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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

HCK Gene

protein-coding   GIFtS: 73
GCID: GC20P030645

hemopoietic cell kinase

 Explore 29 diseases affiliated with
HCK via our new
 Human Malady Compendium 
Biological research products
for HCK
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Hemopoietic Cell Kinase1 2 3     P61Hck1
JTK91 2     EC 2.7.10.23 8
Hematopoietic Cell Kinase2 3     Tyrosine-Protein Kinase HCK2
P59-HCK/P60-HCK1     EC 2.7.108
P59Hck1     

External Ids:    HGNC: 48401   Entrez Gene: 30552   Ensembl: ENSG000001013367   OMIM: 1423705   UniProtKB: P086313   

Export aliases for HCK gene to outside databases

Previous GC identifers: GC20P030428 GC20P031338 GC20P031385 GC20P030103 GC20P030641 GC20P027428


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for HCK:
The protein encoded by this gene is a member of the Src family of tyrosine kinases. This protein is primarily
hemopoietic, particularly in cells of the myeloid and B-lymphoid lineages. It may help couple the Fc receptor to the
activation of the respiratory burst. In addition, it may play a role in neutrophil migration and in the degranulation
of neutrophils. Multiple isoforms with different subcellular distributions are produced due to both alternative
splicing and the use of alternative translation initiation codons, including a non-AUG (CUG) codon. (provided by
RefSeq, Feb 2010)

UniProtKB/Swiss-Prot: HCK_HUMAN, P08631
Function: Non-receptor tyrosine-protein kinase found in hematopoietic cells that transmits signals from cell surface
receptors and plays an important role in the regulation of innate immune responses, including neutrophil, monocyte,
macrophage and mast cell functions, phagocytosis, cell survival and proliferation, cell adhesion and migration. Acts
downstream of receptors that bind the Fc region of immunoglobulins, such as FCGR1A and FCGR2A, but also CSF3R, PLAUR,
the receptors for IFNG, IL2, IL6 and IL8, and integrins, such as ITGB1 and ITGB2. During the phagocytic process,
mediates mobilization of secretory lysosomes, degranulation, and activation of NADPH oxidase to bring about the
respiratory burst. Plays a role in the release of inflammatory molecules. Promotes reorganization of the actin
cytoskeleton and actin polymerization, formation of podosomes and cell protrusions. Inhibits TP73-mediated
transcription activation and TP73-mediated apoptosis. Phosphorylates CBL in response to activation of immunoglobulin
gamma Fc region receptors. Phosphorylates ADAM15, BCR, ELMO1, FCGR2A, GAB1, GAB2, RAPGEF1, STAT5B, TP73, VAV1 and WAS

Gene Wiki entry for HCK


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000020.10  NC_018931.1  NT_011362.10  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the HCK gene promoter:
         p53   NF-kappaB2   STAT3   CUTL1   STAT5A   NF-kappaB   NF-kappaB1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidHCK promoter sequence
   Search SABiosciences Chromatin IP Primers for HCK

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat HCK


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 20q11-q12   Ensembl cytogenetic band:  20q11.21   HGNC cytogenetic band: 20q11-q12

HCK Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
HCK gene location

GeneLoc information about chromosome 20         GeneLoc Exon Structure

GeneLoc location for GC20P030645:  view genomic region     (about GC identifiers)

