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Aliases for HBZP1 Gene

Aliases for HBZP1 Gene

  • Hemoglobin Subunit Zeta Pseudogene 1 2 3 5
  • Hemoglobin, Zeta Pseudogene 1 2 3
  • Hemoglobin, Zeta Pseudogene 2
  • Zeta Globin Pseudogene 3
  • HBZ-T2 3
  • HBZ2P 3
  • HBZ2 3
  • HBZP 3

External Ids for HBZP1 Gene

Previous HGNC Symbols for HBZP1 Gene

  • HBZP

Previous GeneCards Identifiers for HBZP1 Gene

  • GC16P000214
  • GC16P000215
  • GC16P000216
  • GC16P000194
  • GC16P000199
  • GC16P000209
  • GC16P000217

Summaries for HBZP1 Gene

GeneCards Summary for HBZP1 Gene

HBZP1 (Hemoglobin Subunit Zeta Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HBZP1 Gene

Genomics for HBZP1 Gene

Regulatory Elements for HBZP1 Gene

Enhancers for HBZP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F000233 1 ENCODE 16.3 +73.8 73751 2.9 HDGF PKNOX1 ARNT WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 JMJD8 RHOT2 LOC105371038 WASH4P ENSG00000268836 ENSG00000259840 HBZP1 ENSG00000262528 ENSG00000260022 ENSG00000269482
GH16F000396 0.6 ENCODE 16.2 +238.7 238685 7.7 HDGF PKNOX1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 PAF1 NME4 ENSG00000261505 LOC105371038 JMJD8 HBZP1 PRSS29P WASH4P RHOT2 CAPN15 ENSG00000268836
GH16F000351 0.4 ENCODE 16.2 +192.7 192706 5.8 HDGF MLX ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ENSG00000261505 LOC105371038 TMEM8A JMJD8 HBZP1 PRSS29P WASH4P RHOT2 CAPN15 ENSG00000268836
GH16F000676 0.2 ENCODE 16.2 +516.2 516188 1.5 ARID4B SIN3A DMAP1 GLIS2 ZNF143 SP3 MYNN RCOR2 KDM1A BRD4 ENSG00000226890 HBZP1 PRSS29P JMJD8 LOC105371038 ENSG00000279441 RHBDL1
GH16F000678 0.6 ENCODE 16.2 +519.2 519211 3.7 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 KLF13 ZNF263 WFIKKN1 ENSG00000226890 JMJD8 HBZP1 PRSS29P ENSG00000260646 LOC105371038 ENSG00000228779 LOC105371184 RHBDL1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HBZP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HBZP1 Gene

Chromosome:
16
Start:
161,199 bp from pter
End:
165,526 bp from pter
Size:
4,328 bases
Orientation:
Plus strand

Genomic View for HBZP1 Gene

Genes around HBZP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HBZP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HBZP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HBZP1 Gene

Proteins for HBZP1 Gene

Post-translational modifications for HBZP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HBZP1 Gene

Domains & Families for HBZP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HBZP1 Gene

Function for HBZP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HBZP1 Gene

Localization for HBZP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HBZP1 Gene

Pathways & Interactions for HBZP1 Gene

SuperPathways for HBZP1 Gene

No Data Available

Interacting Proteins for HBZP1 Gene

Gene Ontology (GO) - Biological Process for HBZP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HBZP1 Gene

Transcripts for HBZP1 Gene

mRNA/cDNA for HBZP1 Gene

(2898) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HBZP1 Gene

No ASD Table

Relevant External Links for HBZP1 Gene

GeneLoc Exon Structure for
HBZP1
ECgene alternative splicing isoforms for
HBZP1

Expression for HBZP1 Gene

mRNA expression in normal human tissues for HBZP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of HBZP1 Gene:

HBZP1
genes like me logo Genes that share expression patterns with HBZP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HBZP1 Gene

Orthologs for HBZP1 Gene

Evolution for HBZP1 Gene

ENSEMBL:
Gene Tree for HBZP1 (if available)
TreeFam:
Gene Tree for HBZP1 (if available)

No data available for Orthologs for HBZP1 Gene

Paralogs for HBZP1 Gene

No data available for Paralogs for HBZP1 Gene

Variants for HBZP1 Gene

Relevant External Links for HBZP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HBZP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HBZP1 Gene

Disorders for HBZP1 Gene

No disorders were found for HBZP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HBZP1 Gene

Publications for HBZP1 Gene

  1. A review of the molecular genetics of the human alpha-globin gene cluster. (PMID: 2649166) Higgs D.R. … Weatherall D.J. (Blood 1989) 2 3 64
  2. Unusual features of CpG-rich (HTF) islands in the human alpha globin complex: association with non-functional pseudogenes and presence within the 3' portion of the zeta gene. (PMID: 2825132) Fischel-Ghodsian N. … Higgs D.R. (Nucleic Acids Res. 1987) 3 64
  3. Transcriptional analysis of human zeta globin genes. (PMID: 6745241) Proudfoot N.J. … Partington G.A. (EMBO J. 1984) 3 64
  4. Molecular basis of length polymorphism in the human zeta-globin gene complex. (PMID: 6308667) Goodbourn S.E. … Weatherall D.J. (Proc. Natl. Acad. Sci. U.S.A. 1983) 3 64
  5. The structure of the human zeta-globin gene and a closely linked, nearly identical pseudogene. (PMID: 6297773) Proudfoot N.J. … Maniatis T. (Cell 1982) 3 64

Products for HBZP1 Gene

Sources for HBZP1 Gene

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