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Aliases for HAR1B Gene

Subcategory (RNA class) for HAR1B Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for HAR1B Gene

  • Highly Accelerated Region 1B (Non-Protein Coding) 2 3
  • Highly Accelerated Region 1B (Non-Protein-Coding RNA) 2 3
  • Long Intergenic Non-Protein Coding RNA 65 2 3
  • Human Accelerated Region 1, Reverse 3
  • Human Accelerated Region 1 2
  • Non-Protein Coding RNA 65 2
  • NCRNA00065 3
  • LINC00065 3
  • Reverse 2
  • HAR1R 3

External Ids for HAR1B Gene

Previous GeneCards Identifiers for HAR1B Gene

  • GC20U900287
  • GC20M061197
  • GC20M061726
  • GC20M058445

Summaries for HAR1B Gene

GeneCards Summary for HAR1B Gene

HAR1B (Highly Accelerated Region 1B (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HAR1B Gene

Genomics for HAR1B Gene

Regulatory Elements for HAR1B Gene

Genomic Location for HAR1B Gene

63,095,493 bp from pter
63,102,319 bp from pter
6,827 bases
Minus strand

Genomic View for HAR1B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HAR1B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HAR1B Gene

Proteins for HAR1B Gene

Post-translational modifications for HAR1B Gene

No Post-translational modifications

No data available for DME Specific Peptides for HAR1B Gene

Domains & Families for HAR1B Gene

Gene Families for HAR1B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HAR1B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HAR1B Gene

Function for HAR1B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HAR1B Gene

Localization for HAR1B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HAR1B Gene

Pathways & Interactions for HAR1B Gene

SuperPathways for HAR1B Gene

No Data Available

Interacting Proteins for HAR1B Gene

Gene Ontology (GO) - Biological Process for HAR1B Gene


No data available for Pathways by source and SIGNOR curated interactions for HAR1B Gene

Drugs & Compounds for HAR1B Gene

No Compound Related Data Available

Transcripts for HAR1B Gene

mRNA/cDNA for HAR1B Gene

(3) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HAR1B Gene

Highly accelerated region 1B (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HAR1B Gene

No ASD Table

Relevant External Links for HAR1B Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HAR1B Gene

mRNA expression in normal human tissues for HAR1B Gene

mRNA differential expression in normal tissues according to GTEx for HAR1B Gene

This gene is overexpressed in Testis (x5.3), Brain - Nucleus accumbens (basal ganglia) (x4.9), Brain - Cortex (x4.8), Brain - Frontal Cortex (BA9) (x4.2), Brain - Putamen (basal ganglia) (x4.0), and Brain - Anterior cingulate cortex (BA24) (x4.0).

SOURCE GeneReport for Unigene cluster for HAR1B Gene Hs.635159

genes like me logo Genes that share expression patterns with HAR1B: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for HAR1B Gene

Orthologs for HAR1B Gene

Evolution for HAR1B Gene

Gene Tree for HAR1B (if available)
Gene Tree for HAR1B (if available)

No data available for Orthologs for HAR1B Gene

Paralogs for HAR1B Gene

No data available for Paralogs for HAR1B Gene

Variants for HAR1B Gene

Sequence variations from dbSNP and Humsavar for HAR1B Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs2427494 -- 63,097,157(+) GGGAA(C/G)CCCAA intron-variant
rs3810461 -- 63,097,499(+) CGGAA(A/C/T)GTCGA intron-variant
rs3810462 -- 63,097,674(+) GCGGG(G/T)CCGGC intron-variant
rs4809276 -- 63,097,846(+) TGAAG(A/G)CCAGG intron-variant
rs6010842 -- 63,097,554(+) TCCCC(A/C)ACACG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for HAR1B Gene

Variant ID Type Subtype PubMed ID
nsv913073 CNV Loss 21882294
nsv9825 CNV Gain 18304495
dgv4618n71 CNV Loss 21882294
dgv4623n71 CNV Loss 21882294
nsv834028 CNV Loss 17160897
dgv4625n71 CNV Loss 21882294
nsv913160 CNV Loss 21882294
nsv913161 CNV Loss 21882294
nsv509783 CNV Insertion 20534489
nsv913162 CNV Loss 21882294
dgv68n68 CNV Loss 17160897
nsv913163 CNV Loss 21882294
nsv3444 CNV Insertion 18451855
esv1000562 CNV Insertion 20482838
nsv513560 CNV Insertion 21212237
esv2537683 CNV Loss 19546169

Relevant External Links for HAR1B Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HAR1B Gene

Disorders for HAR1B Gene

Relevant External Links for HAR1B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with HAR1B: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HAR1B Gene

Publications for HAR1B Gene

  1. An RNA gene expressed during cortical development evolved rapidly in humans. (PMID: 16915236) Pollard K.S. … Haussler D. (Nature 2006) 2 67
  2. lncRNAdb: a reference database for long noncoding RNAs. (PMID: 21112873) Amaral P.P. … Mattick J.S. (Nucleic Acids Res. 2011) 67

Products for HAR1B Gene

Sources for HAR1B Gene

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