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Aliases for H3.Y Gene

Subcategory (RNA class) for H3.Y Gene

lncRNA

Aliases for H3.Y Gene

  • Histone Cluster 2, H3c Pseudogene 3
  • AC233724.13 5

External Ids for H3.Y Gene

ORGUL Members for H3.Y Gene

Previous GeneCards Identifiers for H3.Y Gene

  • GC05M017774
  • GC05M017783
  • GC05M017793
  • GC05M017802
  • GC05M017812
  • GC05M017822
  • GC05M017837
  • GC05M017851
  • GC05M017869
  • GC05M017883
  • GC05M017898
  • GC05M017915
  • GC05M017930
  • GC05M017947

Summaries for H3.Y Gene

GeneCards Summary for H3.Y Gene

H3.Y (Histone Cluster 2, H3c Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for H3.Y Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for H3.Y Gene

Genomics for H3.Y Gene

Genomic Location for H3.Y Gene

Chromosome:
5
Start:
17,655,126 bp from pter
End:
17,655,538 bp from pter
Size:
413 bases
Orientation:
Minus strand

Genomic View for H3.Y Gene

Genes around H3.Y on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
H3.Y Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for H3.Y Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for H3.Y Gene

No data available for Regulatory Elements for H3.Y Gene

Proteins for H3.Y Gene

Post-translational modifications for H3.Y Gene

No Post-translational modifications

No data available for DME Specific Peptides for H3.Y Gene

Domains & Families for H3.Y Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for H3.Y Gene

Function for H3.Y Gene

Phenotypes From GWAS Catalog for H3.Y Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for H3.Y Gene

Localization for H3.Y Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for H3.Y Gene

Pathways & Interactions for H3.Y Gene

No Data Available

Interacting Proteins for H3.Y Gene

Gene Ontology (GO) - Biological Process for H3.Y Gene

None

No data available for Pathways by source and SIGNOR curated interactions for H3.Y Gene

Drugs & Compounds for H3.Y Gene

No Compound Related Data Available

Transcripts for H3.Y Gene

mRNA/cDNA for H3.Y Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for H3.Y Gene

No ASD Table

Relevant External Links for H3.Y Gene

GeneLoc Exon Structure for
H3.Y

Expression for H3.Y Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for H3.Y Gene

genes like me logo Genes that share expression patterns with H3.Y: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for H3.Y Gene

Orthologs for H3.Y Gene

Evolution for H3.Y Gene

ENSEMBL:
Gene Tree for H3.Y (if available)
TreeFam:
Gene Tree for H3.Y (if available)

No data available for Orthologs for H3.Y Gene

Paralogs for H3.Y Gene

No data available for Paralogs for H3.Y Gene

Variants for H3.Y Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for H3.Y Gene

Disorders for H3.Y Gene

No disorders were found for H3.Y Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for H3.Y Gene

Publications for H3.Y Gene

  1. Structure and function of human histone H3.Y nucleosome. (PMID: 27016736) Kujirai T … Kurumizaka H (Nucleic acids research 2016) 3 60
  2. A comprehensive view of the epigenetic landscape part I: DNA methylation, passive and active DNA demethylation pathways and histone variants. (PMID: 25362550) Sadakierska-Chudy A … Filip M (Neurotoxicity research 2015) 3 60
  3. The double face of the histone variant H3.3. (PMID: 21263457) Szenker E … Almouzni G (Cell research 2011) 3 60
  4. Identification and characterization of two novel primate-specific histone H3 variants, H3.X and H3.Y. (PMID: 20819935) Wiedemann SM … Hake SB (The Journal of cell biology 2010) 3 60
  5. H3.Y discriminates between HIRA and DAXX chaperone complexes and reveals unexpected insights into human DAXX-H3.3-H4 binding and deposition requirements. (PMID: 28334823) Zink LM … Hake SB (Nucleic acids research 2017) 3

Products for H3.Y Gene

Sources for H3.Y Gene

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