 |
 | Services
| |
 |
Aliases & Descriptions for HAS1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EC 2.4.1.212 3 | | HAS 2, 3 | | HuHAS1 3 |
| | | Descriptions |
|---|
| HA synthase 1 2, 3 | | Hyaluronate synthase 1 2, 3 | | Hyaluronic acid synthase 1 2, 3 | | hyaluronan synthase 1 2 |
|
| | Search outside databases for aliases for HAS1 genePrevious GC identifers: GC19M052846 GC19M052577 GC19M056892 |
Summaries for HAS1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for HAS1: Hyaluronan or hyaluronic acid (HA) is a high molecular weight unbranched polysaccharide synthesized by a wide variety of organisms from bacteria to mammals, and is a constituent of the extracellular matrix. It consists of alternating glucuronic acid and N-acetylglucosamine residues that are linked by beta-1-3 and beta-1-4 glycosidic bonds. HA is synthesized by membrane-bound synthase at the inner surface of the plasma membrane, and the chains are extruded through pore-like structures into the extracellular space. It serves a variety of functions, including space filling, lubrication of joints, and provision of a matrix through which cells can migrate. HA is actively produced during wound healing and tissue repair to provide a framework for ingrowth of blood vessels and fibroblasts. Changes in the serum concentration of HA are associated with inflammatory and degenerative arthropathies such as rheumatoid arthritis. In addition, the interaction of HA with the leukocyte receptor CD44 is important in tissue-specific homing by leukocytes, and overexpression of HA receptors has been correlated with tumor metastasis. HAS1 is a member of the newly identified vertebrate gene family encoding putative hyaluronan synthases, and its amino acid sequence shows significant homology to the hasA gene product of Streptococcus pyogenes, a glycosaminoglycan synthetase (DG42) from Xenopus laevis, and a recently described murine hyaluronan synthase. [provided by RefSeq] UniProtKB/Swiss-Prot: HAS1_HUMAN, Q92839Function: Plays a role in hyaluronan/hyaluronic acid (HA) synthesis. Also able to catalyze the synthesis of chito-oligosaccharide depending on the substrateGene Wiki entry for HAS1 |
Genomic Location for HAS1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the HAS1 gene 
Entrez Gene cytogenetic band: 19q13.4 Ensembl cytogenetic band: 19q13.33 HGNC cytogenetic band: 19q13.3-q13.4HAS1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 19 GeneLoc Exon Structure GeneLoc location for GC19M056908:
(about GC identifiers)
Start:
|
56,908,177 bp from pter |
End:
|
56,919,049 bp from pter |
Size:
|
10,873 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000019.8 NT_011109.15
| Proteins for HAS1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: HAS1_HUMAN, Q92839 (See
protein sequence)Recommended Name: Hyaluronan synthase 1 Size: 578 amino acids; 64832 Da
Cofactor: Magnesium
Subcellular location: Membrane; Multi-pass membrane protein (Probable)
Secondary accessions: Q14470 Q9NS49Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_001514.2
ENSEMBL proteins: ENSP00000222115 ENSP00000365928 ENSP00000365927
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for HAS1: Assays for HAS1: | Protein
Domains/ Families for HAS1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q92839
ProtoNet protein and cluster: Q92839 1 Blocks protein family: IPB001173 Glycosyl transferase
UniProtKB/Swiss-Prot: HAS1_HUMAN, Q92839Similarity: Belongs to the nodC/HAS family | Gene Function for HAS1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|                OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): BC035837
Applied Biosystems Silencer® siRNAs for HAS1
Sigma-Aldrich siRNA and siRNA Panels for HAS1  Sigma-Aldrich shRNA Panels and shRNA for HAS1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001523                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001523                                  untagged cDNA clones in CMV expression vector (see all 2): BC035837 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001523
