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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

HCST Gene

protein-coding   GIFtS: 52
GCID: GC19P036393

hematopoietic cell signal transducer

(Previous name: phosphoinositide-3-kinase adaptor protein )
(Previous symbol: PIK3AP)
 Explore 6 diseases affiliated with
HCST via our new
 Human Malady Compendium 
Biological research products
for HCST
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Hematopoietic Cell Signal Transducer1 2     Transmembrane Adapter Protein KAP102 3
DAP101 2 3 5     DNAX-Activation Protein 102 3
KAP101 2 3     DKFZP586C15221
PIK3AP1 2 3     Kinase Assoc Pro Of ~10kDa2
Phosphoinositide-3-Kinase Adaptor Protein1 2     Kinase Assoc Protein2
Membrane Protein DAP102 3     

External Ids:    HGNC: 169771   Entrez Gene: 108702   Ensembl: ENSG000001262647   OMIM: 6040895   UniProtKB: Q9UBK53   

Export aliases for HCST gene to outside databases

Previous GC identifers: GC00U912965 GC19P041085 GC19P032898


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for HCST:
This gene encodes a transmembrane signaling adaptor that contains a YxxM motif in its cytoplasmic domain. The encoded
protein may form part of the immune recognition receptor complex with the C-type lectin-like receptor NKG2D. As part
of this receptor complex, this protein may activate phosphatidylinositol 3-kinase dependent signaling pathways through
its intracytoplasmic YxxM motif. This receptor complex may have a role in cell survival and proliferation by
activation of NK and T cell responses. Alternative splicing results in two transcript variants encoding different
isoforms. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: HCST_HUMAN, Q9UBK5
Function: Transmembrane adapter protein which associates with NKG2D to form an activation receptor NKG2D-HCST in
lymphoid and myeloid cells; this receptor plays a major role in triggering cytotoxicity against target cells
expressing cell surface ligands such as MHC class I chain-related MICA and MICB, and UL16-binding proteins (ULBPs);
these ligands are up-regulated by stress conditions and pathological state such as viral infection and tumor
transformation. Functions as docking site for PI3-kinase PIK3R1 and GRB2. Interaction of ULBPs with NKG2D-DAP10
triggers calcium mobilization and activation of the PIK3R1, MAP2K/ERK, and JAK2/STAT5 signaling pathways. Both PIK3R1
and GRB2 are required for full NKG2D-HCST-mediated activation and ultimate killing of target cells. In NK cells,
NKG2D-HCST signaling directly induces cytotoxicity and enhances cytokine production initiated via
DAP12/TYROBP-associated receptors. In T-cells, it provides primarily costimulation for TCR-induced signals. NKG2D-HCST
receptor plays a role in immune surveillance against tumors and is required for cytolysis of tumors cells; indeed,
melanoma cells that do not express NKG2D ligands escape from immune surveillance mediated by NK cells

Gene Wiki entry for HCST


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000019.9  NC_018930.1  NT_011109.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the HCST gene promoter:
         AML1a   Tal-1   HSF1 (long)   Gfi-1   C/EBPalpha   E47   c-Ets-1   SEF-1 (1)   HSF1short   Pax-4a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidHCST promoter sequence
   Search SABiosciences Chromatin IP Primers for HCST

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat HCST


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 19q13.1   Ensembl cytogenetic band:  19q13.12   HGNC cytogenetic band: 19q13.1

HCST Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
HCST gene location

GeneLoc information about chromosome 19         GeneLoc Exon Structure

GeneLoc location for GC19P036393:  view genomic region     (about GC identifiers)

Start:
36,393,382 bp from pter      End:
36,395,279 bp from pter
Size:
1,898 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: HCST_HUMAN, Q9UBK5 (See protein sequence)
Recommended Name: Hematopoietic cell signal transducer precursor  
Size: 93 amino acids; 9489 Da
Subunit: Interacts with CLEC5A (By similarity). Forms an CLEC5A/TYROBP/HCST trimolecular complex depending almost
solely on TYROBP (By similarity). Homodimer; Disulfide-linked. Interacts with NKG2D to form a stable complex, which
results in surface expression of both proteins, whereas alone, it is minimally expressed. Interacts with PIK3R1 and
GRB2
Subcellular location: Membrane; Single-pass type I membrane protein
Miscellaneous: Silencing of HCST suppresses cytolytic activity of T-cells and NK cells
Secondary accessions: Q9UBS1 Q9Y3Y0
Alternative splicing: 2 isoforms:  Q9UBK5-1   Q9UBK5-2   

