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Aliases for HCG16 Gene

Subcategory (RNA class) for HCG16 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for HCG16 Gene

  • HLA Complex Group 16 (Non-Protein Coding) 2 3
  • HLA Complex Group 16 2
  • DJ25J6.7 3

External Ids for HCG16 Gene

Summaries for HCG16 Gene

GeneCards Summary for HCG16 Gene

HCG16 (HLA Complex Group 16 (Non-Protein Coding)) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HCG16 Gene

Genomics for HCG16 Gene

Genomic Location for HCG16 Gene

Start:
28,985,851 bp from pter
End:
28,988,622 bp from pter
Size:
2,772 bases
Orientation:
Plus strand

Genomic View for HCG16 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HCG16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Regulatory Elements for HCG16 Gene

Proteins for HCG16 Gene

Post-translational modifications for HCG16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HCG16 Gene

Domains for HCG16 Gene

Gene Families for HCG16 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with HCG16: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for HCG16 Gene

Function for HCG16 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for HCG16 Gene

Localization for HCG16 Gene

No data available for Gene Ontology (GO) - Cellular Components for HCG16 Gene

Pathways for HCG16 Gene

SuperPathways for HCG16 Gene

No Data Available

Interacting Proteins for HCG16 Gene

Gene Ontology (GO) - Biological Process for HCG16 Gene

None

No data available for Pathways by source for HCG16 Gene

Transcripts for HCG16 Gene

mRNA/cDNA for HCG16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HCG16 Gene

No ASD Table

Relevant External Links for HCG16 Gene

GeneLoc Exon Structure for
HCG16
ECgene alternative splicing isoforms for
HCG16

Expression for HCG16 Gene

mRNA expression in normal human tissues for HCG16 Gene

genes like me logo Genes that share expressions with HCG16: view

Orthologs for HCG16 Gene

Evolution for HCG16 Gene

ENSEMBL:
Gene Tree for HCG16 (if available)
TreeFam:
Gene Tree for HCG16 (if available)

No data available for Orthologs for HCG16 Gene

Paralogs for HCG16 Gene

No data available for Paralogs for HCG16 Gene

Variants for HCG16 Gene

Sequence variations from dbSNP and Humsavar for HCG16 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs3129791 -- 28,986,516(+) GGACC(A/G)CCGGT intron-variant, downstream-variant-500B
rs3129792 -- 28,988,639(+) TCCAC(A/G)GCGAA downstream-variant-500B
rs3130890 -- 28,989,362(+) CTCCC(C/T)GGTTC downstream-variant-500B, nc-transcript-variant
rs3135321 -- 28,987,749(-) TTATA(C/T)TTGAG intron-variant
rs6904975 -- 28,984,258(+) AGAGA(A/G)AACGT upstream-variant-2KB

Relevant External Links for HCG16 Gene

HapMap Linkage Disequilibrium report
HCG16

No data available for Structural Variations from Database of Genomic Variants (DGV) for HCG16 Gene

Disorders for HCG16 Gene

No disorders were found for HCG16 Gene.

No data available for UniProtKB/Swiss-Prot for HCG16 Gene

Publications for HCG16 Gene

No publications were found for HCG16 Gene.

Products for HCG16 Gene

Sources for HCG16 Gene

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