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Aliases for HCG4P5 Gene

Subcategory (RNA class) for HCG4P5 Gene

antisense

Aliases for HCG4P5 Gene

  • HLA Complex Group 4 Pseudogene 5 2 3 5
  • HCGIV-05 Pseudogene 2 3
  • HCGIV-05 3
  • HCGIV-5 3
  • HCGIV.4 3

External Ids for HCG4P5 Gene

ORGUL Members for HCG4P5 Gene

Previous GeneCards Identifiers for HCG4P5 Gene

  • GC00U913608
  • GC06M030014
  • GC06M030016
  • GC06M029912
  • GC06M029914
  • GC06M029930
  • GC06M029942
  • GC06M029949
  • GC06M029960
  • GC06M029946
  • GC06M030035

Summaries for HCG4P5 Gene

GeneCards Summary for HCG4P5 Gene

HCG4P5 (HLA Complex Group 4 Pseudogene 5) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HCG4P5 Gene

Genomics for HCG4P5 Gene

Regulatory Elements for HCG4P5 Gene

Enhancers for HCG4P5 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around HCG4P5 on UCSC Golden Path with GeneCards custom track

Promoters for HCG4P5 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around HCG4P5 on UCSC Golden Path with GeneCards custom track

Genomic Location for HCG4P5 Gene

Chromosome:
6
Start:
29,940,912 bp from pter
End:
29,941,801 bp from pter
Size:
890 bases
Orientation:
Minus strand

Genomic View for HCG4P5 Gene

Genes around HCG4P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HCG4P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HCG4P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HCG4P5 Gene

Post-translational modifications for HCG4P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HCG4P5 Gene

Domains & Families for HCG4P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HCG4P5 Gene

Function for HCG4P5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HCG4P5 Gene

Localization for HCG4P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HCG4P5 Gene

Pathways & Interactions for HCG4P5 Gene

SuperPathways for HCG4P5 Gene

No Data Available

Interacting Proteins for HCG4P5 Gene

Gene Ontology (GO) - Biological Process for HCG4P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HCG4P5 Gene

Drugs & Compounds for HCG4P5 Gene

No Compound Related Data Available

Transcripts for HCG4P5 Gene

mRNA/cDNA for HCG4P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HCG4P5 Gene

No ASD Table

Relevant External Links for HCG4P5 Gene

GeneLoc Exon Structure for
HCG4P5
ECgene alternative splicing isoforms for
HCG4P5

Expression for HCG4P5 Gene

mRNA expression in normal human tissues for HCG4P5 Gene

mRNA differential expression in normal tissues according to GTEx for HCG4P5 Gene

This gene is overexpressed in Whole Blood (x11.3).
genes like me logo Genes that share expression patterns with HCG4P5: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for HCG4P5 Gene

Orthologs for HCG4P5 Gene

Evolution for HCG4P5 Gene

ENSEMBL:
Gene Tree for HCG4P5 (if available)
TreeFam:
Gene Tree for HCG4P5 (if available)

No data available for Orthologs for HCG4P5 Gene

Paralogs for HCG4P5 Gene

No data available for Paralogs for HCG4P5 Gene

Variants for HCG4P5 Gene

Relevant External Links for HCG4P5 Gene

HapMap Linkage Disequilibrium report
HCG4P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HCG4P5 Gene

Disorders for HCG4P5 Gene

No disorders were found for HCG4P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HCG4P5 Gene

Publications for HCG4P5 Gene

  1. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T. … Inoko H. (Proc. Natl. Acad. Sci. U.S.A. 1999) 2 3 67

Products for HCG4P5 Gene

Sources for HCG4P5 Gene

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