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Aliases for H3F3AP6 Gene

Aliases for H3F3AP6 Gene

  • H3 Histone, Family 3A, Pseudogene 6 2 3 5
  • H3 Histone, Family 3A Pseudogene 3
  • H3 Histone Pseudogene 3
  • P21 3

External Ids for H3F3AP6 Gene

Previous GeneCards Identifiers for H3F3AP6 Gene

  • GC04M140620

Summaries for H3F3AP6 Gene

GeneCards Summary for H3F3AP6 Gene

H3F3AP6 (H3 Histone, Family 3A, Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for H3F3AP6 Gene

Genomics for H3F3AP6 Gene

Regulatory Elements for H3F3AP6 Gene

Enhancers for H3F3AP6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04G139081 1.6 FANTOM5 ENCODE 5.9 +614.9 614889 4.4 CREB3L1 ZFP64 DMAP1 FEZF1 YY1 ZNF143 ZNF548 SP3 NFYC TBX21 ELF2 NAA15 NOCT LOC105377448 MGARP RAB33B H3F3AP6 GC04P139099 RNU6-531P
GH04G139312 1.7 FANTOM5 Ensembl ENCODE dbSUPER 4.4 +383.8 383809 4.8 HDAC1 PKNOX1 NFIB RAD21 YY1 ZNF335 FOS IKZF2 CREM ZNF263 NDUFC1 MGARP RAB33B H3F3AP6 ELF2 GC04P139319
GH04G139451 1.1 ENCODE 4.5 +244.4 244374 5.0 HNRNPUL1 HDGF PKNOX1 CREB3L1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 RAB33B NDUFC1 MAML3 MGARP H3F3AP6 LOC101927451 GC04P139503
GH04G139460 0.6 ENCODE 4.5 +237.6 237559 1.0 RAD51 USF1 TEAD4 MAX NFYC USF2 CHD7 RAB33B H3F3AP6 LOC101927451 GC04P139503
GH04G139357 0.5 FANTOM5 4.5 +340.6 340612 0.4 KDM1A ZNF623 MGARP H3F3AP6 GC04P139370 RNU6-1214P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around H3F3AP6 on UCSC Golden Path with GeneCards custom track

Genomic Location for H3F3AP6 Gene

Chromosome:
4
Start:
139,697,626 bp from pter
End:
139,698,635 bp from pter
Size:
1,010 bases
Orientation:
Minus strand

Genomic View for H3F3AP6 Gene

Genes around H3F3AP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
H3F3AP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for H3F3AP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for H3F3AP6 Gene

Proteins for H3F3AP6 Gene

Post-translational modifications for H3F3AP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for H3F3AP6 Gene

Domains & Families for H3F3AP6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for H3F3AP6 Gene

Function for H3F3AP6 Gene

Animal Model Products

miRNA for H3F3AP6 Gene

miRTarBase miRNAs that target H3F3AP6

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for H3F3AP6 Gene

Localization for H3F3AP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for H3F3AP6 Gene

Pathways & Interactions for H3F3AP6 Gene

SuperPathways for H3F3AP6 Gene

No Data Available

Interacting Proteins for H3F3AP6 Gene

Gene Ontology (GO) - Biological Process for H3F3AP6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for H3F3AP6 Gene

Drugs & Compounds for H3F3AP6 Gene

No Compound Related Data Available

Transcripts for H3F3AP6 Gene

mRNA/cDNA for H3F3AP6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for H3F3AP6 Gene

No ASD Table

Relevant External Links for H3F3AP6 Gene

GeneLoc Exon Structure for
H3F3AP6
ECgene alternative splicing isoforms for
H3F3AP6

Expression for H3F3AP6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for H3F3AP6 Gene

mRNA differential expression in normal tissues according to GTEx for H3F3AP6 Gene

This gene is overexpressed in Whole Blood (x15.5).

NURSA nuclear receptor signaling pathways regulating expression of H3F3AP6 Gene:

H3F3AP6
genes like me logo Genes that share expression patterns with H3F3AP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for H3F3AP6 Gene

Orthologs for H3F3AP6 Gene

Evolution for H3F3AP6 Gene

ENSEMBL:
Gene Tree for H3F3AP6 (if available)
TreeFam:
Gene Tree for H3F3AP6 (if available)

No data available for Orthologs for H3F3AP6 Gene

Paralogs for H3F3AP6 Gene

No data available for Paralogs for H3F3AP6 Gene

Variants for H3F3AP6 Gene

Relevant External Links for H3F3AP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
H3F3AP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for H3F3AP6 Gene

Disorders for H3F3AP6 Gene

No disorders were found for H3F3AP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for H3F3AP6 Gene

Publications for H3F3AP6 Gene

  1. The human histone H3 complement anno 2011. (PMID: 21782046) Ederveen T.H. … Logie C. (Biochim. Biophys. Acta 2011) 2 3 64
  2. Proteomic analysis of I+4I^1 integrin adhesion complexes reveals I+-subunit-dependent protein recruitment. (PMID: 22623428) Byron A. … Humphries M.J. (Proteomics 2012) 3 64
  3. Poly(ADP-ribosyl)ation directs recruitment and activation of an ATP-dependent chromatin remodeler. (PMID: 19666485) Gottschalk A.J. … Conaway R.C. (Proc. Natl. Acad. Sci. U.S.A. 2009) 3 64

Products for H3F3AP6 Gene

Sources for H3F3AP6 Gene

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