HBEGF Gene
protein-coding GIFtS: 57
GC05M139694
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heparin-binding EGF-like growth factor (Previous name: diphtheria toxin receptor (heparin-binding epidermal growth factor-like growth factor) ) Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database (Previous symbols: HEGFL, DTS, DTR)
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Aliases & Descriptions for HBEGF
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
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| | | Descriptions |
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diphtheria toxin receptor (heparin-binding EGF-like growth factor) 2 | diphtheria toxin receptor (heparin-binding epidermal growth factor-like growth factor) 1, 2 | | heparin-binding EGF-like growth factor 2 | | heparin-binding epidermal growth factor 2 |
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| | Search outside databases for aliases for HBEGF gene |
Summaries for HBEGF(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: HBEGF_HUMAN, Q99075Function: May be involved in macrophage-mediated cellular proliferation. It is mitogenic for fibroblasts and smooth muscle but not endothelial cells. It is able to bind EGF receptors with higher affinity than EGF itself and is a far more potent mitogen for smooth muscle cells than EGF. Also acts as a diphtheria toxin receptorGene Wiki entry for HBEGF (Heparin-binding_EGF-like_growth_factor) |
Genomic Location for HBEGF
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the HBEGF gene 
Entrez Gene cytogenetic band: 5q23 Ensembl cytogenetic band: 5q31.3 HGNC cytogenetic band: 5q23HBEGF Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 5 GeneLoc Exon Structure GeneLoc location for GC05M139694:
(about GC identifiers)
Start:
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139,692,612 bp from pter |
End:
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139,706,359 bp from pter |
Size:
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13,748 bases |
Orientation:
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minus strand |
RefSeq DNA sequence:- NC_000005.8 NT_029289.10
| Proteins for HBEGF
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: HBEGF_HUMAN, Q99075 (See
protein sequence)Recommended Name: Proheparin-binding EGF-like growth factor precursor Size: 208 amino acids; 23067 Da
Subcellular location: Heparin-binding EGF-like growth factor: Secreted, extracellular space. Note=Mature HB-EGF is released into the extracellular space and probably binds to a receptor
Subcellular location: Proheparin-binding EGF-like growth factor: Cell membrane; Single-pass type I membrane protein
PDB structures from and Proteopedia :1XDT (3D)
 Post-translational modifications:
Several N-termini have been identified by direct sequencing. The forms with N-termini 63, 73 and 74 have been tested and found to be biologically active1
O-linked glycan attachment sites were determined by Edman degradation, O-glycanase digest suggests mucin-type glycosylation (done in HB-EGF purified from histiocytic lymphoma cell line U-937)1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_001936.1
ENSEMBL proteins: ENSP00000230990
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
5 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for HBEGF: Assays for HBEGF: | Protein
Domains/ Families for HBEGF(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q99075
ProtoNet protein and cluster: Q99075 2 Blocks protein families: IPB001336 Type I EGF signature IPB006210 Type I EGF
UniProtKB/Swiss-Prot: HBEGF_HUMAN, Q99075Similarity: Contains 1 EGF-like domain | Gene Function for HBEGF
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001945
Applied Biosystems Silencer® siRNAs for HBEGF
Sigma-Aldrich siRNA and siRNA Panels for HBEGF  Sigma-Aldrich shRNA for HBEGF  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001945                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001945                                  untagged cDNA clone in CMV expression vector: NM_001945 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001945
UniProtKB/Swiss-Prot: HBEGF_HUMAN, Q99075Function: May be involved in macrophage-mediated cellular proliferation. It is mitogenic for fibroblasts and smooth muscle but not endothelial cells. It is able to bind EGF receptors with higher affinity than EGF itself and is a far more potent mitogen for smooth muscle cells than EGF. Also acts as a diphtheria toxin receptor11 MGI mutant phenotypes (inferred from 5 alleles ) (MGI details for Hbegf):
4 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for HBEGF
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
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2 Sigma-Aldrich "Your Favorite Gene" Pathways for HBEGF (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for HBEGF 
5/36 Interacting proteins for HBEGF (ENSP000002309903) via UniProtKB, MINT, and/or STRING (see all 36
)About this table
5/7 Gene Ontology (GO) biological process terms (links to tree view) (see all 7
): About this table
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Drugs & Compounds for HBEGF(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for HBEGF 10/43 Novoseek chemical compound relationships for HBEGF gene (see all 43
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| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| diphtheria toxin |
71.19 |
6 |
7646457 (3), 8379922 (1) |
| heparan sulfate |
67.93 |
38 |
8578521 (1), 10037743 (1), 9438425 (1), 11320054 (1) (see all 19) |
| hcec |
64.34 |
6 |
18495812 (1), 15277479 (1), 16799022 (1) |
| tyrosine |
60.20 |
42 |
9334263 (2), 11798972 (2), 9110152 (1), 10579352 (1) (see all 34) |
| chondroitin sulfate |
52.46 |
8 |
1306684 (1), 16175577 (1), 11421350 (1), 12634322 (1) (see all 6) |
| thymidine |
47.64 |
11 |
10544013 (1), 10751853 (1), 8077234 (1), 9115748 (1) (see all 11) |
| chlorate |
47.44 |
1 |
8609052 (1) |
| 12-o-tetradecanoylphorbol 13-acetate |
42.33 |
31 |
9244191 (3), 16557002 (3), 7579712 (1), 8060360 (1) (see all 7) |
| v2o5 |
39.17 |
4 |
11159045 (1) |
| phosphatidylinositol |
34.03 |
4 |
18925469 (1), 8626392 (1), 14576062 (1), 16556679 (1) |
About this table
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Transcripts for HBEGF(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001945
