Free for academic non-profit institutions. Other users need a Commercial license

H3F3BP1 Gene(Pseudogene)

H3 Histone, Family 3B Pseudogene 1

GCID:
GC13P071675
GIFtS:
9
Genes Participants
UDN Logo

Aliases for H3F3BP1 Gene

Aliases for H3F3BP1 Gene

  • H3 Histone, Family 3B Pseudogene 1 2 3 5
  • H3 Histone, Family 3B (H3.3B) Pseudogene 1 2 3
  • P46 3

External Ids for H3F3BP1 Gene

Previous GeneCards Identifiers for H3F3BP1 Gene

  • GC13P072251

Summaries for H3F3BP1 Gene

GeneCards Summary for H3F3BP1 Gene

H3F3BP1 (H3 Histone, Family 3B Pseudogene 1) is a Pseudogene.

Additional gene information for H3F3BP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for H3F3BP1 Gene

Genomics for H3F3BP1 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for H3F3BP1 Gene

Promoters and enhancers for H3F3BP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH13I071681 Enhancer 0.7 VISTA UCNEbase 0.4 +7.2 7239 1.2 ZNF274 H3F3BP1 RPL21P109 DACH1
GH13I071659 Enhancer 0.7 UCNEbase 0.4 -15.5 -15474 0.2 OSR2 CTBP1 PRDM6 MZF1 ZNF384 FEZF1 GC13P071643 H3F3BP1 DACH1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around H3F3BP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for H3F3BP1 Gene

Genomic Locations for H3F3BP1 Gene
chr13:71,675,067-71,675,471
(GRCh38/hg38)
Size:
405 bases
Orientation:
Plus strand
chr13:72,249,199-72,249,601
(GRCh37/hg19)

Genomic View for H3F3BP1 Gene

Genes around H3F3BP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
H3F3BP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for H3F3BP1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for H3F3BP1 Gene

Proteins for H3F3BP1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for H3F3BP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for H3F3BP1 Gene

Domains & Families for H3F3BP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for H3F3BP1 Gene

Function for H3F3BP1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for H3F3BP1 Gene

Localization for H3F3BP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for H3F3BP1 Gene

Pathways & Interactions for H3F3BP1 Gene

SuperPathways for H3F3BP1 Gene

PathCards logo More details on SuperPathways for H3F3BP1
No Data Available

Interacting Proteins for H3F3BP1 Gene

Gene Ontology (GO) - Biological Process for H3F3BP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for H3F3BP1 Gene

Drugs & Compounds for H3F3BP1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for H3F3BP1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for H3F3BP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for H3F3BP1 Gene

No ASD Table

Relevant External Links for H3F3BP1 Gene

GeneLoc Exon Structure for
H3F3BP1
ECgene alternative splicing isoforms for
H3F3BP1

Expression for H3F3BP1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for H3F3BP1 Gene

mRNA expression in normal human tissues for H3F3BP1 Gene
mRNA expression by GTEx for H3F3BP1 Gene

mRNA differential expression in normal tissues according to GTEx for H3F3BP1 Gene

This gene is overexpressed in Whole Blood (x19.2).

NURSA nuclear receptor signaling pathways regulating expression of H3F3BP1 Gene:

H3F3BP1
genes like me logo Genes that share expression patterns with H3F3BP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for H3F3BP1 Gene

Orthologs for H3F3BP1 Gene

Evolution for H3F3BP1 Gene

ENSEMBL:
Gene Tree for H3F3BP1 (if available)
TreeFam:
Gene Tree for H3F3BP1 (if available)

No data available for Orthologs for H3F3BP1 Gene

Paralogs for H3F3BP1 Gene

No data available for Paralogs for H3F3BP1 Gene

Variants for H3F3BP1 Gene

Additional Variant Information for H3F3BP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
H3F3BP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for H3F3BP1 Gene

Disorders for H3F3BP1 Gene

No disorders were found for H3F3BP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for H3F3BP1 Gene

Publications for H3F3BP1 Gene

  1. The human histone H3 complement anno 2011. (PMID: 21782046) Ederveen TH … Logie C (Biochimica et biophysica acta 2011) 2 3 58

Products for H3F3BP1 Gene

Sources for H3F3BP1 Gene

Content
Loading form....