Explore the universe of human proteins at neXtProt for HCST: NX_Q9UBK5

Post-translational modifications:

  • Phosphorylated; PIK3R1 and GRB2 associate specifically with tyrosine-phosphorylated HCST1
  • O-glycosylated1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9UBK5

  • HCST Protein expression data from MOPED and PaxDb:    About this image 
    HCST Protein Expression
    REFSEQ proteins (2 alternative transcripts): 
    NP_001007470.1  NP_055081.1  

    ENSEMBL proteins: 
     ENSP00000246551   ENSP00000400516  
    Reactome Protein details: Q9UBK5
    Human Recombinant Protein Products for HCST: 
    Browse Purified and Recombinant Proteins at EMD Millipore
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    OriGene Purified Protein: HCST
    OriGene Protein Over-expression Lysate (see all 2): HCST
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    GenScript Custom Purified and Recombinant Proteins Services for HCST
    Novus Biologicals HCST Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for HCST

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005886plasma membrane TAS--
    GO:0016021integral to membrane IEA--

    HCST for ontologies           About GeneDecksing



    HCST Antibody Products: 
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    ThermoFisher Antibodies for HCST

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    Uscn ELISAs and CLIAs for HCST


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    HCST for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR009861 DAP10

    Graphical View of Domain Structure for InterPro Entry Q9UBK5

    ProtoNet protein and cluster: Q9UBK5

    UniProtKB/Swiss-Prot: HCST_HUMAN, Q9UBK5
    Similarity: Belongs to the DAP10 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: HCST_HUMAN, Q9UBK5
    Function: Transmembrane adapter protein which associates with NKG2D to form an activation receptor NKG2D-HCST in
    lymphoid and myeloid cells; this receptor plays a major role in triggering cytotoxicity against target cells
    expressing cell surface ligands such as MHC class I chain-related MICA and MICB, and UL16-binding proteins (ULBPs);
    these ligands are up-regulated by stress conditions and pathological state such as viral infection and tumor
    transformation. Functions as docking site for PI3-kinase PIK3R1 and GRB2. Interaction of ULBPs with NKG2D-DAP10
    triggers calcium mobilization and activation of the PIK3R1, MAP2K/ERK, and JAK2/STAT5 signaling pathways. Both PIK3R1
    and GRB2 are required for full NKG2D-HCST-mediated activation and ultimate killing of target cells. In NK cells,
    NKG2D-HCST signaling directly induces cytotoxicity and enhances cytokine production initiated via
    DAP12/TYROBP-associated receptors. In T-cells, it provides primarily costimulation for TCR-induced signals. NKG2D-HCST
    receptor plays a role in immune surveillance against tumors and is required for cytolysis of tumors cells; indeed,
    melanoma cells that do not express NKG2D ligands escape from immune surveillance mediated by NK cells
    Induction: By T-cell receptor (TCR) ligation, which leads to enhanced NKG2D-HCST cell surface expression.
    Down-regulated by IL21/interleukin-21 in T-cells and NK cells

         Gene Ontology (GO): 1 molecular function term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding ----
         
    HCST for ontologies           About GeneDecksing


    Phenotypes:
         10 MGI mutant phenotypes (inferred from 4 alleles(MGI details for Hcst):
     cellular  embryogenesis  hematopoietic system  homeostasis/metabolism  immune system 
     mortality/aging  no phenotypic analysis  reproductive system  skeleton  tumorigenesis 

    HCST for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-outs for HCST: Hcst/TyrobpHcst/tm1Ttk Hcsttm1.1Cln Hcsttm1.1Dnax Hcsttm1Cln
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for HCST 

    miRNA
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    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat HCST
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    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
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    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for HCST (see all 7)
    OriGene shRNA RFP: HCST
    OriGene siRNA: HCST
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    Sirion Biotech Custom design and validation of potent shRNA sequences against HCST 

    Gene Editing
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    Sirion Biotech Customized adenovirus for overexpression of HCST 
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    Clone
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    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): HCST (NM_014266)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for HCST
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat HCST 

    Cell Line
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    Sirion Biotech Customized inducible overexpressing cell line services for HCST

