HCAR1 Gene
protein-coding GIFtS: 48
GCID: GC12M123104
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|
hydroxycarboxylic acid receptor 1(Previous names: G protein-coupled receptor 104, G protein-coupled receptor...)
(Previous symbols: GPR104, GPR81)
| |
Aliases
for HCAR1 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| Hydroxycarboxylic Acid Receptor 11 2 | | G Protein-Coupled Receptor 811 2 | | GPR811 2 3 5 | | G-Protein Coupled Receptor 1042 3 | | GPR1041 2 3 | | G-Protein Coupled Receptor 812 3 | | HCA11 2 3 | | FKSG801 | | LACR11 2 | | Hydroxy-Carboxylic Acid Receptor 12 | | TA-GPCR1 2 | | Lactate Receptor 12 | | G Protein-Coupled Receptor 1041 2 | | T-Cell Activation G Protein-Coupled Receptor2 |
Export aliases for HCAR1 gene to outside databases |
Summaries
for HCAR1 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
Entrez Gene summary for HCAR1:
G protein-coupled receptors (GPCRs, or GPRs), such as GPR81, contain 7 transmembrane domains and transduceextracellular signals through heterotrimeric G proteins.(supplied by OMIM, Feb 2005)
UniProtKB/Swiss-Prot: HCAR1_HUMAN, Q9BXC0Function: Acts as a receptor for L-lactate and mediates its anti-lipolytic effect through a G(i)-protein-mediatedpathway
Gene Wiki entry for HCAR1 (GPR81)
|
Genomic Views
for HCAR1 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000012.11 NC_018923.1 NT_009755.19
Regulatory elements:
 Search SABiosciences Regulatory transcription factor binding sites for HCAR1
Other transcription factors
Search SABiosciences Chromatin IP Primers for HCAR1
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat HCAR1 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 12q24.31 Ensembl cytogenetic band: 12q24.31 HGNC cytogenetic band: 12q24.31HCAR1 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 12 GeneLoc Exon Structure GeneLoc location for GC12M123104: view genomic region
(about GC identifiers)
Start:
|
123,104,824 bp from pter |
End:
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123,215,390 bp from pter |
Size:
|
110,567 bases |
Orientation:
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minus strand |
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Proteins
for HCAR1 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: HCAR1_HUMAN, Q9BXC0 (See
protein sequence)Recommended Name: Hydroxycarboxylic acid receptor 1 Size: 346 amino acids; 39295 Da
Subcellular location: Cell membrane; Multi-pass membrane protein
Secondary accessions: B2R9X4 Q3Y5J3 Q4VBN1 Q6NXU5Explore the universe of human proteins at neXtProt for HCAR1: NX_Q9BXC0
Post-translational modifications:
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_Q9BXC0
HCAR1 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins: NP_115943.1
ENSEMBL proteins: ENSP00000409980 ENSP00000349478 ENSP00000389255
Human Recombinant Protein Products for HCAR1:
Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005886 | plasma membrane |
IEA | -- | | GO:0016021 | integral to membrane |
IEA | -- |
HCAR1 for ontologies About GeneDecksing
HCAR1 Antibody Products:
Assay Products for HCAR1: |
Protein
Domains /
Families
for HCAR1 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
HCAR1 for domains About GeneDecksing
2 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q9BXC0ProtoNet protein and cluster: Q9BXC0 UniProtKB/Swiss-Prot: HCAR1_HUMAN, Q9BXC0Similarity: Belongs to the G-protein coupled receptor 1 family |
Function
for HCAR1 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase,
shRNA from
OriGene,
Sirion Biotech,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Sirion Biotech,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
Sirion Biotech,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Molecular Function:
