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Aliases for HCG15 Gene

Subcategory (RNA class) for HCG15 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for HCG15 Gene

  • HLA Complex Group 15 (Non-Protein Coding) 2 3 5
  • HLA Complex Group 15 2
  • DJ25J6.6 3

External Ids for HCG15 Gene

Previous GeneCards Identifiers for HCG15 Gene

  • GC00U915690
  • GC06U900750
  • GC06P028957
  • GC06P028960
  • GC06P028961
  • GC06P028965
  • GC06P028969

Summaries for HCG15 Gene

GeneCards Summary for HCG15 Gene

HCG15 (HLA Complex Group 15 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with HCG15 include Small Cell Cancer Of The Lung, Somatic.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HCG15 Gene

Genomics for HCG15 Gene

Regulatory Elements for HCG15 Gene

Enhancers for HCG15 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F028953 1.4 Ensembl ENCODE 11.8 -32.5 -32466 2.1 PKNOX1 ARNT SIN3A ARID4B ZNF2 YY1 CBX5 FOS KLF13 PAF1 TRIM27 ZKSCAN8 ZKSCAN3 HCG15 HCG16 ZKSCAN4 HCG14 ZNF602P ZFP57 HCG4P7
GH06F028950 1.3 Ensembl ENCODE 11.8 -35.1 -35112 1.0 ARNT MLX ARID4B SIN3A ZNF2 GTF3C2 ZNF143 FOS DEK NFYC TRIM27 ZKSCAN8 ZKSCAN3 HCG16 HCG15 ZKSCAN4 HCG14 LINC01556 TRK-TTT3-3 TRM-CAT3-2
GH06F028947 1.2 Ensembl ENCODE 11.8 -37.8 -37842 1.7 ARID4B ZNF48 YY1 FOS GTF2B PPARG KAT8 SREBF1 MIER3 SMARCA4 TRIM27 ZFP57 HCG15 HCG16 ZKSCAN3 ZKSCAN4 HCG14 HLA-K HLA-A ZNF602P
GH06F028939 1.2 ENCODE 11.6 -45.4 -45389 2.7 HDGF ARNT CREB3L1 SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 FOS ZKSCAN8 ZKSCAN3 TRIM27 ZKSCAN4 HCG4P7 HLA-H HLA-F-AS1 MICE ZSCAN9 HLA-U
GH06F028894 1.2 ENCODE 10.8 -89.3 -89314 3.9 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF416 ZNF263 ZKSCAN3 ZKSCAN8 ZKSCAN4 TRIM27 ZSCAN9 ZSCAN26 ZNF311 ZNF603P HCG4P7 ZFP57
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HCG15 on UCSC Golden Path with GeneCards custom track

Genomic Location for HCG15 Gene

Chromosome:
6
Start:
28,986,203 bp from pter
End:
28,987,484 bp from pter
Size:
1,282 bases
Orientation:
Plus strand

Genomic View for HCG15 Gene

Genes around HCG15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HCG15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HCG15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for HCG15 Gene

Proteins for HCG15 Gene

Post-translational modifications for HCG15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HCG15 Gene

Domains & Families for HCG15 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HCG15 Gene

Function for HCG15 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HCG15 Gene

Localization for HCG15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HCG15 Gene

Pathways & Interactions for HCG15 Gene

SuperPathways for HCG15 Gene

No Data Available

Interacting Proteins for HCG15 Gene

Gene Ontology (GO) - Biological Process for HCG15 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HCG15 Gene

Transcripts for HCG15 Gene

mRNA/cDNA for HCG15 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HCG15 Gene

No ASD Table

Relevant External Links for HCG15 Gene

GeneLoc Exon Structure for
HCG15
ECgene alternative splicing isoforms for
HCG15

Expression for HCG15 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HCG15 Gene

NURSA nuclear receptor signaling pathways regulating expression of HCG15 Gene:

HCG15
genes like me logo Genes that share expression patterns with HCG15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HCG15 Gene

Orthologs for HCG15 Gene

Evolution for HCG15 Gene

ENSEMBL:
Gene Tree for HCG15 (if available)
TreeFam:
Gene Tree for HCG15 (if available)

No data available for Orthologs for HCG15 Gene

Paralogs for HCG15 Gene

No data available for Paralogs for HCG15 Gene

Variants for HCG15 Gene

Relevant External Links for HCG15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HCG15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HCG15 Gene

Disorders for HCG15 Gene

MalaCards: The human disease database

(1) MalaCards diseases for HCG15 Gene - From: DISEASES

Disorder Aliases PubMed IDs
small cell cancer of the lung, somatic
  • small cell cancer of the lung
- elite association - COSMIC cancer census association via MalaCards
Search HCG15 in MalaCards View complete list of genes associated with diseases
genes like me logo Genes that share disorders with HCG15: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for HCG15 Gene

Publications for HCG15 Gene

No publications were found for HCG15 Gene.

Products for HCG15 Gene

Sources for HCG15 Gene

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