Start:
30,639,991 bp from pter      End:
30,689,659 bp from pter
Size:
49,669 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: HCK_HUMAN, P08631 (See protein sequence)
Recommended Name: Tyrosine-protein kinase HCK  
Size: 526 amino acids; 59600 Da
Subunit: Interacts (via SH2 domain) with FLT3 (tyrosine phosphorylated). Interacts with VAV1, WAS and RAPGEF1 (By
similarity). Interacts (via SH3 domain) with HIV-1 Nef and Vif. This interaction stimulates its tyrosine-kinase
activity. Interacts (via SH3 domain) with HEV ORF3 protein. Interacts with ARRB1 and ARRB2. Interacts with ADAM15.
Interacts with FASLG. Interacts with CBL. Interacts with FCGR1A; the interaction may be indirect. Interacts with
IL6ST. Interacts (via SH3 domain) with ELMO1. Interacts (via SH3 domain) with TP73. Interacts with YAP1. Interacts
with ABL1 and ITGB1, and thereby recruits ABL1 to activated ITGB1
Subcellular location: Isoform 1: Lysosome. Membrane; Lipid-anchor. Cell projection, podosome membrane; Lipid-anchor.
Cytoplasm, cytosol. Note=Associated with specialized secretory lysosomes called azurophil granules. At least half of
this isoform is found in the cytoplasm, some of this fraction is myristoylated
Subcellular location: Isoform 2: Cell membrane; Lipid-anchor. Membrane, caveola; Lipid-anchor. Cell junction, focal
adhesion. Cytoplasm, cytoskeleton. Golgi apparatus. Cytoplasmic vesicle. Lysosome. Nucleus. Note=20% of this isoform
is associated with caveolae. Localization at the cell membrane and at caveolae requires palmitoylation at Cys-3.
Colocalizes with the actin cytoskeleton at focal adhesions
Subcellular location: Cytoplasmic vesicle, secretory vesicle. Cytoplasm, cytosol
Sequence caution: Sequence=AAA52643.1; Type=Frameshift; Positions=20; Sequence=BAF82585.1; Type=Erroneous initiation;
Note=Translation N-terminally extended;
6/17 PDB 3D structures from and Proteopedia for HCK (see all 17):
1AD5 (3D)        1BU1 (3D)        1QCF (3D)        2C0I (3D)        2C0O (3D)        2C0T (3D)    
Secondary accessions: A8K1I1 B4DQB6 E1P5M2 Q29RX1 Q2VPE2 Q504R5 Q5T7K1 Q5T7K2 Q96CC0 Q9H5Y5 Q9NUA4
Q9UMJ5
Alternative splicing, Alternative initiation: 4 isoforms:  P08631-1   P08631-2   P08631-3   P08631-4   (Initiates from a CTG codon)

Explore the universe of human proteins at neXtProt for HCK: NX_P08631

Post-translational modifications:

  • Phosphorylated on several tyrosine residues. Autophosphorylated. Becomes rapidly phosphorylated upon activation of the
  • immunoglobulin receptors FCGR1A and FCGR2A. Phosphorylation by the BCR-ABL fusion protein mediates activation of HCK.
    Phosphorylation at Tyr-411 increases kinase activity. Phosphorylation at Tyr-522 inhibits kinase activity. Kinase
    activity is not required for phosphorylation at Tyr-522, suggesting that this site is a target of other kinases1
  • Ubiquitinated by CBL, leading to its degradation via the proteasome1
  • Isoform 2 palmitoylation at position 2 requires prior myristoylation. Palmitoylation at position 3 is required for
  • caveolar localization of isoform 21
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P08631

  • 4/28 DME Specific Peptides for HCK (P08631) (see all 28)
     DAWEIPR  GQFGEVW  NCPEELY  KWTAPEA 

    HCK Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (6 alternative transcripts): 
    NP_001165600.1  NP_001165601.1  NP_001165602.1  NP_001165603.1  NP_001165604.1  NP_002101.2  

    ENSEMBL proteins: 
     ENSP00000365022   ENSP00000420457   ENSP00000262651   ENSP00000429848   ENSP00000427757  
     ENSP00000365012   ENSP00000444986   ENSP00000441169  
    Reactome Protein details: P08631
    Human Recombinant Protein Products: 
    EMD Millipore Purified and/or Recombinant HCK Protein
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    Novus Biologicals HCK Proteins
    Novus Biologicals HCK Lysates
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    Browse ProSpec Recombinant Proteins
    Uscn Proteins for HCK

