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Aliases for HCG9P5 Gene

Aliases for HCG9P5 Gene

  • HLA Complex Group 9 Pseudogene 5 2 3 5
  • HCGIX-5 Pseudogene 3
  • DJ377H14.6 3
  • HCGIX-5 3

External Ids for HCG9P5 Gene

Previous GeneCards Identifiers for HCG9P5 Gene

  • GC06P029823
  • GC06P029824
  • GC06M029824
  • GC06P029717
  • GC06P029519
  • GC06Pj29711
  • GC06P029804
  • GC06P030025
  • GC06P030177
  • GC06P030052
  • GC06P030093
  • GC06P030338
  • GC06P030483

Summaries for HCG9P5 Gene

GeneCards Summary for HCG9P5 Gene

HCG9P5 (HLA Complex Group 9 Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HCG9P5 Gene

Genomics for HCG9P5 Gene

Regulatory Elements for HCG9P5 Gene

Enhancers for HCG9P5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F030715 1 ENCODE 25 +971.3 971273 7.7 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 DDX39B LY6G5B PPP1R10 DHX16 MICA HLA-F-AS1 PAIP1P1 HCG9P5 HLA-K MICE
GH06F029648 1.1 Ensembl ENCODE 15.9 -98.4 -98440 2.0 HDGF PKNOX1 ATF1 CREB3L1 SIN3A GLI4 ZNF48 BRCA1 ZNF2 YY1 IFITM4P HCG9P5 PPP1R10 TRIM26 MICE ZFP57 HLA-J ZNRD1ASP HCG4P7 HLA-F-AS1
GH06F030065 0.6 ENCODE 15.8 +318.6 318552 3.0 HDGF PKNOX1 ARNT CREB3L1 ZFP64 ARID4B SIN3A DMAP1 YBX1 ZNF2 HCG4P3 PPP1R10 IFITM4P HLA-A TRIM26 PAIP1P1 RPL7P4 HCG4P7 HLA-P UBQLN1P1
GH06F030343 0.2 ENCODE 15.8 +596.6 596558 1.9 HDGF CREB3L1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 PAF1 TRIM31 HCG9P5 HCG18 HLA-U MICE ZFP57 IFITM4P HCG4P7 HLA-F-AS1 ENSG00000272236
GH06F030554 0.5 ENCODE 15.8 +808.4 808371 3.6 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ABCF1 HCG9P5 DHX16 MICA DDX39B MICE HLA-W IFITM4P HCG4P7 MICD
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HCG9P5 on UCSC Golden Path with GeneCards custom track

Promoters for HCG9P5 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000487555 446 1801 PKNOX1 GLI4 DMAP1 ZNF48 YY1 GLIS2 FOS SP3 SP5 NFYC

Genomic Location for HCG9P5 Gene

Chromosome:
6
Start:
29,748,254 bp from pter
End:
29,748,648 bp from pter
Size:
395 bases
Orientation:
Plus strand

Genomic View for HCG9P5 Gene

Genes around HCG9P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HCG9P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HCG9P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HCG9P5 Gene

Post-translational modifications for HCG9P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HCG9P5 Gene

Domains & Families for HCG9P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HCG9P5 Gene

Function for HCG9P5 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HCG9P5 Gene

Localization for HCG9P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HCG9P5 Gene

Pathways & Interactions for HCG9P5 Gene

SuperPathways for HCG9P5 Gene

No Data Available

Interacting Proteins for HCG9P5 Gene

Gene Ontology (GO) - Biological Process for HCG9P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HCG9P5 Gene

Transcripts for HCG9P5 Gene

mRNA/cDNA for HCG9P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HCG9P5 Gene

No ASD Table

Relevant External Links for HCG9P5 Gene

GeneLoc Exon Structure for
HCG9P5
ECgene alternative splicing isoforms for
HCG9P5

Expression for HCG9P5 Gene

mRNA expression in normal human tissues for HCG9P5 Gene

NURSA nuclear receptor signaling pathways regulating expression of HCG9P5 Gene:

HCG9P5
genes like me logo Genes that share expression patterns with HCG9P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HCG9P5 Gene

Orthologs for HCG9P5 Gene

Evolution for HCG9P5 Gene

ENSEMBL:
Gene Tree for HCG9P5 (if available)
TreeFam:
Gene Tree for HCG9P5 (if available)

No data available for Orthologs for HCG9P5 Gene

Paralogs for HCG9P5 Gene

No data available for Paralogs for HCG9P5 Gene

Variants for HCG9P5 Gene

Relevant External Links for HCG9P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HCG9P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HCG9P5 Gene

Disorders for HCG9P5 Gene

No disorders were found for HCG9P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HCG9P5 Gene

Publications for HCG9P5 Gene

  1. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T. … Inoko H. (Proc. Natl. Acad. Sci. U.S.A. 1999) 2 3 64

Products for HCG9P5 Gene

Sources for HCG9P5 Gene

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