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HAGHL Gene

protein-coding GIFtS: 46

GC16P000717

hydroxyacylglutathione hydrolase-like
(Previous name: hydroxyacyl glutathione hydrolase-like )
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database

(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc , and/or ⁷Ensembl, ⁸miRBase)
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Aliases
EC 3.1.2.- ^³
MGC2605 ^¹, ²

Descriptions
GLO2-like/ RJD12 ^²
hydroxyacyl glutathione hydrolase-like ^¹
hydroxyacylglutathione hydrolase-like ^²

External Ids
HGNC: 14177¹
Entrez Gene: 84264²
UniProtKB: Q6PII5³
Ensembl: ENSG00000103253⁷

Search outside databases for aliases for HAGHL gene

Previous GC identifers: GC16U990171 GC16P000716

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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UniProtKB/Swiss-Prot: HAGHL_HUMAN, Q6PII5

Function: Hydrolase acting on ester bonds (Potential)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
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Genomic View:

UCSC Golden Path with GeneCards custom track

Transcription factor binding sites upstream to the HAGHL gene

Entrez Gene cytogenetic band: 16p13.3 Ensembl cytogenetic band: 16p13.3 HGNC cytogenetic band: 16p13.3

HAGHL Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 16 GeneLoc Exon Structure

GeneLoc location for GC16P000717: (about GC identifiers)

Start:	716,959 bp from pter
End:	737,296 bp from pter
Size:	20,338 bases
Orientation:	plus strand

RefSeq DNA sequence:

NC_000016.8 NT_037887.4

(According to ¹UniProtKB, and/or Ensembl, Phosphorylation sites according to ²Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
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UniProtKB/Swiss-Prot: HAGHL_HUMAN, Q6PII5 (See protein sequence)

Recommended Name: Hydroxyacylglutathione hydrolase-like protein

Size: 290 amino acids; 31557 Da

Cofactor: Binds 2 zinc ions per subunit (By similarity)

Sequence caution: Sequence=AAK61250.1; Type=Erroneous gene model prediction; Sequence=BAD92568.1;

Type=Erroneous initiation; Note=Translation N-terminally shortened; Sequence=BAD92568.1;

Type=Miscellaneous discrepancy; Note=Sequence of unknown origin at the C-terminus;

Secondary accessions: A6NCC4 Q59FX8 Q96BZ3 Q96NR5 Q96S11 Q9BT45

Alternative splicing: 4 isoforms: Q6PII5-1 Q6PII5-2 Q6PII5-3 Q6PII5-4

REFSEQ proteins (2 alternative transcripts):

NP_115680.1 NP_996995.1

ENSEMBL proteins:

ENSP00000341952 ENSP00000374350 ENSP00000374352 ENSP00000374351 ENSP00000374353

Human Recombinant Proteins

	Browse Drug Discovery Central at Invitrogen for human recombinant proteins
	Browse Purified and Recombinant Proteins at Millipore
	Browse Human Recombinant Proteins at Sigma-Aldrich
	Browse R&D Systems for human recombinant proteins
	Browse recombinant and purified proteins available from Enzo Life Sciences
	Browse Abcam for Recombinant Proteins
	Human Recombinant Proteins from Abnova (HAGHL)

OriGene Purified Recombinant Human Protein: HAGHL

Antibodies for HAGHL:

	Browse Antibodies Central at Invitrogen
	Browse Millipore's Extensive Line of Mono- and Polyclonal Antibodies
	Browse Antibodies at Sigma-Aldrich
	Browse R&D Systems for Antibodies
	Search for antibodies at Abcam and the World's Antibody Gateway (free search engine of over 150 antibody companies)
	Browse Abnova for Monoclonal and Polyclonal Antibodies
	Search Novus for antibodies for HAGHL

Assays for HAGHL:

	Browse Invitrogen for biochemical assays
	Browse Kits and Assays available from Millipore
	Browse R&D Systems for biochemical assays
	Browse biochemical assays available from Enzo Life Sciences

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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Graphical View of Domain Structure for InterPro Entry Q6PII5

ProtoNet protein and cluster: Q6PII5

UniProtKB/Swiss-Prot: HAGHL_HUMAN, Q6PII5

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family

(According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
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Inhib. RNA:		Invitrogen RNAi Products for gene knock-down (HAGHL)
		Browse for Gene Knock-down Tools from Millipore
		Browse Abnova for Chimera RNAi Products

OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_032304

Applied Biosystems Silencer® siRNAs for HAGHL

Sigma-Aldrich siRNA for HAGHL

Sigma-Aldrich shRNA for HAGHL

Explore Sigma-Aldrich super-pooled esiRNAs

Clones:		Invitrogen Clones for HAGHL
		Browse Clones for the Expression of Recombinant Proteins Available from Millipore

OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_032304
Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_032304
untagged cDNA clones in CMV expression vector (see all 2): NM_032304

Primers:

Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers

OriGene genome-wide validated SYBR primer pairs: NM_207112

UniProtKB/Swiss-Prot: HAGHL_HUMAN, Q6PII5

Function: Hydrolase acting on ester bonds (Potential)

Enzyme Number (IUBMB): EC 3.1.2.-

3 Gene Ontology (GO) molecular function terms (links to tree view):

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0008270	zinc ion binding	IEA	--
GO:0016787	hydrolase activity	IEA	--
GO:0046872	metal ion binding	IEA	--

About this table

(Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to ¹UniProtKB, ²MINT, and/or ³STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
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1 Sigma-Aldrich "Your Favorite Gene" Pathway for HAGHL (Your Favorite Gene powered by Ingenuity)

Pyruvate Metabolism

GeneDecks HAGHL for the pathways selected above

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3 Interacting proteins for HAGHL (ENSP00000341952³) via UniProtKB, MINT, and/or STRING

Interactant		Interaction Details
GeneCard	External ID(s)	Interaction Details
GLO1	ENSP00000362463³	STRING (score=.907)
LDHD	ENSP00000300051³	STRING (score=.899)
HAGH	ENSP00000262303³	STRING (score=.806)

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(Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
About This Section

Browse drugs & compounds from Enzo Life Sciences

Browse Small Molecules at Sigma-Aldrich

Browse Tocris compounds for HAGHL

(GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView,
non coding RNAs according to RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from Invitrogen, Millipore, and/or Abnova,
siRNAs from Applied Biosystems, Sigma-Aldrich,
shRNA from Sigma-Aldrich, OriGene,
Tagged/untagged cDNA clones from OriGene,
Expression Assays from Applied Biosystems)
About This Section

Inhib. RNA:		Invitrogen RNAi Products for gene knock-down (HAGHL)
		Browse for Gene Knock-down Tools from Millipore
		Browse Abnova for Chimera RNAi Products

OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_032304

Sigma-Aldrich siRNA for HAGHL

Sigma-Aldrich shRNA for HAGHL

Explore Sigma-Aldrich super-pooled esiRNAs

Applied Biosystems Silencer® siRNAs:

NM_032304 NM_207112

REFSEQ mRNAs for HAGHL gene (2 alternative transcripts):

NM_032304.2 NM_207112.1

Applied Biosystems TaqMan ® Gene Expression Assays:

NM_032304 NM_207112

               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_032304
                                 Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_032304
                                 untagged cDNA clones in CMV expression vector (see all 2): NM_032304

Additional cDNA sequence:

AB209331.1 AK054841.1 AK098340.1 AK293575.1 BC004353.1 BC015008.1 BC033796.1 BC036747.1

CR592523.1

16 DOTS entries:

DT.99987369 DT.205126 DT.99974411 DT.120675895 DT.95273770 DT.100026222 DT.95273768 DT.95273771

DT.97772481 DT.100646063 DT.100670842 DT.120675941 DT.120675967 DT.97844130 DT.40131883 DT.95371160

24/94 AceView cDNA sequences (see all 94 ):

AK054841 BM745715 BC004353 AW136334 BC015008 BI333301 CR592523 NM_207112

AW006136 BG821643 NM_032304 CN478667 BX090134 BQ054515 BU557856 BM716896

BG395061 AK098340 BC033796 BU177745 BC036747 BM754136 BG329582 AW002247

highest scoring ESTs for HAGHL:

AI953838 AA489499 AA531031 AA648930 AA845556 AI347578 AI612996 AI630826 AI660354 AI675370

Unigene Cluster for HAGHL:

Hydroxyacylglutathione hydrolase-like

Hs.124015 [show with all ESTs]

Unigene Representative Sequence: AK098340

GeneLoc Exon Structure

5/11 Alternative Splicing Database (ASD) splice patterns (SP) for HAGHL (see all 11 )

ExUns:	1a	·	1b	·	1c	^	2a	·	2b	·	2c	·	2d	·	2e	·	2f	^	3a	·	3b	^	4a	·	4b	·	4c	^	5a	·	5b	^	6a	·	6b	·	6c	^	7a	·	7b	·	7c	^	8	^	9a	·	9b	·	9c	·
SP1:																	-		-								-																-
SP2:					-		-		-		-		-				-		-								-
SP3:																	-		-																								-
SP4:							-		-		-		-				-		-
SP5:																																									-		-

ExUns:	9d
SP1:
SP2:
SP3:
SP4:
SP5:

