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HAS2 Gene

protein-coding   GIFtS: 56

GC08M122694
hyaluronan synthase 2
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
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Aliases
EC 2.4.1.212 3
MGC126241 2
MGC126242 2
Descriptions
HA synthase 2 3
Hyaluronate synthase 2 2, 3
Hyaluronic acid synthase 2 2, 3
hyaluronan synthase 2 2
External Ids
HGNC: 48191
Entrez Gene: 30372
UniProtKB: Q928193
Ensembl: ENSG000001709617
Search outside databases for aliases for HAS2 gene

Previous GC identifers: GC08M121594 GC08M122683 GC08M122294 GC08M122582

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for HAS2:
Hyaluronan or hyaluronic acid (HA) is a high molecular weight unbranched polysaccharide synthesized
by a wide variety of organisms from bacteria to mammals, and is a constituent of the extracellular
matrix. It consists of alternating glucuronic acid and N-acetylglucosamine residues that are
linked by beta-1-3 and beta-1-4 glycosidic bonds. HA is synthesized by membrane-bound synthase at
the inner surface of the plasma membrane, and the chains are extruded through pore-like structures
into the extracellular space. It serves a variety of functions, including space filling,
lubrication of joints, and provision of a matrix through which cells can migrate. HA is actively
produced during wound healing and tissue repair to provide a framework for ingrowth of blood
vessels and fibroblasts. Changes in the serum concentration of HA are associated with inflammatory
and degenerative arthropathies such as rheumatoid arthritis. In addition, the interaction of HA
with the leukocyte receptor CD44 is important in tissue-specific homing by leukocytes, and
overexpression of HA receptors has been correlated with tumor metastasis. HAS2 is a member of the
newly identified vertebrate gene family encoding putative hyaluronan synthases, and its amino acid
sequence shows significant homology to glycosaminoglycan synthetase (DG42) from Xenopus laevis,
and human and murine hyaluronan synthase 1. [provided by RefSeq]

UniProtKB/Swiss-Prot: HAS2_HUMAN, Q92819
Function: Plays a role in hyaluronan/hyaluronic acid (HA) synthesis

Gene Wiki entry for HAS2

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
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Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the HAS2 gene  

Entrez Gene cytogenetic band: 8q24.12   Ensembl cytogenetic band:  8q24.13   HGNC cytogenetic band: 8q24.12

HAS2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 8         GeneLoc Exon Structure

GeneLoc location for GC08M122694:     (about GC identifiers)

Start:
122,694,719 bp from pter
End:
122,722,811 bp from pter
Size:
28,093 bases
Orientation:
minus strand
RefSeq DNA sequence:
NC_000008.9  NT_008046.15  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
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UniProtKB/Swiss-Prot: HAS2_HUMAN, Q92819 (See protein sequence)
Recommended Name: Hyaluronan synthase 2  
Size: 552 amino acids; 63566 Da
Cofactor: Magnesium
Subcellular location: Membrane; Multi-pass membrane protein (Probable)
Secondary accessions: Q32MM3

REFSEQ proteins: NP_005319.1  

ENSEMBL proteins: 
ENSP00000306991 


Human Recombinant Proteins 
Browse Drug Discovery Central at Invitrogen for human recombinant proteins
Browse Purified and Recombinant Proteins at Millipore
Browse Human Recombinant Proteins at Sigma-Aldrich  
Browse R&D Systems for human recombinant proteins
Browse recombinant and purified proteins available from Enzo Life Sciences
Recombinant Proteins from Abcam (Hyaluronan synthase 2)
Human Recombinant Proteins from Abnova (HAS2)
                Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

2 Gene Ontology (GO) cellular component terms (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0005887 integral to plasma membrane TAS9169154
GO:0016020 membrane IEA--
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Antibodies for HAS2: 
Browse Antibodies Central at Invitrogen
Browse Millipore's Extensive Line of Mono- and Polyclonal Antibodies
Browse Antibodies at Sigma-Aldrich
Browse R&D Systems for Antibodies
Antibodies from Abcam (Hyaluronan synthase 2), each with their AbpromiseSM
Browse Abnova for Monoclonal and Polyclonal Antibodies
Search Novus for antibodies for HAS2

Assays for HAS2: 
Browse Invitrogen for biochemical assays
Browse Kits and Assays available from Millipore
Browse R&D Systems for biochemical assays
Browse biochemical assays available from Enzo Life Sciences