    In Situ Assay
    Products:
       

     
    Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for HCST


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Immune System
    Immune System1.00
    Adaptive Immune System0.59
    2Natural killer cell mediated cytotoxicity
    Natural killer cell mediated cytotoxicity1.00
    3Cleavage of Alpha-1-Microglobulin
    Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell0.30

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    3        Reactome Pathways for HCST
        Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
    Adaptive Immune System
    Immune System


    1         Kegg Pathway  (Kegg details for HCST):
        Natural killer cell mediated cytotoxicity


    HCST for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for HCST

    STRING Interaction Network Preview (showing 5 interactants - click image to see 17)

    5/19 Interacting proteins for HCST (Q9UBK53 ENSP000002465514) via UniProtKB, MINT, STRING, and/or I2D (see all 19)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    KLRK1P267183, ENSP000002406184I2D: score=4 STRING: ENSP00000240618
    PIK3R1P279863, ENSP000002743354I2D: score=1 STRING: ENSP00000274335
    SPOPO437913, ENSP000002403274I2D: score=1 STRING: ENSP00000240327
    IL2RBP147843I2D: score=1 
    IL2RGP317853I2D: score=1 
    About this table

    Gene Ontology (GO): 1 biological process term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0050776regulation of immune response TAS--

    HCST for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    HCST for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for HCST

    1 HMDB Compound for HCST    About this table
    CompoundSynonyms CAS #PubMed Ids
    CalciumCa (see all 2)7440-70-2--
    2 Novoseek chemical compound relationships for HCST gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    phosphatidylinositol 50.2 3 15048706 (1), 12591902 (1)
    lysine 35.1 1 17483134 (1)

    Search CenterWatch for drugs/clinical trials and news about HCST 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for HCST gene (2 alternative transcripts): 
    NM_001007469.1  NM_014266.3  

    Unigene Cluster for HCST:

    Hematopoietic cell signal transducer
    Hs.117339  [show with all ESTs]
    Unigene Representative Sequence: CD049497
    2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000246551(uc002ocl.1) ENST00000437550(uc002ock.1)

    miRNA
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    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat HCST
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    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
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    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for HCST (see all 7)
    OriGene shRNA RFP: HCST
    OriGene siRNA: HCST
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat HCST
    Sirion Biotech Custom design and validation of potent shRNA sequences against HCST 
    Clone
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    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for HCST (see all 5)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for HCST (see all 2)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): HCST (NM_014266)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for HCST
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat HCST 
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat HCST
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat HCST

    Additional cDNA sequence: 

    AF072844.1 AF122904.1 AF172929.1 AF285447.1 AL050163.1 AY359058.1 BC035931.1 BC046348.1 
    BC065224.1 

    5 DOTS entries:

    DT.310625  DT.92417866  DT.95239707  DT.121425007  DT.92326850 

    24/39 AceView cDNA sequences (see all 39):

    AI148117 AJ714110 AI357959 NM_014266 BC065224 BP431547 BC035931 AI308984 
    AA903621 AA937996 AL050163 AA894359 BI753833 AF072844 AA699808 AI141733 
    AJ713188 BC046348 AI582746 AF285447 AY359058 AA973777 AA829607 AA309780 

    GeneLoc Exon Structure

    2 Alternative Splicing Database (ASD) splice patterns (SP) for HCST    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4
    SP1:                              
    SP2:                              


    ECgene alternative splicing isoforms for HCST

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    HCST expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CCAGGCAGGG
    HCST Expression
    About this image
    See HCST Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for HCST

    SOURCE GeneReport for Unigene cluster: Hs.117339

    UniProtKB/Swiss-Prot: HCST_HUMAN, Q9UBK5
    Tissue specificity: Predominantly expressed in hemopoietic cells such as NK cells, subset of T-cells and monocytes.
    Detected in leukocytes, spleen, and thymus

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    In Situ
    Assay Products:
     

     
    Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for HCST

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of human and mouse.

