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HADHAP1 Gene(Pseudogene)

Hydroxyacyl-CoA Dehydrogenase/3-Ketoacyl-CoA Thiolase/Enoyl-CoA Hydratase (Trifunctional Protein), Alpha Subunit Pseudogene 1

GCID:
GC04M165403
GIFtS:
11

Aliases for HADHAP1 Gene

Aliases for HADHAP1 Gene

  • Hydroxyacyl-CoA Dehydrogenase/3-Ketoacyl-CoA Thiolase/Enoyl-CoA Hydratase (Trifunctional Protein), Alpha Subunit Pseudogene 1 2 3 5
  • Hydroxyacyl-Coenzyme A Dehydrogenase/3-Ketoacyl-Coenzyme A Thiolase/Enoyl-Coenzyme A Hydratase Pseudogene (Gastrin Binding Protein Pseudogene) 2 3
  • Hydroxyacyl-CoA Dehydrogenase/3-Ketoacyl-CoA Thiolase/Enoyl-CoA Hydratase Pseudogene (Gastrin Binding Protein Pseudogene) 2 3
  • Hydroxyacyl-Coenzyme A Dehydrogenase/3-Ketoacyl-Coenzyme A Thiolase/Enoyl-Coenzyme A Hydratase (Trifunctional Protein), Alpha Subunit Pseudogene 3
  • Gastrin Binding Protein Pseudogene 3
  • HADHAP 3

External Ids for HADHAP1 Gene

Previous HGNC Symbols for HADHAP1 Gene

  • HADHAP

Previous GeneCards Identifiers for HADHAP1 Gene

  • GC04M166324
  • GC04M162076

Summaries for HADHAP1 Gene

GeneCards Summary for HADHAP1 Gene

HADHAP1 (Hydroxyacyl-CoA Dehydrogenase/3-Ketoacyl-CoA Thiolase/Enoyl-CoA Hydratase (Trifunctional Protein), Alpha Subunit Pseudogene 1) is a Pseudogene.

Additional gene information for HADHAP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HADHAP1 Gene

Genomics for HADHAP1 Gene

Regulatory Elements for HADHAP1 Gene

Enhancers for HADHAP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H165439 1.5 FANTOM5 Ensembl ENCODE 7 -34.0 -33999 1 PKNOX1 FEZF1 ZNF2 FOS SP3 TSHZ1 ZNF518A GLIS1 STAT3 WT1 MIR578 HADHAP1 CPE FAM218A GC04M165414 GC04P165491
GH04H165410 0.3 FANTOM5 0.7 -4.0 -3962 0 MSMO1 CPE FAM218A HADHAP1 GC04M165414
GH04H165398 0.5 FANTOM5 0.4 +8.1 8144 0 MXI1 RFX1 CPE HADHAP1 MIR578
GH04H165394 0.4 FANTOM5 0.4 +11.7 11716 0 GTF3C2 MIR578 HADHAP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HADHAP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HADHAP1 Gene

Chromosome:
4
Start:
165,403,687 bp from pter
End:
165,406,384 bp from pter
Size:
2,698 bases
Orientation:
Minus strand

Genomic View for HADHAP1 Gene

Genes around HADHAP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HADHAP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HADHAP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HADHAP1 Gene

Proteins for HADHAP1 Gene

Post-translational modifications for HADHAP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HADHAP1 Gene

Domains & Families for HADHAP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HADHAP1 Gene

Function for HADHAP1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HADHAP1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HADHAP1 Gene

Localization for HADHAP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HADHAP1 Gene

Pathways & Interactions for HADHAP1 Gene

SuperPathways for HADHAP1 Gene

No Data Available

Interacting Proteins for HADHAP1 Gene

Gene Ontology (GO) - Biological Process for HADHAP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HADHAP1 Gene

Drugs & Compounds for HADHAP1 Gene

No Compound Related Data Available

Transcripts for HADHAP1 Gene

mRNA/cDNA for HADHAP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HADHAP1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for HADHAP1 Gene

No ASD Table

Relevant External Links for HADHAP1 Gene

GeneLoc Exon Structure for
HADHAP1
ECgene alternative splicing isoforms for
HADHAP1

Expression for HADHAP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HADHAP1 Gene

mRNA differential expression in normal tissues according to GTEx for HADHAP1 Gene

This gene is overexpressed in Prostate (x16.0) and Pituitary (x9.1).

NURSA nuclear receptor signaling pathways regulating expression of HADHAP1 Gene:

HADHAP1
genes like me logo Genes that share expression patterns with HADHAP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HADHAP1 Gene

Orthologs for HADHAP1 Gene

Evolution for HADHAP1 Gene

ENSEMBL:
Gene Tree for HADHAP1 (if available)
TreeFam:
Gene Tree for HADHAP1 (if available)

No data available for Orthologs for HADHAP1 Gene

Paralogs for HADHAP1 Gene

No data available for Paralogs for HADHAP1 Gene

Variants for HADHAP1 Gene

Relevant External Links for HADHAP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HADHAP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HADHAP1 Gene

Disorders for HADHAP1 Gene

Relevant External Links for HADHAP1

Genetic Association Database (GAD)
HADHAP1

No disorders were found for HADHAP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HADHAP1 Gene

Publications for HADHAP1 Gene

  1. Structures of the human cDNA and gene encoding the 78 kDa gastrin-binding protein and of a related pseudogene. (PMID: 7918661) Zhang QX … Baldwin GS (Biochimica et biophysica acta 1994) 2 3 60
  2. Characterization and peripheral blood biomarker assessment of anti-Jo-1 antibody-positive interstitial lung disease. (PMID: 19565490) Richards TJ … Ascherman DP (Arthritis and rheumatism 2009) 3 60
  3. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 45 60
  4. Genetic correlates of longevity and selected age-related phenotypes: a genome-wide association study in the Framingham Study. (PMID: 17903295) Lunetta KL … Murabito JM (BMC medical genetics 2007) 45 60

Products for HADHAP1 Gene

Sources for HADHAP1 Gene

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