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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1 InterPro domain/family:
 IPR001173 Glyco_trans_2


   GeneDecks  HAS2 for the domains selected above  
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Graphical View of Domain Structure for InterPro Entry Q92819

ProtoNet protein and cluster: Q92819

1 Blocks protein family: IPB001173 Glycosyl transferase

UniProtKB/Swiss-Prot: HAS2_HUMAN, Q92819
Similarity: Belongs to the nodC/HAS family

(According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
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Inhib.
RNA:
Invitrogen RNAi Products for gene knock-down (HAS2)
Browse for Gene Knock-down Tools from Millipore
Browse Abnova for Chimera RNAi Products
              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_005328

              Applied Biosystems Silencer® siRNAs for HAS2

              Sigma-Aldrich siRNA and siRNA Panels for HAS2  
                     Sigma-Aldrich shRNA for HAS2  
                     Explore Sigma-Aldrich super-pooled esiRNAs  

Clones:Browse Clone Ranger at Invitrogen for clones
Browse Clones for the Expression of Recombinant Proteins Available from Millipore
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_005328
                                 Myc/DDK tagged cDNA clone in CMV expression vector: NM_005328
                                 untagged cDNA clone in CMV expression vector: NM_005328 

Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
              OriGene genome-wide validated SYBR primer pairs: NM_005328

UniProtKB/Swiss-Prot: HAS2_HUMAN, Q92819
Function: Plays a role in hyaluronan/hyaluronic acid (HA) synthesis
Catalytic activity: UDP-alpha-N-acetyl-D-glucosamine +
beta-D-glucuronosyl-(1->3)-N-acetyl-beta-D-glucosaminyl-(1->4)-(nascent hyaluronan) = UDP +
N-acetyl-beta-D-glucosaminyl-(1->4)-beta-D-glucuronosyl-(1->3)-N-acetyl-beta-D-glucosaminyl-(1->4)-(nascent
hyaluronan)
Catalytic activity: UDP-alpha-D-glucuronate +
N-acetyl-beta-D-glucosaminyl-(1->4)-beta-D-glucuronosyl-(1->3)-(nascent hyaluronan) = UDP +
beta-D-glucuronosyl-(1->3)-N-acetyl-beta-D-glucosaminyl-(1->4)-beta-D-glucuronosyl-(1->3)-(nascent
hyaluronan)
Enzyme Number (IUBMB): EC 2.4.1.212 

Genatlas biochemistry entry for HAS2:
hyaluronan synthase gene 2

6 MGI mutant phenotypes (inferred from 1 allele(MGI details for Has2):

embryogenesisgrowth/sizehomeostasis/metabolismlethality-prenatal/perinatal
muscle

2 Gene Ontology (GO) molecular function terms (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0016757 transferase activity, transferring glycosyl groups IEA--
GO:0050501 hyaluronan synthase activity IEA--
About this table

(Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
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1 Invitrogen iPath™ Online BioAtlas - Pathway for HAS2 (Maps provided by GeneGo):
 Sphingolipid metabolism

   GeneDecks  HAS2 for the pathways selected above  
About GeneDecksing

UniProtKB/Swiss-Prot: HAS2_HUMAN, Q92819
Pathway: Glycan biosynthesis; hyaluronan biosynthesis

 Gene Network CentralTM Interacting Genes and Proteins Network for  HAS2 


5/13 Interacting proteins for HAS2 (ENSP000003069913) via UniProtKB, MINT, and/or STRING (see all 13 )

InteractantInteraction Details
GeneCardExternal ID(s)
TGFB1ENSP000002219303STRING (score=.946)
BMP7ENSP000003603403STRING (score=.919)
BMP2ENSP000003681043STRING (score=.886)
SPP1ENSP000002376233STRING (score=.841)
PTGS2ENSP000003564383STRING (score=.791)
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(Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
About This Section

Browse drugs & compounds from Enzo Life Sciences
Browse Small Molecules at Sigma-Aldrich

Browse Tocris compounds for HAS2
9 Novoseek chemical compound relationships for HAS2 gene
Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
glycosaminoglycan 77.58 2 12757764 (1)
tgf beta1 43.52 3 16733556 (2)
matrigel 36.01 4 17315194 (1), 19231585 (1)
phosphoinositide 35.44 2 12954618 (1), 17324121 (1)
lipid 0.00 1 19348124 (1)
glucose 0.00 4 16733556 (2), 11318944 (2)
steroid 0.00 1 15317739 (1)
zinc 0.00 1 14757176 (1)
tyrosine 0.00 1 15905585 (1)
About this table


(GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView,
non coding RNAs according to RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from Invitrogen, Millipore, and/or Abnova,
siRNAs from Applied Biosystems, Sigma-Aldrich,
shRNA from Sigma-Aldrich, OriGene,
Tagged/untagged cDNA clones from OriGene,
Expression Assays from Applied Biosystems)
About This Section

Inhib.
RNA:
Invitrogen RNAi Products for gene knock-down (HAS2)
Browse for Gene Knock-down Tools from Millipore
Browse Abnova for Chimera RNAi Products
              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_005328

              Sigma-Aldrich siRNA and siRNA Panels for HAS2  
                     Sigma-Aldrich shRNA for HAS2  
                     Explore Sigma-Aldrich super-pooled esiRNAs  

Applied Biosystems Silencer® siRNAs: 

NM_005328  

REFSEQ mRNAs for HAS2 gene: 

NM_005328.2   

Applied Biosystems TaqMan ® Gene Expression Assays: 

NM_005328  

              OriGene GFP tagged cDNA clone in CMV expression vector: NM_005328
                                 Myc/DDK tagged cDNA clone in CMV expression vector: NM_005328
                                 untagged cDNA clone in CMV expression vector: NM_005328 

Additional cDNA sequence: 

AK297724.1 BC069353.1 BC109071.1 BC109072.1 U54804.1 

3 DOTS entries:

DT.209587  DT.204245  DT.120637507 

24/35 AceView cDNA sequences (see all 35 ):

BM975166 AW068929 AI079360 BC069353 CA448459 AU280488 AI753259 BE296170 
BF941195 AW069182 CD643217 AA579772 AI087079 U54804 AI374739 BF436141 
AI769070 W49820 AA742706 AI754826 NM_005328 BX506849 BX956318 AA113093 

highest scoring ESTs for HAS2:

U54804 AA113093 AI142961 BC069353 BU621993 BX956318 CD654109 AA334184 AA579772 AI087079 

Unigene Cluster for HAS2:

Hyaluronan synthase 2
Hs.159226  [show with all ESTs]
Unigene Representative Sequence: NM_005328


GeneLoc Exon Structure

1 Ensembl transcript including schematic representation:
ENST00000303924  
(Experimental results according to 1GeneNote and GNF BioGPS,
probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
Expression Assays from Applied Biosystems )
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HAS2 expression in normal and diseased human tissues

 Applied Biosystems TaqMan ® Gene Expression Assays for HAS2

1 / 2 / 3

3 probe-sets matching HAS2 gene


Affymetrix
probe-set
Array  GeneAnnot data GeneNote data GeneTide data
# genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

35396_at2, 3 U95-A 1 1.00 1.00 1.00 1.00 U54804 1.00 1.00 1.00 1

206432_at2, 3 U133-A 1 1.00 1.00 -- -- NM_005328 0.60 1.00 0.82 1

206432_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
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Data from (Publications) and GNF BioGPS
    About these images
About these images

CGAP SAGE TAG: GAAGAAAAGG

SOURCE GeneReport for Unigene cluster: Hs.159226

Expression variation in blood from EXPOLDB for HAS2

UniProtKB/Swiss-Prot: HAS2_HUMAN, Q92819
Tissue specificity: Expressed in fibroblasts

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
About This Section


Orthologs for HAS2 gene from 5/8 species (see all 8 )
Organism Gene Locus Description Human
Similarity
NCBI accessions
dog
(Canis familiaris)
HAS21   -- hyaluronan synthase 2 93.96(n)
99.46(a)
482032  XM_539153.2  XP_539153.1 
chimpanzee
(Pan troglodytes)
HAS21   -- hyaluronan synthase 2 99.82(n)
100(a)
472850  XM_528222.2  XP_528222.2 
cow
(Bos taurus)
HAS21   -- hyaluronan synthase 2 93.6(n)
98.73(a)
281220  NM_174079.2  NP_776504.1 
rat
(Rattus norvegicus)
Has21   -- hyaluronan synthase 2 91.43(n)
98.37(a)
25694  NM_013153.1  NP_037285.1 
mouse
(Mus musculus)
Has21, 5 15 (31.20 cM)5
hyaluronan synthase 21, 5 90.7(n)1
98.73(a)1
151171  NM_008216.21  NP_032242.21 
 AI1221565  AK0797295  (see all 10)
About this table        Species with no ortholog for HAS2