About this scheme

ECgene alternative splicing isoforms for HAGHL

5 Ensembl transcripts including schematic representations:

ENST00000341413 ENST00000389700 ENST00000389702 ENST00000389701 ENST00000389703

(Experimental results according to ¹GeneNote and GNF BioGPS,
probe sets-to-genes annotations according to ²GeneAnnot , ³GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
Expression Assays from Applied Biosystems )
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HAGHL expression in normal and diseased human tissues

Applied Biosystems TaqMan ® Gene Expression Assays for HAGHL

¹ / ² / ³

3 probe-sets matching HAGHL gene

Affymetrix probe-set	Array	# genes	Sensitivity	Specificity	Correlation	Length	Gb_Accession	Consensus	Uniqueness	Score	Rank
Affymetrix probe-set	Array	GeneAnnot data			GeneNote data		GeneTide data
59471_at²^{, 3}	U95-C	1	1.00	1.00	1.00	1.00	AI953838	1.00	1.00	1.00	1
223485_at²^{, 3}	U133-B	1	1.00	1.00	--	--	BC004353	0.80	1.00	0.91	1
223485_at²	U133Plus2	1	1.00	1.00	--	--	--	--	--	--	--

GeneDecks HAGHL for binary patterns associated with the probe-sets selected above

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About this table

Data from

(Publications) and GNF BioGPS
About these images
About these images

CGAP SAGE TAG: AGGGCCACCT

SOURCE GeneReport for Unigene cluster: Hs.124015

(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD and/or ⁵MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
About This Section

Orthologs for HAGHL gene from 4 species

Organism	Gene	Locus	Description	Human Similarity	NCBI accessions
dog (Canis familiaris)	HAGHL¹	--	hydroxyacylglutathione hydrolase-like	89.01(n) 88.77(a)	490087 XM_547208.2 XP_547208.2
chimpanzee (Pan troglodytes)	HAGHL¹	--	hydroxyacylglutathione hydrolase-like	87.12(n) 83.39(a)	745423 XM_001158165.1 XP_001158165.1
mouse (Mus musculus)	Haghl^{1, 5}	17⁵	hydroxyacylglutathione hydrolase-like^{1, 5}	80.99(n)¹ 82.67(a)¹	68977¹ NM_026897.2¹ NP_081173.1¹ AI844861⁵ AK005274⁵ (see all 15)
chicken (Gallus gallus)	HAGHL¹	--	hydroxyacylglutathione hydrolase-like	71.52(n) 67.27(a)	416536 NM_001030637.1 NP_001025808.1

About this table Species with no ortholog for HAGHL

ENSEMBL Gene Tree for HAGHL

(Paralogs according to ¹HomoloGene
and ²Ensembl, Pseudogenes according to ³Pseudogene.org)
About This Section

Paralogs for HAGHL gene

ETHE1² PNKD² HAGH²

(According to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
About This Section

2 NCBI SNPs in HAGHL are shown
(Click for Applied Biosystems TaqMan ® Genotyping Assay) (only AB snps)

AB	SNP ID	Valid	Chr 16 pos	Sequence	Recs	AA Chg	Type	More	Recs	Allele freq	Pop	Total sample	More
AB	Genomic Data				Transcription Data				Allele Frequencies
				--	--	--		--	--				--
	rs12448432^1,2	A,C,F,H	718821(+)	`CACACA/GCTTAG`	2	T/T	syn¹ ese³		8		EU EA WA	840
--	rs60982207^1,2	--	718774(+)	`GCGCTC/TACCGA`	2	--	int¹		0	--	--	--	--

About this table
The following additional 49 SNP(s) have been found in Applied Biosystems data source:

(Click for Applied Biosystems TaqMan ® Genotyping Assay)

rs28481409	rs61750931	rs35146947	rs12443803	rs9928077	rs11860108	rs35987447
rs34851515	rs1406813	rs35973754	rs9932304	rs1063109	rs61998209	rs35368570
rs61998220	rs11867009	rs12448210	rs7205337	rs8045850	rs1054788	rs12444733
rs11864516	rs8047954	rs3809670	rs12599130	rs11862809	rs12446058	rs8055909
rs1406814	rs62032517	rs3752555	rs2020292	rs2071950	rs3829492	rs12597195
rs10794640	rs12597563	rs55956436	rs3743915	rs4589552	rs12449156	rs11248947
rs2071951	rs1406815	rs2071952	rs3169403	rs763206	rs7188554	rs61910708

HapMap Linkage Disequilibrium images for HAGHL (up to first 250kb)

(in which this Gene is Involved, According to OMIM, UniProtKB, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
About This Section

(Possibly Related Articles in Doctor's Guide)
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(in PubMed. Associations of this gene to articles via ¹Novoseek, ²HGNC, ³Entrez Gene, ⁴UniProtKB/Swiss-Prot, ⁵UniProtKB/TrEMBL, ⁶GAD, and/or ⁷PharmGKB)
About This Section