    Gene Ontology (GO): 5/10 cellular component terms (GO ID links to tree view) (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IEA--
    GO:0005764lysosome IDA15998323
    GO:0005794Golgi apparatus IEA--
    GO:0005829cytosol TAS--
    GO:0005884colocalizes with actin filament IDA15998323


    HCK for ontologies           About GeneDecksing



    HCK Antibody Products: 
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    Uscn ELISAs and CLIAs for HCK


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    HCK for domains           About GeneDecksing

    5/8 InterPro domains/families (see all 8):
     IPR017441 Protein_kinase_ATP_BS
     IPR011009 Kinase-like_dom
     IPR001452 SH3_domain
     IPR000719 Prot_kinase_cat_dom
     IPR001245 Ser-Thr/Tyr_kinase_cat_dom

    Graphical View of Domain Structure for InterPro Entry P08631

    ProtoNet protein and cluster: P08631

    3 Blocks protein families:
    IPB000980 SH2 domain signature
    IPB001452 SH3 domain signature
    IPB008266 Tyrosine protein kinase


    UniProtKB/Swiss-Prot: HCK_HUMAN, P08631
    Domain: The SH3 domain mediates binding to HIV-1 Nef
    Similarity: Belongs to the protein kinase superfamily. Tyr protein kinase family. SRC subfamily
    Similarity: Contains 1 protein kinase domain
    Similarity: Contains 1 SH2 domain
    Similarity: Contains 1 SH3 domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: HCK_HUMAN, P08631
    Function: Non-receptor tyrosine-protein kinase found in hematopoietic cells that transmits signals from cell surface
    receptors and plays an important role in the regulation of innate immune responses, including neutrophil, monocyte,
    macrophage and mast cell functions, phagocytosis, cell survival and proliferation, cell adhesion and migration. Acts
    downstream of receptors that bind the Fc region of immunoglobulins, such as FCGR1A and FCGR2A, but also CSF3R, PLAUR,
    the receptors for IFNG, IL2, IL6 and IL8, and integrins, such as ITGB1 and ITGB2. During the phagocytic process,
    mediates mobilization of secretory lysosomes, degranulation, and activation of NADPH oxidase to bring about the
    respiratory burst. Plays a role in the release of inflammatory molecules. Promotes reorganization of the actin
    cytoskeleton and actin polymerization, formation of podosomes and cell protrusions. Inhibits TP73-mediated
    transcription activation and TP73-mediated apoptosis. Phosphorylates CBL in response to activation of immunoglobulin
    gamma Fc region receptors. Phosphorylates ADAM15, BCR, ELMO1, FCGR2A, GAB1, GAB2, RAPGEF1, STAT5B, TP73, VAV1 and WAS
    Catalytic activity: ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphate
    Enzyme regulation: Subject to autoinhibition, mediated by intramolecular interactions involving the SH2 and SH3
    domains. Kinase activity is also regulated by phosphorylation at regulatory tyrosine residues. Phosphorylation at
    Tyr-411 is required for optimal activity. Phosphorylation at Tyr-522 inhibits kinase activity. Inhibited by PP1 and
    A-770041
    Induction: Up-regulated during myeloid cell differentiation. The highest levels are detected in fully differentiated
    phagocytes. Up-regulated by IL2

         Genatlas biochemistry entry for HCK:
    hemopoietic cell kinase

    Enzyme Numbers (IUBMB): EC 2.7.10.21 2 EC 2.7.102

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    hsa-miR-4324 hsa-miR-4311 hsa-miR-4251 hsa-miR-580
    SwitchGear 3'UTR luciferase reporter plasmidHCK 3' UTR sequence
    Inhib. RNA
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    Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004713protein tyrosine kinase activity IMP10092522
    GO:0004715non-membrane spanning protein tyrosine kinase activity IEA--
    GO:0005515protein binding IPI19234535
    GO:0005524ATP binding IEA--


    HCK for ontologies           About GeneDecksing


    4 GenomeRNAi human phenotypes for HCK:
     Decreased substrate adherent c  Increased mitotic index  Paclitaxel antagonistic effect  Synthetic lethal with Ras 