ENSEMBL Gene Tree for HAS2
(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section

Paralogs for HAS2 gene
HAS12  HAS32  

(According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
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10/180 NCBI SNPs in HAS2 are shown (see all 180 )
(Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 83)
ABGenomic DataTranscription DataAllele Frequencies
SNP IDValidChr 8 posSequenceRecsAA
Chg
TypeMoreRecsAllele
freq
PopTotal
sample
More
------------
rs41232201,2
A,C,F,H122723832(+) CTTGGT/ACCTTG 1 -- ng316Minor allele frequency- A:0.48EU WA EA 658
rs10573081,2
A,C,F,H122722428(+) TTTAAG/AAAGGA 1 -- ut514Minor allele frequency- A:0.49EU EA WA 418
--
rs38532531,2
A,C122722535(+) AAAAAA/TTATGC 1 -- ut510--------
rs168957781,2
F,H122694569(+) GTTTTG/CTCCAG 1 -- ut317Minor allele frequency- C:0.02NA EU EA WA 562
--
rs78373221,2
A,C122722537(+) AAATTA/TTGCTT 1 -- ut51 ese30--------
--
rs38664651,2
C122722583(+) tctttC/G/Tttttt 1 -- ut51 trp30--------
rs10573151,2
C122695013(-) AAATTC/G/TTGTAT 1 -- ut310--------
rs78316851,2
H122694913(+) aatttT/Cttaag 1 -- ut314Minor allele frequency- C:0.00EU EA WA 402
rs353756181,2
F122696160(+) AGATAT/CTCTAT 1 E/E syn11Minor allele frequency- C:0.04NA 44
rs359895661,2
F122696049(+) ATAATC/TGCTTC 1 A/A syn11Minor allele frequency- T:0.04NA 68
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HapMap Linkage Disequilibrium images for HAS2 (up to first 250kb)

(in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
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OMIM: 601636

UniProtKB/Swiss-Prot: HAS2_HUMAN, Q92819
  • A chromosomal rearrangement involving HAS2 may be a cause of lipoblastomas, which are
    benign tumors resulting from transformation of adipocytes, usually diagnosed in children. 8q12.1
    to 8q24.1 intrachromosomal rearrangement with PLAG1
  • 10/15 Novoseek disease relationships for HAS2 gene (see all 15 )

    Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    colon carcinoma 50.26 2 19231585 (1)
    osteosarcoma 36.97 8 16540432 (3), 15922739 (2), 10861215 (1), 11171074 (1)
    tumors 27.57 14 16816377 (2), 17315194 (1), 19218337 (1), 16807238 (1) (see all 8)
    metastasis 26.47 4 19218337 (1)
    atherosclerosis 17.03 1 14752026 (1)
    prostate cancer 11.63 1 16816377 (1)
    necrosis 10.73 1 16818886 (1)
    inflammation 8.67 1 17234708 (1)
    cancer 4.13 2 16540432 (1), 14566823 (1)
    ovarian cancer 3.60 1 15375493 (1)
    About this table

    Human Genome Epidemiology Navigator: HAS2 (1 document)

    (Possibly Related Articles in Doctor's Guide)
    About This Section

      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/130 PubMed articles for HAS2 gene (see all 130 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 3037 HGNC: 4819 AceView: HAS2 Ensembl:ENSG00000170961 euGenes: HUgn3037
    ECgene: HAS2 H-InvDB: HAS2
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

    NameDescription
    ATLAS Chromosomes in Cancer entry for HAS2 Genetics and Cytogenetics in Oncology and Haematology
    GGDBhttp://riodb.ibase.aist.go.jp/rcmg/ggdb/
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



    Products for HAS2:
     TaqMan ® Gene Expression Assays
     TaqMan ® Genotyping Assays
      Free SNP selection tool



      Invitrogen iPath Pathways  Invitrogen BLOCK-iT™ RNAi
      Invitrogen Antibodies  Invitrogen Assays
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     Millipore Immunoassay Services
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     Predesigned and custom siRNAs for HAS2 Browse antibodies at Sigma-Aldrich
     Explore super-pooled esiRNAs Browse proteins at Sigma-Aldrich
     Lentivirus-delivered shRNAs for HAS2 Browse small molecules at Sigma-Aldrich
     "Your Favorite Gene" Pathwaysfeedback


      
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