Sigma-Aldrich siRNA and siRNA Panels for HBEGF  Sigma-Aldrich shRNA for HBEGF  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001945 REFSEQ mRNAs for HBEGF gene: NM_001945.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001945               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001945                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001945                                  untagged cDNA clone in CMV expression vector: NM_001945  Additional cDNA sequence: AK222688.1 AK307310.1 AK313202.1 BC033097.1 M60278.1 4 DOTS entries: DT.117292 DT.86851568 DT.99971739 DT.95270771 24/154 AceView cDNA sequences (see all 154
):CB159853 AI129680 BI910684 CA435723 BQ720838 BF594452 NM_001945 BF592951 AA343828 AI697686 D55114 AA425157 BQ416757 M60278 AI052201 AA410374 W39595 BC033097 CA433350 BM762311 BM761883 C04884 H46786 BX113822
highest scoring ESTs for HBEGF:M60278 AA161219 AA601605 AA857693 AA894749 AI023180 AI253252 AI697686 AI871611 AI971664 Unigene Cluster for HBEGF: Heparin-binding EGF-like growth factor Hs.799 [show with all ESTs]Unigene Representative Sequence: NM_001945
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000230990
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Expression for HBEGF
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| HBEGF expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for HBEGF
1 / 2 / 3 5 probe-sets matching HBEGF gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: --
SOURCE GeneReport for Unigene cluster: Hs.799
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Orthologs for HBEGF
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
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Orthologs for HBEGF gene from 5/7 species (see all 7
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About this table Species with no ortholog for HBEGF
ENSEMBL Gene Tree for HBEGF | Paralogs for HBEGF(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for HBEGF gene
- AREGB2 AREG2
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SNPs/Variants for HBEGF(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
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HapMap Linkage Disequilibrium images for HBEGF (up to first 250kb)
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Disorders & Mutations for HBEGF
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
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OMIM: 126150 10/88 Novoseek disease relationships for HBEGF gene (see all 88
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| diphtheria |
79.73 |
130 |
1939100 (3), 7980519 (3), 7622504 (3), 10547351 (3) (see all 63) |
| cystitis bacterial |
55.85 |
3 |
9334654 (2), 11378043 (1) |
| bladder diseases |
49.77 |
1 |
9334654 (1) |
| tumors |
42.80 |
99 |
1279186 (4), 15289334 (4), 15313912 (4), 16630129 (3) (see all 53) |
| gastric cancer |
39.74 |
23 |
8621250 (4), 19218109 (3), 11920609 (2), 14764442 (1) (see all 10) |
| pancreatic cancer |
38.15 |
24 |
8060360 (5), 15817123 (3), 10505759 (2), 15249209 (1) (see all 7) |
| carcinoma embryonal |
38.13 |
7 |
11169062 (1), 19152444 (1), 10902971 (1), 12507292 (1) (see all 7) |
| cancer |
36.26 |
40 |
18023415 (2), 12686563 (2), 16630129 (2), 8784471 (2) (see all 28) |
| intestinal ischemia |
34.49 |
9 |
11890738 (2), 18558204 (1), 11781977 (1), 10600353 (1) (see all 5) |
| bladder cancer |
30.55 |
10 |
16166300 (2), 17394193 (2), 17274952 (1), 15228094 (1) (see all 5) |
About this table
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Medical News for HBEGF(Possibly Related Articles in
Doctor's Guide)
About This Section
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Publications for HBEGF (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/704 PubMed articles for HBEGF gene (see all 704
):- Structure of heparin-binding EGF-like growth factor. Multiple forms, primary structure, and glycosylation of the mature protein. (PubMed id 1556128)1, 3, 4 Higashiyama S.... Klagsbrun M. (1992)
- Diphtheria toxin binds to the epidermal growth factor (EGF)-like domain of human heparin-binding EGF-like growth factor/diphtheria toxin receptor and inhibits specifically its mitogenic activity. (PubMed id 7836353)1, 3, 4 Mitamura T.... Mekada E. (1995)
- Mouse chromosomal location of three EGF receptor ligands: amphiregulin (Areg), betacellulin (Btc), and heparin-binding EGF (Hegfl). (PubMed id 7590736)1, 2, 3 Pathak B.G....Lee D.C. (1995)
- A heparin-binding growth factor secreted by macrophage-like cells that is related to EGF. (PubMed id 1840698)1, 3, 4 Higashiyama S.... Klagsbrun M. (1991)
- Crystal structure of the complex of diphtheria toxin with an extracellular fragment of its receptor. (PubMed id 9659904)1, 3, 4 Louie G.V.... Choe S. (1997)
- The DNA sequence and comparative analysis of human chromosome 5. (PubMed id 15372022)3, 4 Schmutz J.... Rubin E.M. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Dual source and target of heparin-binding EGF-like growth factor during the onset of implantation in the hamster. (PubMed id 12163414)2, 3 Wang X....Paria B.C. (2002)
- Heparin-binding EGF-like growth factor is an early response gene to chemotherapy and contributes to chemotherapy resistance. (PubMed id 17001310)1, 3 Wang F....Cusack J.C. (2007)
- The chemotherapeutic agent VP16 increases the stability of HB-EGF mRNA by a mechanism involving the 3'-UTR. (PubMed id 16996055)1, 3 Sorensen B.S....Nexo E. (2006)
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Search for HBEGF
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
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Genome Databases showing HBEGF
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing HBEGF
(According to HUGE)
About This Section
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Specialized Databases showing HBEGF(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
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| About This Section
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| Services for HBEGF(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
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 Products for HBEGF:

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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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