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Aliases for HAS2-AS1 Gene

Subcategory (RNA class) for HAS2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for HAS2-AS1 Gene

  • HAS2 Antisense RNA 1 2 3 5
  • HAS2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • HAS2 Antisense RNA (Non-Protein Coding) 2 3
  • Hyaluronan Synthase 2 Antisense 2 3
  • Non-Protein Coding RNA 77 2
  • NCRNA00077 3
  • HAS2-AS 3
  • HAS2AS 3
  • HASNT 3

External Ids for HAS2-AS1 Gene

Previous HGNC Symbols for HAS2-AS1 Gene

  • HAS2AS
  • HAS2-AS

Previous GeneCards Identifiers for HAS2-AS1 Gene

  • GC08P122651

Summaries for HAS2-AS1 Gene

GeneCards Summary for HAS2-AS1 Gene

HAS2-AS1 (HAS2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HAS2-AS1 Gene

Genomics for HAS2-AS1 Gene

Regulatory Elements for HAS2-AS1 Gene

Promoters for HAS2-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around HAS2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HAS2-AS1 Gene

Chromosome:
8
Start:
121,639,293 bp from pter
End:
121,645,325 bp from pter
Size:
6,033 bases
Orientation:
Plus strand

Genomic View for HAS2-AS1 Gene

Genes around HAS2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HAS2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HAS2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HAS2-AS1 Gene

Proteins for HAS2-AS1 Gene

Post-translational modifications for HAS2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HAS2-AS1 Gene

Domains & Families for HAS2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HAS2-AS1 Gene

Function for HAS2-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HAS2-AS1 Gene

Localization for HAS2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HAS2-AS1 Gene

Pathways & Interactions for HAS2-AS1 Gene

SuperPathways for HAS2-AS1 Gene

No Data Available

Interacting Proteins for HAS2-AS1 Gene

Gene Ontology (GO) - Biological Process for HAS2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HAS2-AS1 Gene

Drugs & Compounds for HAS2-AS1 Gene

No Compound Related Data Available

Transcripts for HAS2-AS1 Gene

mRNA/cDNA for HAS2-AS1 Gene

(2) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HAS2-AS1 Gene

HAS2 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HAS2-AS1 Gene

No ASD Table

Relevant External Links for HAS2-AS1 Gene

GeneLoc Exon Structure for
HAS2-AS1
ECgene alternative splicing isoforms for
HAS2-AS1

Expression for HAS2-AS1 Gene

mRNA expression in normal human tissues for HAS2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for HAS2-AS1 Gene

This gene is overexpressed in Testis (x9.2).

SOURCE GeneReport for Unigene cluster for HAS2-AS1 Gene Hs.668686

genes like me logo Genes that share expression patterns with HAS2-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for HAS2-AS1 Gene

Orthologs for HAS2-AS1 Gene

Evolution for HAS2-AS1 Gene

ENSEMBL:
Gene Tree for HAS2-AS1 (if available)
TreeFam:
Gene Tree for HAS2-AS1 (if available)

No data available for Orthologs for HAS2-AS1 Gene

Paralogs for HAS2-AS1 Gene

No data available for Paralogs for HAS2-AS1 Gene

Variants for HAS2-AS1 Gene

Sequence variations from dbSNP and Humsavar for HAS2-AS1 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs1837856 -- 121,644,922(+) TTACA(C/T)AGGCT nc-transcript-variant
rs1813372 -- 121,645,465(+) ttatt(A/T)ttttt downstream-variant-500B
rs1866966 -- 121,644,348(+) ACCCA(A/T)ACCTG nc-transcript-variant
rs10106294 -- 121,645,368(+) TAACC(A/G)TTTAT downstream-variant-500B
rs57643016 -- 121,645,497(+) TCTAT(C/T)ACCCA downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for HAS2-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv831446 CNV Loss 17160897

Relevant External Links for HAS2-AS1 Gene

HapMap Linkage Disequilibrium report
HAS2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HAS2-AS1 Gene

Disorders for HAS2-AS1 Gene

Relevant External Links for HAS2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HAS2-AS1

No disorders were found for HAS2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HAS2-AS1 Gene

Publications for HAS2-AS1 Gene

  1. Natural antisense transcript for hyaluronan synthase 2 (HAS2-AS1) induces transcription of HAS2 via protein O-GlcNAcylation. (PMID: 25183006) Vigetti D. … Passi A. (J. Biol. Chem. 2014) 3 67
  2. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q. … O'Donnell C.J. (BMC Med. Genet. 2007) 3
  3. Natural antisense mRNAs to hyaluronan synthase 2 inhibit hyaluronan biosynthesis and cell proliferation. (PMID: 15843373) Chao H. … Spicer A.P. (J. Biol. Chem. 2005) 3
  4. Changed lamellipodial extension, adhesion plaques and migration in epidermal keratinocytes containing constitutively expressed sense and antisense hyaluronan synthase 2 (Has2) genes. (PMID: 12186949) Rilla K. … Tammi R. (J. Cell. Sci. 2002) 23

Products for HAS2-AS1 Gene

Sources for HAS2-AS1 Gene

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