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Aliases for HCG4P4 Gene

Aliases for HCG4P4 Gene

  • HLA Complex Group 4 Pseudogene 4 2 3
  • HCGIV-04 Pseudogene 2 3
  • HCGIV-04 3
  • HCGIV-4 3
  • HCGIV.3 3

External Ids for HCG4P4 Gene

Previous GeneCards Identifiers for HCG4P4 Gene

  • GC00U913607
  • GC06M030028
  • GC06M030030
  • GC06M029923
  • GC06M029925
  • GC06M029926
  • GC06M029935
  • GC06M030020

Summaries for HCG4P4 Gene

GeneCards Summary for HCG4P4 Gene

HCG4P4 (HLA Complex Group 4 Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HCG4P4 Gene

Genomics for HCG4P4 Gene

Regulatory Elements for HCG4P4 Gene

Enhancers for HCG4P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G029952 0.9 Ensembl ENCODE 0.7 +2.3 2339 1.3 FOSL1 ZNF146 JUND ATF3 NR2F1 JUN ADNP NR2F6 HLA-J HLA-T HLA-K HLA-A HCG4P5 ZFP57 MICD HCG4P3 HCG4P4 PIR61557
GH06G029947 0.8 ENCODE dbSUPER 0.4 +8.1 8115 0.2 PAF1 POLR2A ZBED1 BACH1 RBFOX2 HLA-J HLA-T HLA-A HLA-H PIR61557 HCG4P4
GH06G029945 0.8 ENCODE dbSUPER 0.4 +10.6 10635 0.2 SOX5 ELF3 WRNIP1 NR2F6 RARA HLA-G HLA-J HLA-K HLA-H ZNRD1 PIR61557 HCG4P4
GH06G029949 0.8 ENCODE dbSUPER 0.4 +10.1 10115 0.2 SOX5 ELF3 NFIL3 POLR2A SMAD4 TEAD3 HLA-A ZNRD1 PIR61557 HCG4P4
GH06G029948 0.7 ENCODE dbSUPER 0.4 +8.6 8590 0.1 POLR2A SMAD5 RBFOX2 HLA-G HCG4P3 HLA-K PIR61557 HCG4P4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HCG4P4 on UCSC Golden Path with GeneCards custom track

Genomic Location for HCG4P4 Gene

Chromosome:
6
Start:
29,955,205 bp from pter
End:
29,955,633 bp from pter
Size:
429 bases
Orientation:
Minus strand

Genomic View for HCG4P4 Gene

Genes around HCG4P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HCG4P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HCG4P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HCG4P4 Gene

Post-translational modifications for HCG4P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HCG4P4 Gene

Domains & Families for HCG4P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HCG4P4 Gene

Function for HCG4P4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HCG4P4 Gene

Localization for HCG4P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HCG4P4 Gene

Pathways & Interactions for HCG4P4 Gene

SuperPathways for HCG4P4 Gene

No Data Available

Interacting Proteins for HCG4P4 Gene

Gene Ontology (GO) - Biological Process for HCG4P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HCG4P4 Gene

Drugs & Compounds for HCG4P4 Gene

No Compound Related Data Available

Transcripts for HCG4P4 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for HCG4P4 Gene

No ASD Table

Relevant External Links for HCG4P4 Gene

GeneLoc Exon Structure for
HCG4P4
ECgene alternative splicing isoforms for
HCG4P4

No data available for mRNA/cDNA for HCG4P4 Gene

Expression for HCG4P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of HCG4P4 Gene:

HCG4P4
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HCG4P4 Gene

Orthologs for HCG4P4 Gene

No data available for Orthologs and Evolution for HCG4P4 Gene

Paralogs for HCG4P4 Gene

No data available for Paralogs for HCG4P4 Gene

Variants for HCG4P4 Gene

Relevant External Links for HCG4P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HCG4P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HCG4P4 Gene

Disorders for HCG4P4 Gene

No disorders were found for HCG4P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HCG4P4 Gene

Publications for HCG4P4 Gene

  1. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T. … Inoko H. (Proc. Natl. Acad. Sci. U.S.A. 1999) 2 3 64

Products for HCG4P4 Gene

Sources for HCG4P4 Gene

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