    Animal Models:
         Mouse knock-out Hcktm1Hev for HCK
         9 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Hck):
     cardiovascular system  growth/size  hematopoietic system  homeostasis/metabolism  immune system 
     mortality/aging  respiratory system  skeleton  tumorigenesis 

    HCK for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/37 super-pathways (see all 37About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Immune response _CCR3 signaling in eosinophils
    Immune response _CCR3 signaling in eosinophils1.00
    Immune response CCR3 signaling in eosinophils1.00
    2Immune System
    Immune System1.00
    Innate Immune System0.46
    3HIV Infection
    HIV Infection1.00
    Host Interactions of HIV factors0.64
    4CBL ubiquitinates PI3K
    CBL ubiquitinates PI3K1.00
    Regulation of signaling by CBL0.77
    5Cleavage of Alpha-1-Microglobulin
    Sequestering and phosphorylation Fc gamma receptors in the lipid rafts0.66
    FCGR activation0.65

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for HCK
        Immune response CCR3 signaling in eosinophils

    3 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for HCK
        Fc-GammaR Pathway
    Transendothelial Migration of Leukocytes
    Fc-GammaR-Mediated Phagocytosis in Macrophages

    3 Cell Signaling Technology (CST) Pathways for HCK
        MAP Kinase Signaling
    Lymphocyte Signaling
    Tyrosine Kinases / Adaptors

    1 GeneGo (Thomson Reuters) Pathway for HCK
        Immune response CCR3 signaling in eosinophils

    5/18 BioSystems Pathways for HCK (see all 18
        Focal Adhesion
    Kit Receptor Signaling Pathway
    IL-6 Signaling Pathway
    IL-5 Signaling Pathway
    IL-3 Signaling Pathway

    5/15        Reactome Pathways for HCK (see all 15)
        Cytokine Signaling in Immune system
    FCGR activation
    Regulation of signaling by CBL
    CBL ubiquitinates PI3K
    Fcgamma receptor (FCGR) dependent phagocytosis


    2         Kegg Pathways  (Kegg details for HCK):
        Chemokine signaling pathway
    Fc gamma R-mediated phagocytosis


    HCK for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for HCK

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/168 Interacting proteins for HCK (P086311, 2, 3 ENSP000003650124) via UniProtKB, MINT, STRING, and/or I2D (see all 168)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    KHDRBS1Q076661, 2, 3, ENSP000003138294EBI-346340,EBI-1364 MINT-8374661 MINT-7051501 I2D: score=4 STRING: ENSP00000313829
    ABL1P005192, 3, ENSP000003614234MINT-7232924 MINT-7232959 MINT-7232945 MINT-18217 MINT-7232904 I2D: score=4 STRING: ENSP00000361423
    PDCD6IPQ8WUM42, 3, ENSP000003073874MINT-8109689 MINT-8374796 MINT-8374708 MINT-8374882 I2D: score=1 STRING: ENSP00000307387
    SOS1Q078892, 3, ENSP000003846754MINT-7051548 I2D: score=4 STRING: ENSP00000384675
    WASP427681, 3, ENSP000003658914EBI-346340,EBI-346375 I2D: score=4 STRING: ENSP00000365891
    About this table

    Gene Ontology (GO): 5/29 biological process terms (GO ID links to tree view) (see all 29):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0002522leukocyte migration involved in immune response TAS18538446
    GO:0002758innate immune response-activating signal transduction TAS18538446
    GO:0006468protein phosphorylation TAS3496523
    GO:0006909phagocytosis IEA--
    GO:0006954inflammatory response IEA--


    HCK for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    HCK for compounds           About GeneDecksing

    EMD Millipore small molecules for HCK:
    Small Molecule - inhibitor
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for HCK

    2 HMDB Compounds for HCK    About this table
    CompoundSynonyms CAS #PubMed Ids
    ADPadenosindiphosphorsaeure (see all 8)58-64-0--
    Adenosine triphosphate5'-(tetrahydrogen triphosphate) Adenosine (see all 24)56-65-5--

