda-111 Protein HDA-11 50.97(n)
    50(a)
      183226  NM_073298.3  NP_505699.3 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons HDA21 histone deacetylase 2 56.67(n)
    59.06(a)
      832673  NM_122505.3  NP_568480.2 
    rice
    (Oryza sativa)
    Liliopsida Os06g05711001 hypothetical protein 58.88(n)
    57.94(a)
      4341352  NM_001064449.1  NP_001057914.1 


    ENSEMBL Gene Tree for HDAC11 (if available)
    TreeFam Gene Tree for HDAC11 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/468 NCBI SNPs in HDAC11 are shown (see all 468    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 3 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1115165021,2
    F,--13519838(+) AGGATA/C/TGCTTG 1 -- us2k12CSA 4
    rs1882213981,2
    --13519846(+) TTGAGC/GCCAGG 2 -- us2k10--------
    rs26552171,2
    C,F,A,H,--13519938(+) CTTATC/TCAGAC 2 -- us2k133Minor allele frequency- T:0.24NS EA NA WA CSA 3200
    rs1381326371,2
    --13519969(+) TCAGCC/TTCAGG 2 -- us2k10--------
    rs747223011,2
    --13519974(+) TTCAGA/GTCCAG 2 -- us2k10--------
    rs1438816071,2
    --13520270(+) AAAAGC/TATTTG 2 -- us2k10--------
    rs748949441,2
    F,--13520273(+) AGCATT/CTGGAC 2 -- us2k11Minor allele frequency- C:0.02WA 118
    rs1482030071,2
    --13520306(+) GGTCTC/GTGAAT 2 -- us2k10--------
    rs1918631571,2
    --13520314(+) AATAAC/TAATCA 2 -- us2k10--------
    rs783750981,2
    F,--13520375(+) AAGTGC/TAACCA 2 -- us2k11Minor allele frequency- T:0.07NA 120

    HapMap Linkage Disequilibrium report for HDAC11 (13521224 - 13547924 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for HDAC11: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing HDAC11
    DNA2.0 Custom Variant and Variant Library Synthesis for HDAC11

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    HDAC11 for disorders           About GeneDecksing

    OMIM gene information: 607226    OMIM disorders: --

    10 diseases for HDAC11:    About MalaCards
    meckel's diverticulum    paratyphoid fever    amyotrophic lateral sclerosis    lateral sclerosis
    inflammatory diarrhea    hodgkin's lymphoma    diarrhea    breast cancer
    pancreatitis    huntington's disease

    1 disease from the University of Copenhagen DISEASES database for HDAC11:
    Hodgkin's lymphoma

    Export disorders for HDAC11 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for HDAC11 gene, integrated from 9 sources (see all 29):
    (articles sorted by number of sources associating them with HDAC11)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Cloning and functional characterization of HDAC11, a novel member of the human histone deacetylase family. (PubMed id 11948178)1, 2, 3 Gao L.... Atadja P. (2002)
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    4. Mutational analyses of WNT7A and HDAC11 as candidate tumour suppressor genes in sporadic malignant pancreatic endocrine tumours. (PubMed id 17201809)1, 9 Lindberg D....Westin G. (2007)
    5. Functional dissection of lysine deacetylases reveals t hat HDAC1 and p300 regulate AMPK. (PubMed id 22318606)1 Lin Y.Y....Boeke J.D. (2012)
    6. Increased gene expression of histone deacetylases in p atients with Philadelphia-negative chronic myeloproliferative neoplasms. (PubMed id 21806350)1 Skov V....Hasselbalch H.C. (2012)
    7. A directed protein interaction network for investigat ing intracellular signal transduction. (PubMed id 21900206)1 Vinayagam A....Wanker E.E. (2011)
    8. Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983)1 Kim W....Gygi S.P. (2011)
    9. HDAC11 plays an essential role in regulating OX40 lig and expression in Hodgkin lymphoma. (PubMed id 21239696)1 Buglio D....Younes A. (2011)
    10. Chromatin unfolding by Cdt1 regulates MCM loading via opposing functions of HBO1 and HDAC11-geminin. (PubMed id 20980834)1 Wong P.G....Alexandrow M. (2010)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 79885 HGNC: 19086 AceView: HDAC11 Ensembl:ENSG00000163517 euGenes: HUgn79885
    ECgene: HDAC11 H-InvDB: HDAC11

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for HDAC11 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for HDAC11 gene:
    Search GeneIP for patents involving HDAC11

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
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    Advanced Cell Diagnostics
    About This Section

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