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Aliases for H3F3AP4 Gene

Aliases for H3F3AP4 Gene

  • H3 Histone, Family 3A, Pseudogene 4 2 3
  • H3 Histone, Family 3A Pseudogene 3
  • P13 3

External Ids for H3F3AP4 Gene

Previous GeneCards Identifiers for H3F3AP4 Gene

  • GC02P175586

Summaries for H3F3AP4 Gene

GeneCards Summary for H3F3AP4 Gene

H3F3AP4 (H3 Histone, Family 3A, Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for H3F3AP4 Gene

Genomics for H3F3AP4 Gene

Genomic Location for H3F3AP4 Gene

Chromosome:
2
Start:
174,719,800 bp from pter
End:
174,720,858 bp from pter
Size:
1,059 bases
Orientation:
Plus strand

Genomic View for H3F3AP4 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for H3F3AP4 Gene

No data available for Regulatory Elements for H3F3AP4 Gene

Proteins for H3F3AP4 Gene

Post-translational modifications for H3F3AP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for H3F3AP4 Gene

Domains & Families for H3F3AP4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for H3F3AP4 Gene

Function for H3F3AP4 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for H3F3AP4 Gene

Localization for H3F3AP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for H3F3AP4 Gene

Pathways & Interactions for H3F3AP4 Gene

SuperPathways for H3F3AP4 Gene

No Data Available

Interacting Proteins for H3F3AP4 Gene

Gene Ontology (GO) - Biological Process for H3F3AP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for H3F3AP4 Gene

Drugs & Compounds for H3F3AP4 Gene

No Compound Related Data Available

Transcripts for H3F3AP4 Gene

mRNA/cDNA for H3F3AP4 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for H3F3AP4 Gene

No ASD Table

Relevant External Links for H3F3AP4 Gene

GeneLoc Exon Structure for
H3F3AP4
ECgene alternative splicing isoforms for
H3F3AP4

Expression for H3F3AP4 Gene

mRNA expression in normal human tissues for H3F3AP4 Gene

mRNA differential expression in normal tissues according to GTEx for H3F3AP4 Gene

This gene is overexpressed in Whole Blood (x13.8).
genes like me logo Genes that share expression patterns with H3F3AP4: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for H3F3AP4 Gene

Orthologs for H3F3AP4 Gene

Evolution for H3F3AP4 Gene

ENSEMBL:
Gene Tree for H3F3AP4 (if available)
TreeFam:
Gene Tree for H3F3AP4 (if available)

No data available for Orthologs for H3F3AP4 Gene

Paralogs for H3F3AP4 Gene

No data available for Paralogs for H3F3AP4 Gene

Variants for H3F3AP4 Gene

Sequence variations from dbSNP and Humsavar for H3F3AP4 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs1349584 -- 174,721,224(-) GCAGC(A/G)TGGGA downstream-variant-500B
rs1463262 -- 174,719,434(-) GTGAG(A/C)CTCAT upstream-variant-2KB
rs1463263 -- 174,719,429(-) ACTCA(G/T)CTAAC upstream-variant-2KB
rs2600701 -- 174,719,993(-) GCGCA(C/G)TCTTG nc-transcript-variant
rs2646195 -- 174,718,288(+) CTTCA(A/G)AAGCC upstream-variant-2KB

Relevant External Links for H3F3AP4 Gene

HapMap Linkage Disequilibrium report
H3F3AP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for H3F3AP4 Gene

Disorders for H3F3AP4 Gene

Relevant External Links for H3F3AP4

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
H3F3AP4
genes like me logo Genes that share disorders with H3F3AP4: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for H3F3AP4 Gene

Publications for H3F3AP4 Gene

  1. The human histone H3 complement anno 2011. (PMID: 21782046) Ederveen T.H. … Logie C. (Biochim. Biophys. Acta 2011) 2 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 67
  3. Unusual structure, evolutionary conservation of non-coding sequences and numerous pseudogenes characterize the human H3.3 histone multigene family. (PMID: 3031613) Wells D. … Kedes L. (Nucleic Acids Res. 1987) 67

Products for H3F3AP4 Gene

Sources for H3F3AP4 Gene

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