UniProtKB/Swiss-Prot Summary: HCAR1_HUMAN, Q9BXC0Function: Acts as a receptor for L-lactate and mediates its anti-lipolytic effect through a G(i)-protein-mediatedpathway Gene Ontology (GO): 1 molecular function term (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0004930 | G-protein coupled receptor activity |
IEA | -- |
HCAR1 for ontologies About GeneDecksing
Phenotypes:
1 GenomeRNAi human phenotype for HCAR1:
1 MGI mutant phenotype (inferred from 1 allele ) (MGI details for Gpr81):
HCAR1 for phenotypes About GeneDecksing
Animal Models:
Clone
Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for HCAR1 (see all 3)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for HCAR1
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
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Synthesis Service for HCAR1 | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat HCAR1 |
In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HCAR1 |
|
Pathways & Interactions
for HCAR1 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Unified GeneCards pathways About this table
See pathways by source
| Super-pathway | contained gene-specific pathways |
|---|
| 1 | Class A/1 (Rhodopsin-like receptors) | |
1  BioSystems Pathway for HCAR1
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for HCAR1
Gene Ontology (GO): 1 biological process term (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0032355 | response to estradiol stimulus |
IDA | 15831516 |
HCAR1 for ontologies About GeneDecksing
|
Drugs & Compounds
for HCAR1 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Compounds for HCAR1 available from Tocris Bioscience About this table
| Compound | Action |
CAS
# |
|---|
| 3,5-DHBA | Selective HCA1 agonist | [99-10-5] |
Search CenterWatch for drugs/clinical trials and news about HCAR1
|
Transcripts
for HCAR1 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
Sirion Biotech,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for HCAR1 gene: NM_032554.3 Unigene Clusters for HCAR1: Hydroxycarboxylic acid receptor 1 Hs.610873 [show with all ESTs], Hs.711001 [show with all ESTs]Unigene Representative Sequences: NM_032554, AK1226593 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000436083(uc001ucz.3) ENST00000356987(uc001ucw.1) ENST00000432564
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for HCAR1 (see all 3)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for HCAR1
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript Custom all cDNA clones Services for HCAR1 | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for HCAR1 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat HCAR1 |
Additional cDNA sequence: AK122659.1 AK289557.1 5 DOTS entries: DT.100019050 DT.95320166 DT.91958104 DT.100787462 DT.91671859 3 AceView cDNA sequences: AK122659 AW848381 BG212812
GeneLoc Exon Structure
|
Expression
for HCAR1 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| HCAR1 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: ACATATGCTT
About this image
See HCAR1 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for HCAR1
SOURCE GeneReport for Unigene clusters: Hs.610873 Hs.711001
UniProtKB/Swiss-Prot: HCAR1_HUMAN, Q9BXC0Tissue specificity: Expressed abundantly in brown and white fat. It also detectable at lower levels in liver, kidney,skeletal muscle, brain and pituitary. Not detected in frontal, temporal and occipital lobes of the cortex, basalforebrain, caudate nucleus, nucleus accumbens and hippocampus
SABiosciences Expression via Pathway-Focused PCR Array including HCAR1:
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for HCAR1
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse, rat HCAR1 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat HCAR1 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat HCAR1 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HCAR1 |
Orthologs
for HCAR1 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of chordates.