UniProtKB/Swiss-Prot: HAS1_HUMAN, Q92839Function: Plays a role in hyaluronan/hyaluronic acid (HA) synthesis. Also able to catalyze the synthesis of chito-oligosaccharide depending on the substrateCatalytic activity: UDP-alpha-N-acetyl-D-glucosamine + beta-D-glucuronosyl-(1->3)-N-acetyl-beta-D-glucosaminyl-(1->4)-(nascent hyaluronan) = UDP + N-acetyl-beta-D-glucosaminyl-(1->4)-beta-D-glucuronosyl-(1->3)-N-acetyl-beta-D-glucosaminyl-(1->4)-(nascent hyaluronan)Catalytic activity: UDP-alpha-D-glucuronate + N-acetyl-beta-D-glucosaminyl-(1->4)-beta-D-glucuronosyl-(1->3)-(nascent hyaluronan) = UDP + beta-D-glucuronosyl-(1->3)-N-acetyl-beta-D-glucosaminyl-(1->4)-beta-D-glucuronosyl-(1->3)-(nascent hyaluronan)Enzyme Number (IUBMB): EC 2.4.1.212 Genatlas biochemistry entry for HAS1:hyaluronan synthase gene 13 Gene Ontology (GO) molecular function terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005515 | protein binding |
IPI | 17353931 | | GO:0016757 | transferase activity, transferring glycosyl groups |
IEA | -- | | GO:0050501 | hyaluronan synthase activity |
IEA | -- | About this table | Pathways & Interactions for HAS1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| 1 Sigma-Aldrich "Your Favorite Gene" Pathway for HAS1 (Your Favorite Gene powered by Ingenuity) 
UniProtKB/Swiss-Prot: HAS1_HUMAN, Q92839Pathway: Glycan biosynthesis; hyaluronan biosynthesis Gene Network CentralTM Interacting Genes and Proteins Network for HAS1 
5/8 Interacting proteins for HAS1 (ENSP000002221153 Q928391) via UniProtKB, MINT, and/or STRING (see all 8
)About this table
2 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for HAS1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for HAS1 1 Novoseek chemical compound relationship for HAS1 gene
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| glycosaminoglycan |
73.21 |
1 |
8798544 (1) |
About this table
|
Transcripts for HAS1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|                OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): BC035837
Sigma-Aldrich siRNA and siRNA Panels for HAS1  Sigma-Aldrich shRNA Panels and shRNA for HAS1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001523 REFSEQ mRNAs for HAS1 gene: NM_001523.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001523               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001523                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001523                                  untagged cDNA clones in CMV expression vector (see all 2): BC035837  Additional cDNA sequence: AY916555.1 AY916556.1 BC035837.1 CR602106.1 D84424.1 U59269.1 3 DOTS entries: DT.303900 DT.100711622 DT.97833965 21 AceView cDNA sequences:CR602106 BQ772231 BG707608 AL545447 U59269 BI753116 NM_001523 BC035837 BG707429 BM543754 BM544718 AL571167 D84424 AW873943 BQ447523 BX281117 BX327795 BQ002782 CB266804 BF000543 BM083486
highest scoring ESTs for HAS1:BC035837 D84424 U59269 AL545447 AW873943 BF000543 BG707429 BG707608 BI753116 BM083486 Unigene Cluster for HAS1: Hyaluronan synthase 1 Hs.57697 [show with all ESTs]Unigene Representative Sequence: BC035837
GeneLoc Exon Structure
5 Alternative Splicing Database (ASD) splice patterns (SP) for HAS1
| ExUns: | 1 | ^ | 2a | · | 2b | · | 2c | ^ | 3 | ^ | 4a | · | 4b | ^ | 5a | · | 5b | · | 5c | |
| SP1: | |   | - |   | |   | |   | |   | |   | - |   | - |   | |   | |   | |
| SP2: | |   | - |   | |   | |   | |   | |   | - |   | - |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | - |   | - |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | - |   | - |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for HAS1
3 Ensembl transcripts including schematic representations: ENST00000222115
ENST00000376738
ENST00000376737
|
Expression for HAS1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| HAS1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for HAS1