    3 DrugBank Compounds for HCK    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    1-Ter-Butyl-3-P-Tolyl-1h-Pyrazolo[3,4-D]Pyrimidin-4-Ylamine-- --target--17139284 17016423 10592235
    Quercetin-- 117-39-5target--17139284 17016423 10592235
    Phosphonotyrosine-- 21820-51-9target--17139284 17016423

    10/24 Novoseek chemical compound relationships for HCK gene (see all 24)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    tyrosine 80.8 141 11106432 (5), 15752743 (3), 9642231 (3), 19234535 (3) (see all 90)
    dasatinib 66.5 2 17431118 (1), 19211505 (1)
    gp 130 53.2 10 11689697 (3), 8156996 (2), 8939963 (2), 17310994 (2)
    mdms 51.1 1 11493626 (1)
    proline 48.8 2 12525647 (1), 10364375 (1)
    imatinib 48.4 5 15039284 (2), 16953222 (1), 12764361 (1)
    phosphotyrosine 47 4 9642231 (2)
    zymosan 35.7 6 8995234 (4), 17173331 (1)
    herbimycin a 26 1 10527858 (1)
    hgcl2 21.5 5 11106432 (4)

    Search CenterWatch for drugs/clinical trials and news about HCK 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
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    About This Section

    REFSEQ mRNAs for HCK gene (6 alternative transcripts): 
    NM_001172129.1  NM_001172130.1  NM_001172131.1  NM_001172132.1  NM_001172133.1  NM_002110.3  

    Unigene Cluster for HCK:

    Hemopoietic cell kinase
    Hs.655210  [show with all ESTs]
    Unigene Representative Sequence: NM_001172132
    9 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000375862 ENST00000486475 ENST00000262651 ENST00000520553 ENST00000518730
    ENST00000375852 ENST00000470092 ENST00000534862(uc010gdy.3) ENST00000538448(uc021wbv.1 uc002wxh.3 uc002wxi.3)


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    Inhib. RNA
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat HCK 
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    Additional cDNA sequence: 

    AK026432.1 AK225819.1 AK289896.1 AK290928.1 AK298726.1 AK314335.1 BC014435.1 BC094847.1 
    BC108930.1 BC108931.1 BC113854.1 BC114463.1 

    6 DOTS entries:

    DT.311472  DT.100659852  DT.97780462  DT.444878  DT.95165612  DT.120799457 

    24/82 AceView cDNA sequences (see all 82):

    NM_002110 AW473073 BF222829 CD671491 N59457 AW450367 AI912730 BI905929 
    CD671492 BE670668 CD672014 AA632353 BE552057 BP372970 BC014435 BC073748 
    BQ062291 BQ023841 AW452008 CD672015 AL543079 CR594271 BQ706242 AK026432 

    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for HCK    About this scheme

    ExUns: 1a · 1b · 1c ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9a · 9b ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15
    SP1:                    -     -                                                                                       
    SP2:                    -     -                                                                                       
    SP3:                    -                                                                                             
    SP4:                          -                                                                                       


    ECgene alternative splicing isoforms for HCK

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    HCK expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: ATAGGGAGGA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    HCK expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    4 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    LimbZeugopodMesenchymal Condensate CellsBone, Cartilage
    OvaryAntral FollicleCumulus CellsOvary
    OvaryPrimary FollicleGranulosa CellsOvary
    BoneThoracic RibBone
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See HCK Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for HCK

    SOURCE GeneReport for Unigene cluster: Hs.655210

    UniProtKB/Swiss-Prot: HCK_HUMAN, P08631
    Tissue specificity: Detected in monocytes and neutrophils (at protein level). Expressed predominantly in cells of the
    myeloid and B-lymphoid lineages. Highly expressed in granulocytes. Detected in tonsil