Orthologs for HCAR1 gene from 1/8 species (see all 8) About this table
| Organism |
Taxonomic
classification |
Gene |
Description |
Human
Similarity |
Orthology
Type |
Details |
zebrafish
(Danio rerio) |
Actinopterygii |
si:ch211-140l13.26 |
si:ch211-140l13.2 |
23(a) |
possible ortholog |
20(42749494-42750660) |
ENSEMBL Gene Tree for HCAR1 (if available)
TreeFam Gene Tree for HCAR1 (if available) |
Paralogs
for HCAR1 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| Paralogs for HCAR1 gene
- OXER12 GPR312 HCAR32 HCAR22
9 SIMAP similar genes for HCAR1 using alignment to 1 protein entry: HCAR1_HUMAN:HCAR2 HCAR3 OXER1 GPR31 CYSLTR2 KPG_011
LPAR4 GPR35 GPR17
HCAR1 for paralogs About GeneDecksing
|
Genomic Variants
for HCAR1 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 12 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
|---|
HapMap Linkage Disequilibrium report for HCAR1 (123104824 - 123215390 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV) variations for HCAR1: -- | SABiosciences Cancer Mutation PCR Assays |
| | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing HCAR1 |
|
Disorders
/ Diseases
for HCAR1 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
HCAR1 for disorders About GeneDecksing
OMIM gene information: 606923
OMIM disorders: --
1  disease for HCAR1: About MalaCardsbreast cancer
Export disorders for HCAR1 gene to outside databases
|
Publications
for HCAR1 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for HCAR1 gene, integrated from 9 sources (see all 17):
(articles sorted by number of sources associating them with HCAR1) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- International union of basic and clinical pharmacology. LXXXII: nomenclature and classification of hydroxy-carboxylic acid receptors (GPR81, GPR109A, and GPR109B). (PubMed id 21454438)1, 2, 3 Offermanns S....Ijzerman A.P. (2011)
- Lactate inhibits lipolysis in fat cells through activation of an orphan G-protein-coupled receptor, GPR81. (PubMed id 19047060)1, 2, 3 Liu C.... Lovenberg T.W. (2009)
- Discovery and mapping of ten novel G protein-coupled receptor genes. (PubMed id 11574155)1, 2, 3 Lee D.K....O'Dowd B.F. (2001)
- Role of GPR81 in lactate-mediated reduction of adipose lipolysis. (PubMed id 18952058)1, 3 Cai T.Q....Waters M.G. (2008)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
- Identification of G protein-coupled receptor genes from the human genome sequence. (PubMed id 12044878)1, 2 Takeda S.... Mitaku S. (2002)
- Biological and pharmacological roles of HCA receptors. (PubMed id 21907911)1 Blad C.C....Offermanns S. (2011)
- Study of GPR81, the lactate receptor, from distant sp ecies identifies residues and motifs critical for GPR81 functions. (PubMed id 21862690)1 Kuei C....Liu C. (2011)
- Variation at the NFATC2 locus increases the risk of t hiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipr il and rosiglitazone Medication (DREAM) study. (PubMed id 20628086)1 Bailey S.D....Anand S. (2010)
- Gene-centric association signals for lipids and apoli poproteins identified via the HumanCVD BeadChip. (PubMed id 19913121)1 Talmud P.J.... . (2009)
|
External Searches for HCAR1 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing HCAR1 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing HCAR1 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing HCAR1 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for HCAR1 | Pharmacogenomics, SNPs, Pathways | | SeattleSNPs | http://pga.gs.washington.edu/data/gpr81/ |
|
| | |
About This Section
| Patent Information for HCAR1 gene:
Search GeneIP for patents involving HCAR1
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for HCAR1 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
About This Section
|
 | |
 | |
 |
| | |  | OriGene Antibodies for HCAR1 | | OriGene shRNA RFP for HCAR1 | | | OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for HCAR1 | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for HCAR1 | | | Browse OriGene Protein Over-expression Lysates | | Browse OriGene Fluorogenic Cell Assay Kits | | | OriGene siRNA for HCAR1 | | Browse 3'-UTR reporter clones for miRNA target validation | | | OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for HCAR1 | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for HCAR1 | | | Browse OriGene GFP tagged cDNA clones in CMV expression vector | | Browse OriGene MicroRNA Expression Plasmids | | | Browse OriGene basic RS shRNAs | | Browse OriGene validated miRNA SYBR primer pairs | | | Browse OriGene full length recombinant human proteins expressed in human HEK293 cells | | OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
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| | | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat HCAR1 | | | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing HCAR1 | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat HCAR1 | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat HCAR1 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat HCAR1 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat HCAR1 |
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| | | | Tocris compounds for HCAR1 |
| |  |  |  |  | | | | |
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 | | | HCAR1 Proteins, Antibodies, CLIAs, and ELISAs |
| | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HCAR1 |
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