1 / 2 / 3 3 probe-sets matching HAS1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TTGACGCTGT
SOURCE GeneReport for Unigene cluster: Hs.57697
Expression variation in blood from EXPOLDB for HAS1 UniProtKB/Swiss-Prot: HAS1_HUMAN, Q92839Tissue specificity: Highly expressed in ovary followed by spleen, thymus, prostate, testes and large intestine. Weakly expressed in small intestine |
Orthologs for HAS1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for HAS1 gene from 4 species
About this table Species with no ortholog for HAS1
ENSEMBL Gene Tree for HAS1 | Paralogs for HAS1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for HAS1 gene
- HAS32 HAS22
|
SNPs/Variants for HAS1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for HAS1 (up to first 250kb)
|
Disorders & Mutations for HAS1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 601463
9 Novoseek disease relationships for HAS1 gene
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| waldenstrom macroglobulinemia |
61.08 |
6 |
18815290 (2), 15794859 (1) |
| rheumatoid arthritis |
25.82 |
2 |
15763928 (1), 15535829 (1) |
| osteoarthritis |
23.33 |
2 |
15763928 (1), 15535829 (1) |
| ovarian cancer |
15.22 |
2 |
15375493 (2) |
| tumors |
10.63 |
8 |
14676202 (1), 15763928 (1), 17230515 (1), 17315194 (1) (see all 7) |
| necrosis |
0.00 |
2 |
14676202 (1), 15763928 (1) |
| cancer |
0.00 |
2 |
14566823 (1), 15231668 (1) |
| inflammation |
0.00 |
2 |
18393848 (1), 16904269 (1) |
| breast cancer |
0.00 |
3 |
17315194 (1), 16642399 (1) |
About this table
Genetic Association Database: HAS1 Human Genome Epidemiology Navigator: HAS1 (1 document)
|
Medical News for HAS1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for HAS1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/79 PubMed articles for HAS1 gene (see all 79
):- Potential impact of a single nucleotide polymorphism in the hyaluronan synthase 1 gene in Waldenstrom's macroglobulinemia. (PubMed id 15794859)1, 3, 6 Adamia S....Pilarski L.M. (2005)
- Chromosomal localization of the human and mouse hyaluronan synthase genes. (PubMed id 9169154)1, 2, 3 Spicer A.P....McDonald J.A. (1997)
- Functional cloning of the cDNA for a human hyaluronan synthase. (PubMed id 8798544)1, 3, 4 Shyjan A.M.... Briskin M.J. (1996)
- Molecular cloning of human hyaluronan synthase. (PubMed id 8651928)3, 4 Itano N. and Kimata K. (1996)
- Intronic splicing of hyaluronan synthase 1 (HAS1): a biologically relevant indicator of poor outcome in multiple myeloma. (PubMed id 15731173)1, 3 Adamia S....Pilarski L.M. (2005)
- Inherited and acquired variations in the hyaluronan synthase 1 (HAS1) gene may contribute to disease progression in multiple myeloma and Waldenstrom macroglobulinemia. (PubMed id 18815290)1, 3 Adamia S....Pilarski L.M. (2008)
- Adenovirus-mediated gene transfer of mutated IkappaB kinase and IkappaBalpha reveal NF-kappaB-dependent as well as NF-kappaB-independent pathways of HAS1 activation. (PubMed id 16258173)1, 3 Stuhlmeier K.M. and Pollaschek C. (2005)
- The NF-kappaB inhibitor pyrrolidine dithiocarbamate blocks IL-1beta induced hyaluronan synthase 1 (HAS1) mRNA transcription, pointing at NF-kappaB dependence of the gene HAS1. (PubMed id 16723203)1, 3 Kao J.J. (2006)
- Hyaluronic acid synthase-1 expression regulates bladder cancer growth, invasion, and angiogenesis through CD44. (PubMed id 18199543)1, 3 Golshani R....Lokeshwar V.B. (2008)
- Involvement of hyaluronan in regulation of fibroblast phenotype. (PubMed id 17611197)1, 3 Meran S....Steadman R. (2007)
|
Search for HAS1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing HAS1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing HAS1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing HAS1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for HAS1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for HAS1:

 | |
 | | | | |
|
 |  |  |
| | | | Search Tocris compounds for HAS1 |
|
 |
 | | | |
GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
|