        SABiosciences Expression via Pathway-Focused PCR Arrays including HCK: 
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for HCK gene from 5/17 species (see all 17)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves HCK1 hemopoietic cell kinase 75(n)
    77.8(a)
      419280  XM_417454.3  XP_417454.2 
    lizard
    (Anolis carolinensis)
    Reptilia HCK6
    --
    78(a)
    1 ↔ 1
    GL343505.1(359386-391196)
    zebrafish
    (Danio rerio)
    Actinopterygii hck6
    hemopoietic cell kinase
    76(a)
    1 ↔ 1
    23(7579508-7619554)
    fruit fly
    (Drosophila melanogaster)
    Insecta Src64B3 ring canal formation protein tyrosine kinase 48(a)   64B12   --
    worm
    (Caenorhabditis elegans)
    Secernentea src-13 Expression: vulva, anus, mu_bod, pharyngeal
    muscle, more
    43(a)
    (best of 7)
      I(1567610-1580076)   --


    ENSEMBL Gene Tree for HCK (if available)
    TreeFam Gene Tree for HCK (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for HCK gene
    TEC2  FRK2  LCK2  BLK2  FGR2  ITK2  LYN2  TXK2  
    YES12  PTK62  SRC2  ABL12  FYN2  BMX2  ABL22  SRMS2  
    BTK2  
    18/67 SIMAP similar genes for HCK using alignment to 6 protein entries:     HCK_HUMAN (see all proteins) (see all similar genes):
    LYN    FYN    YES1    BLK    SRC    FGR
    NCK2    EPHA2    FRK    GRAP2    tec    LCK
    ABL1    EPHA6    MET    EPHA3    PTK6    ZAK

    HCK for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/984 NCBI SNPs in HCK are shown (see all 984    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 20 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs732470121,2
    C,--27427565(+) GAATTC/TTTGTA 6 -- us2k11Minor allele frequency- T:0.50WA 2
    rs170937751,2
    F,--27428026(+) ACTGTG/AGCAGG 6 -- us2k12Minor allele frequency- A:0.04MN EA 356
    rs577018711,2
    --27428045(+) GATAGA/GTGGGG 6 -- us2k10--------
    rs10049101,2
    C,F,A,H,--27428092(-) TATACC/AGCCGG 6 -- us2k127Minor allele frequency- A:0.12MN NS EA NA WA 3442
    rs767430991,2
    --27428108(+) CTGGGT/CATTAA 6 -- us2k12Minor allele frequency- C:0.08CSA WA 120
    rs731046321,2
    --27428421(+) TAGGAC/TGCTGG 6 -- us2k10--------
    rs1137404301,2
    C,--27428516(+) TGGATG/AGTGCT 6 -- us2k11Minor allele frequency- A:0.50NA 2
    rs116996701,2
    C,F,H--27429087(+) GGGGAG/ACCGCG 6 -- int15Minor allele frequency- A:0.00NS EA NA 522
    rs589763421,2
    C,--27429257(+) GGGGG-/CGGGGA 6 -- int10--------
    rs61213251,2
    C,A,--27430001(+) gggagG/Tctgag 6 -- int12Minor allele frequency- T:0.25NA 4

    HapMap Linkage Disequilibrium report for HCK (30639991 - 30689659 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for HCK
         1 CNV: 9823
    Human Gene Mutation Database (HGMD): HCK

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    HCK for disorders           About GeneDecksing

    OMIM gene information: 142370    OMIM disorders: --

    UniProtKB/Swiss-Prot: HCK_HUMAN, P08631
  • Note=Aberrant activation of HCK by HIV-1 protein Nef enhances HIV-1 replication and contributes to HIV-1
  • pathogenicity
  • Note=Aberrant activation of HCK, e.g. by the BCR-ABL fusion protein, promotes cancer cell proliferation

