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Aliases for HCG25 Gene

Subcategory (RNA class) for HCG25 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for HCG25 Gene

  • HLA Complex Group 25 (Non-Protein Coding) 2 3
  • HLA Complex Group 25 2
  • DJ1033B10.16 3

External Ids for HCG25 Gene

ORGUL Members for HCG25 Gene

Summaries for HCG25 Gene

GeneCards Summary for HCG25 Gene

HCG25 (HLA Complex Group 25 (Non-Protein Coding)) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HCG25 Gene

Genomics for HCG25 Gene

Genomic Location for HCG25 Gene

Start:
33,249,534 bp from pter
End:
33,254,989 bp from pter
Size:
5,456 bases
Orientation:
Plus strand

Genomic View for HCG25 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HCG25 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Regulatory Elements for HCG25 Gene

Proteins for HCG25 Gene

Post-translational modifications for HCG25 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HCG25 Gene

Domains for HCG25 Gene

Gene Families for HCG25 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with HCG25: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for HCG25 Gene

Function for HCG25 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for HCG25 Gene

Localization for HCG25 Gene

No data available for Gene Ontology (GO) - Cellular Components for HCG25 Gene

Pathways for HCG25 Gene

SuperPathways for HCG25 Gene

No Data Available

Interacting Proteins for HCG25 Gene

Gene Ontology (GO) - Biological Process for HCG25 Gene

None

No data available for Pathways by source for HCG25 Gene

Transcripts for HCG25 Gene

mRNA/cDNA for HCG25 Gene

(1) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HCG25 Gene

HLA complex group 25 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HCG25 Gene

No ASD Table

Relevant External Links for HCG25 Gene

GeneLoc Exon Structure for
HCG25
ECgene alternative splicing isoforms for
HCG25

Expression for HCG25 Gene

mRNA expression in normal human tissues for HCG25 Gene

SOURCE GeneReport for Unigene cluster for HCG25 Gene Hs.675862

genes like me logo Genes that share expressions with HCG25: view

Orthologs for HCG25 Gene

Evolution for HCG25 Gene

ENSEMBL:
Gene Tree for HCG25 (if available)
TreeFam:
Gene Tree for HCG25 (if available)

No data available for Orthologs for HCG25 Gene

Paralogs for HCG25 Gene

No data available for Paralogs for HCG25 Gene

Variants for HCG25 Gene

Sequence variations from dbSNP and Humsavar for HCG25 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs105445 -- 33,249,212(-) TTACC(C/G)CGCCT upstream-variant-2KB
rs457565 -- 33,248,127(-) TCCCC(C/T)TCCTA upstream-variant-2KB
rs464022 -- 33,249,565(-) CCTGA(A/G)GCTGA nc-transcript-variant
rs465666 -- 33,248,125(-) CCCCT(C/T)CTAAT upstream-variant-2KB
rs1004001 -- 33,249,224(-) GTTGC(C/T)CCGGG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for HCG25 Gene

Variant ID Type Subtype PubMed ID
nsv830634 CNV Loss 17160897

Relevant External Links for HCG25 Gene

HapMap Linkage Disequilibrium report
HCG25

Disorders for HCG25 Gene

No disorders were found for HCG25 Gene.

No data available for UniProtKB/Swiss-Prot for HCG25 Gene

Publications for HCG25 Gene

No publications were found for HCG25 Gene.

Products for HCG25 Gene

Sources for HCG25 Gene

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