5 PubMed articles for HAGHL gene:

Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)^{3, 4} Ota T....Sugano S. (2004)
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)^{2, 3} Strausberg R.L....Marra M.A. (2002)
Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16. (PubMed id 11157797)^{3, 4} Daniels R.J....Higgs D.R. (2001)
The sequence and analysis of duplication-rich human chromosome 16. (PubMed id 15616553)⁴ Martin J.... Pennacchio L.A. (2004)
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)⁴ Gerhard D.S....Malek J. (2004)

(in PubMed, OMIM, and NCBI Bookshelf)
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		AND	OR
Aliases
Free Text

Query String		PubMed OMIM NCBI Bookshelf
	(Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
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Entrez Gene: 84264	HGNC: 14177	AceView: HAGHL	Ensembl:ENSG00000103253	euGenes: HUgn84264
ECgene: HAGHL	H-InvDB: HAGHL

(According to HUGE)
About This Section

(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
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Licensable Technologies for HAGHL
(Available from WIS Yeda, Salk, Tufts)

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(Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
Enzo Life Sciences, and/or Tocris Bioscience)
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Products for HAGHL:

TaqMan ® Gene Expression Assays

TaqMan ® Genotyping Assays

Free SNP selection tool

Invitrogen iPath Pathways	Invitrogen BLOCK-iT™ RNAi
Invitrogen Antibodies	Invitrogen Assays
Invitrogen Clones	Invitrogen Q-PCR Products
Invitrogen Human Recombinant Kinases	Invitrogen Custom Antibody and Peptide Service
Invitrogen Proteins / Assays / Screening Services	Search Invitrogen catalog for HAGHL-related products

	Millipore Custom Antibody & Bulk Services
	Millipore Preclinical / Clinical Development Services
	Millipore Immunoassay Services
	Millipore Target Screening & Profiling Services

	Predesigned and custom siRNAs for HAGHL		Browse antibodies at Sigma-Aldrich
	Explore super-pooled esiRNAs		Browse proteins at Sigma-Aldrich
	Lentivirus-delivered shRNAs for HAGHL		Browse small molecules at Sigma-Aldrich
	"Your Favorite Gene" Pathways		feedback

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	Cell Culture Products		ELISAs
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	Multiplex/Array Assay Kits & Reagents		ELISpot Kits & Development Modules
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HAGHL Gene

protein-coding GIFtS: 46

Aliases &
Descriptions
for HAGHL

Summaries
for HAGHL

Genomic Location
for HAGHL

Proteins
for HAGHL

Protein Domains/
Families
for HAGHL

Gene Function
for HAGHL

Pathways & Interactions
for HAGHL

Drugs & Compounds
for HAGHL

Transcripts
for HAGHL

Expression
for HAGHL

Orthologs
for HAGHL

Paralogs
for HAGHL

SNPs/Variants
for HAGHL

Disorders & Mutations
for HAGHL

Medical News
for HAGHL

Publications
for HAGHL

Search for HAGHL

Genome Databases showing HAGHL

Other Databases showing HAGHL

Specialized Databases showing HAGHL

Licensable Technologies
for HAGHL

Services
for HAGHL

Gene Index: 3 5 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

HAGHL Gene

protein-coding GIFtS: 46

Aliases & Descriptionsfor HAGHL

Summariesfor HAGHL

Genomic Locationfor HAGHL

Proteinsfor HAGHL

Protein Domains/Familiesfor HAGHL

Gene Functionfor HAGHL

Pathways & Interactionsfor HAGHL

Drugs & Compoundsfor HAGHL

Transcriptsfor HAGHL

Expression for HAGHL

Orthologsfor HAGHL

Paralogsfor HAGHL

SNPs/Variantsfor HAGHL

Disorders & Mutationsfor HAGHL

Medical Newsfor HAGHL

Publicationsfor HAGHL

Search for HAGHL

Genome Databases showing HAGHL

Other Databases showing HAGHL

Specialized Databases showing HAGHL

Licensable Technologiesfor HAGHL

Servicesfor HAGHL

Gene Index: 3 5 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Aliases &
Descriptions
for HAGHL

Summaries
for HAGHL

Genomic Location
for HAGHL

Proteins
for HAGHL

Protein Domains/
Families
for HAGHL

Gene Function
for HAGHL

Pathways & Interactions
for HAGHL

Drugs & Compounds
for HAGHL

Transcripts
for HAGHL

Expression
for HAGHL

Orthologs
for HAGHL

Paralogs
for HAGHL

SNPs/Variants
for HAGHL

Disorders & Mutations
for HAGHL

Medical News
for HAGHL

Publications
for HAGHL

Licensable Technologies
for HAGHL

Services
for HAGHL