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Aliases for HAVCR1P1 Gene

Subcategory (RNA class) for HAVCR1P1 Gene

lncRNA

Aliases for HAVCR1P1 Gene

  • Hepatitis A Virus Cellular Receptor 1 Pseudogene 1 2 3
  • CTD-2027I19.2 5

External Ids for HAVCR1P1 Gene

ORGUL Members for HAVCR1P1 Gene

Previous GeneCards Identifiers for HAVCR1P1 Gene

  • GC19M024345

Summaries for HAVCR1P1 Gene

GeneCards Summary for HAVCR1P1 Gene

HAVCR1P1 (Hepatitis A Virus Cellular Receptor 1 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HAVCR1P1 Gene

Genomics for HAVCR1P1 Gene

Genomic Location for HAVCR1P1 Gene

Chromosome:
19
Start:
24,162,193 bp from pter
End:
24,163,447 bp from pter
Size:
1,255 bases
Orientation:
Minus strand

Genomic View for HAVCR1P1 Gene

Genes around HAVCR1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HAVCR1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HAVCR1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HAVCR1P1 Gene

No data available for Regulatory Elements for HAVCR1P1 Gene

Proteins for HAVCR1P1 Gene

Post-translational modifications for HAVCR1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HAVCR1P1 Gene

Domains & Families for HAVCR1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HAVCR1P1 Gene

Function for HAVCR1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HAVCR1P1 Gene

Localization for HAVCR1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HAVCR1P1 Gene

Pathways & Interactions for HAVCR1P1 Gene

SuperPathways for HAVCR1P1 Gene

No Data Available

Interacting Proteins for HAVCR1P1 Gene

Gene Ontology (GO) - Biological Process for HAVCR1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HAVCR1P1 Gene

Drugs & Compounds for HAVCR1P1 Gene

No Compound Related Data Available

Transcripts for HAVCR1P1 Gene

mRNA/cDNA for HAVCR1P1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HAVCR1P1 Gene

Hepatitis A virus cellular receptor 1 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HAVCR1P1 Gene

No ASD Table

Relevant External Links for HAVCR1P1 Gene

GeneLoc Exon Structure for
HAVCR1P1
ECgene alternative splicing isoforms for
HAVCR1P1

Expression for HAVCR1P1 Gene

mRNA expression in normal human tissues for HAVCR1P1 Gene

SOURCE GeneReport for Unigene cluster for HAVCR1P1 Gene Hs.744836

genes like me logo Genes that share expression patterns with HAVCR1P1: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for HAVCR1P1 Gene

Orthologs for HAVCR1P1 Gene

Evolution for HAVCR1P1 Gene

ENSEMBL:
Gene Tree for HAVCR1P1 (if available)
TreeFam:
Gene Tree for HAVCR1P1 (if available)

No data available for Orthologs for HAVCR1P1 Gene

Paralogs for HAVCR1P1 Gene

No data available for Paralogs for HAVCR1P1 Gene

Variants for HAVCR1P1 Gene

Sequence variations from dbSNP and Humsavar for HAVCR1P1 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs2278443 -- 24,163,730(+) GTTAA(C/T)CACTC upstream-variant-2KB
rs7343082 -- 24,162,177(+) CAGAA(A/G)GATTG downstream-variant-500B
rs35056816 -- 24,162,552(+) CTTTT(-/T)GGCAA nc-transcript-variant
rs17000565 -- 24,165,325(+) AAGCA(C/G)AGAAC upstream-variant-2KB
rs34419057 -- 24,162,772(+) CTCCC(-/C)TGAAG nc-transcript-variant

Relevant External Links for HAVCR1P1 Gene

HapMap Linkage Disequilibrium report
HAVCR1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HAVCR1P1 Gene

Disorders for HAVCR1P1 Gene

Relevant External Links for HAVCR1P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HAVCR1P1

No disorders were found for HAVCR1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HAVCR1P1 Gene

Publications for HAVCR1P1 Gene

No publications were found for HAVCR1P1 Gene.

Products for HAVCR1P1 Gene

Sources for HAVCR1P1 Gene

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