  • 20/29 diseases for HCK (see all 29):    About MalaCards
    wiskott-aldrich syndrome    cervical adenosquamous carcinoma    myeloid leukemia    acute promyelocytic leukemia
    hepatitis e    adenosquamous carcinoma    acute lymphocytic leukemia    chronic myeloid leukemia
    lymphoblastic leukemia    lymphocytic leukemia    kaposi's sarcoma    leukemia
    multiple myeloma    hepatitis c    tonsillitis    copd
    myeloma    sarcoma    colon carcinoma    dementia

    1 disease from the University of Copenhagen DISEASES database for HCK:
    Cervical adenosquamous carcinoma

    9 Novoseek disease relationships for HCK gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    myeloid leukemia chronic 54.7 3 17344919 (1), 16546576 (1), 9390404 (1)
    immunodeficiency 36.1 13 10473622 (2), 9621101 (2), 9218412 (1), 15613341 (1) (see all 7)
    myeloid leukemia 25.2 1 10849448 (1)
    aids 21.4 4 17893228 (1), 15595833 (1), 16352531 (1), 17920628 (1)
    leukemia 18.3 3 17344919 (2), 18538446 (1)
    lymphoblastic leukemia acute 15.1 8 10720701 (2), 10658677 (2), 17344919 (1)
    cancer 4.85 1 7690925 (1)
    tumors 3.42 3 17344919 (1), 19211505 (1), 12237848 (1)
    necrosis 0 1 12237848 (1)

    Human Genome Epidemiology (HuGE) Navigator: HCK (6 documents)
    Tumor Gene Database (TGDB): HCK

    Export disorders for HCK gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for HCK gene, integrated from 9 sources (see all 317):
    (articles sorted by number of sources associating them with HCK)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Identification of a human gene (HCK) that encodes a protein-tyrosine kinase and is expressed in hemopoietic cells. (PubMed id 3496523)1, 2, 3 Quintrell N.... Rowley J.D. (1987)
    2. Regulation of p73 by Hck through kinase-dependent and independent mechanisms. (PubMed id 17535448)1, 2, 9 Paliwal P....Swarup G. (2007)
    3. Hematopoietic cell kinase (Hck) isoforms and phagocyte duties - from signaling and actin reorganization to migration and phagocytosis. (PubMed id 18538446)1, 2, 9 Guiet R....Maridonneau-Parini I. (2008)
    4. The tyrosine kinase Hck is an inhibitor of HIV-1 replication counteracted by the viral vif protein. (PubMed id 11278465)1, 2, 9 Hassaine G.... Decroly E. (2001)
    5. The Src family kinase Hck interacts with Bcr-Abl by a kinase-independent mechanism and phosphorylates the Grb2-binding site of Bcr. (PubMed id 9407116)1, 2, 9 Warmuth M....Hallek M. (1997)
    6. SH3-mediated Hck tyrosine kinase activation and fibroblast transformation by the Nef protein of HIV-1. (PubMed id 9218412)1, 2, 9 Briggs S.D.... Smithgall T.E. (1997)
    7. Phosphorylation-dependent interactions between ADAM15 cytoplasmic domain and Src family protein-tyrosine kinases. (PubMed id 11741929)1, 2, 9 Poghosyan Z....Edwards D.R. (2002)
    8. Two isoforms of murine hck, generated by utilization of alternative translational initiation codons, exhibit different patterns of subcellular localization. (PubMed id 1875927)1, 2, 9 Lock P.... Dunn A.R. (1991)
    9. Solution structure of the human Hck SH3 domain and identification of its ligand binding site. (PubMed id 9571048)1, 2, 9 Horita D.A.... Byrd R.A. (1998)
    10. Myristoylation and differential palmitoylation of the HCK protein-tyrosine kinases govern their attachment to membranes and association with caveolae. (PubMed id 7791757)1, 2, 9 Robbins S.M....Bishop J.M. (1995)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 3055 HGNC: 4840 AceView: HCK Ensembl:ENSG00000101336 euGenes: HUgn3055
    ECgene: HCK Kegg: 3055 H-InvDB: HCK

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for HCK Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for HCK Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for HCK gene:
    Search GeneIP for patents involving HCK

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
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    About This Section

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