    Orthologs for HCST gene from 1/5 species (see all 5)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Hcst1 , 5 hematopoietic cell signal transducer1, 5 80(n)1
    81.33(a)1
      7 (17.45 cM)5
    239001  NM_011827.31  NP_035957.21 
     304177175 


    ENSEMBL Gene Tree for HCST (if available)
    TreeFam Gene Tree for HCST (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/65 NCBI SNPs in HCST are shown (see all 65    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 19 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1439941991,2
    --36391625(+) CTGGGC/GTCCAG 3 -- us2k10--------
    rs2006207061,2
    --36391731(+) TTCTT-/TCTTTTT 3 -- us2k10--------
    rs2020372011,2
    --36391732(+) TCTTT-/CTTTTT 3 -- us2k10--------
    rs22049291,2
    A--36391753(+) ttttgG/Ttgttg 3 -- us2k10--------
    rs1473238511,2
    --36391837(+) TAAAGC/TGATTC 3 -- us2k10--------
    rs81117401,2
    C--36391962(+) ACTCCA/TGGCCT 3 -- us2k1 tfbs31Minor allele frequency- T:0.00CSA 1
    rs81083601,2
    C--36391968(+) GGCCTT/CAGGTG 3 -- us2k1 tfbs31Minor allele frequency- C:0.00CSA 1
    rs1912588701,2
    --36391977(+) TGACCC/TGCCTG 3 -- us2k10--------
    rs81084591,2
    C--36391990(+) TTGGCT/CTCCCA 3 -- us2k11Minor allele frequency- C:0.00CSA 1
    rs1174512001,2
    F--36392027(+) ATGGTG/ACCTGG 3 -- us2k11Minor allele frequency- A:0.07EA 120

    HapMap Linkage Disequilibrium report for HCST (36393382 - 36395279 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for HCST
         1 CNV: 5097

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing HCST
    DNA2.0 Custom Variant and Variant Library Synthesis for HCST

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    HCST for disorders           About GeneDecksing

    OMIM gene information: 604089    OMIM disorders: --

    6 diseases for HCST:    About MalaCards
    large granular lymphocyte leukemia    lymphocytic leukemia    crohn's disease    leukemia
    tuberculosis    melanoma

    Human Genome Epidemiology (HuGE) Navigator: HCST (1 document)

    Export disorders for HCST gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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    PubMed articles for HCST gene, integrated from 9 sources (see all 42):
    (articles sorted by number of sources associating them with HCST)
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    1. An activating immunoreceptor complex formed by NKG2D and DAP10. (PubMed id 10426994)1, 2, 3 Wu J....Phillips J.H. (1999)
    2. Molecular cloning and characterization of pig immunoreceptor DAP10 and NKG2D. (PubMed id 11398969)1, 2, 9 Yim D.... Kim Y.B. (2001)
    3. DAP10 and DAP12 form distinct, but functionally cooperative, receptor complexes in natural killer cells. (PubMed id 11015446)1, 2, 9 Wu J....Lanier L.L. (2000)
    4. Silencing human NKG2D, DAP10, and DAP12 reduces cytotoxicity of activated CD8+ T cells and NK cells. (PubMed id 16339517)1, 2 Karimi M....Negrin R.S. (2005)
    5. NKG2D-DAP10 triggers human NK cell-mediated killing via a Syk- independent regulatory pathway. (PubMed id 12740575)1, 2 Billadeau D.D.... Leibson P.J. (2003)
    6. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PubMed id 12975309)1, 2 Clark H.F.... Gray A.M. (2003)
    7. Cutting edge: KAP10, a novel transmembrane adapter protein genetically linked to DAP12 but with unique signaling properties. (PubMed id 10528161)1, 2 Chang C.... Wilson M.J. (1999)
    8. Regulation of human DAP10 gene expression in NK and T cells by Ap-1 transcription factors. (PubMed id 18097042)2, 9 Marusina A.I....Coligan J.E. (2008)
    9. A critical role for DAP10 and DAP12 in CD8+ T cell-mediated tissue damage in large granular lymphocyte leukemia. (PubMed id 19075187)1, 9 Chen X....Wei S. (2009)
    10. NKG2D-mediated signaling requires a DAP10-bound Grb2-Vav1 intermediate and phosphatidylinositol-3-kinase in human natural killer cells. (PubMed id 16582911)2, 9 Upshaw J.L....Leibson P.J. (2006)

    (in PubMed, OMIM, and NCBI Bookshelf)
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    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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    Entrez Gene: 10870 HGNC: 16977 AceView: HCST Ensembl:ENSG00000126264 euGenes: HUgn10870
    ECgene: HCST Kegg: 10870 H-InvDB: HCST

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for HCST Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for HCST gene:
    Search GeneIP for patents involving HCST

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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