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Aliases for H3F3AP2 Gene

Subcategory (RNA class) for H3F3AP2 Gene

lncRNA

Aliases for H3F3AP2 Gene

  • H3 Histone Family Member 3A Pseudogene 2 2 3
  • H3 Histone, Family 3A, Pseudogene 2 2 3
  • AL049829.3 5
  • H3F3CP 3

External Ids for H3F3AP2 Gene

ORGUL Members for H3F3AP2 Gene

Previous GeneCards Identifiers for H3F3AP2 Gene

  • GC14U900594
  • GC14P022833
  • GC14P023763
  • GC14P003880
  • GC14P023391
  • GC14P023471
  • GC14P023646
  • GC14P023667
  • GC14P023865
  • GC14P023926
  • GC14P024035

Summaries for H3F3AP2 Gene

GeneCards Summary for H3F3AP2 Gene

H3F3AP2 (H3 Histone Family Member 3A Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for H3F3AP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for H3F3AP2 Gene

Genomics for H3F3AP2 Gene

GeneHancer (GH) Regulatory Elements for H3F3AP2 Gene

Promoters and enhancers for H3F3AP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I023294 Enhancer 1.2 Ensembl ENCODE 550.8 +1.2 1183 0.8 ATF1 FOXA2 ARNT SIN3A GLI4 ZNF2 TCF12 E2F8 ZNF143 KLF7 H3F3AP2 GC14M023298 PIR49238 PIR41206 HOMEZ
GH14I023295 Enhancer 0.4 ENCODE 550.8 +0.7 670 0.1 SP1 POLR2A POU5F1 H3F3AP2 HOMEZ PIR41206
GH14I022927 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.8 -364.2 -364245 3.2 CLOCK MLX DMAP1 IRF4 YY1 SLC30A9 ZNF213 ZNF143 ZNF548 SP3 PRMT5 TRR-ACG1-3 LOC101926933 HAUS4 NGDN ACIN1 RBM23 LOC102724814 PABPN1 SLC7A8
GH14I023528 Enhancer 0.4 dbSUPER 5.1 +234.7 234717 0.7 CTCF FOXA2 ZNF143 ZFHX2 H3F3AP2 ENSG00000273618 THTPA ZFHX2-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around H3F3AP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for H3F3AP2 Gene

Genomic Locations for H3F3AP2 Gene
chr14:23,293,852-23,295,800
(GRCh38/hg38)
Size:
1,949 bases
Orientation:
Plus strand
chr14:23,763,061-23,765,009
(GRCh37/hg19)

Genomic View for H3F3AP2 Gene

Genes around H3F3AP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
H3F3AP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for H3F3AP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for H3F3AP2 Gene

Proteins for H3F3AP2 Gene

Post-translational modifications for H3F3AP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for H3F3AP2 Gene

Domains & Families for H3F3AP2 Gene

Gene Families for H3F3AP2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with H3F3AP2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for H3F3AP2 Gene

Function for H3F3AP2 Gene

Phenotypes From GWAS Catalog for H3F3AP2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for H3F3AP2 Gene

Localization for H3F3AP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for H3F3AP2 Gene

Pathways & Interactions for H3F3AP2 Gene

SuperPathways for H3F3AP2 Gene

No Data Available

Interacting Proteins for H3F3AP2 Gene

Gene Ontology (GO) - Biological Process for H3F3AP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for H3F3AP2 Gene

Drugs & Compounds for H3F3AP2 Gene

No Compound Related Data Available

Transcripts for H3F3AP2 Gene

mRNA/cDNA for H3F3AP2 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for H3F3AP2 Gene

No ASD Table

Relevant External Links for H3F3AP2 Gene

GeneLoc Exon Structure for
H3F3AP2
ECgene alternative splicing isoforms for
H3F3AP2

Expression for H3F3AP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for H3F3AP2 Gene

mRNA differential expression in normal tissues according to GTEx for H3F3AP2 Gene

This gene is overexpressed in Brain - Cerebellum (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of H3F3AP2 Gene:

H3F3AP2
genes like me logo Genes that share expression patterns with H3F3AP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for H3F3AP2 Gene

Orthologs for H3F3AP2 Gene

Evolution for H3F3AP2 Gene

ENSEMBL:
Gene Tree for H3F3AP2 (if available)
TreeFam:
Gene Tree for H3F3AP2 (if available)

No data available for Orthologs for H3F3AP2 Gene

Paralogs for H3F3AP2 Gene

No data available for Paralogs for H3F3AP2 Gene

Variants for H3F3AP2 Gene

Additional Variant Information for H3F3AP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
H3F3AP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for H3F3AP2 Gene

Disorders for H3F3AP2 Gene

Additional Disease Information for H3F3AP2

No disorders were found for H3F3AP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for H3F3AP2 Gene

Publications for H3F3AP2 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for H3F3AP2 Gene

Sources for H3F3AP2 Gene

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