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Aliases for H3.X Gene

Subcategory (RNA class) for H3.X Gene

lncRNA

Aliases for H3.X Gene

  • Histone Cluster 2, H3d Pseudogene 3

External Ids for H3.X Gene

ORGUL Members for H3.X Gene

Summaries for H3.X Gene

GeneCards Summary for H3.X Gene

H3.X (Histone Cluster 2, H3d Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for H3.X Gene

Genomics for H3.X Gene

Genomic Location for H3.X Gene

Chromosome:
5
Start:
17,491,361 bp from pter
End:
17,491,769 bp from pter
Size:
409 bases
Orientation:
Minus strand

Genomic View for H3.X Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for H3.X Gene

No data available for Regulatory Elements for H3.X Gene

Proteins for H3.X Gene

Post-translational modifications for H3.X Gene

No Post-translational modifications

No data available for DME Specific Peptides for H3.X Gene

Domains & Families for H3.X Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for H3.X Gene

Function for H3.X Gene

genes like me logo Genes that share phenotypes with H3.X: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for H3.X Gene

Localization for H3.X Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for H3.X Gene

Pathways & Interactions for H3.X Gene

SuperPathways for H3.X Gene

No Data Available

Interacting Proteins for H3.X Gene

Gene Ontology (GO) - Biological Process for H3.X Gene

None

No data available for Pathways by source and SIGNOR curated interactions for H3.X Gene

Drugs & Compounds for H3.X Gene

No Compound Related Data Available

Transcripts for H3.X Gene

mRNA/cDNA for H3.X Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for H3.X Gene

No ASD Table

Relevant External Links for H3.X Gene

GeneLoc Exon Structure for
H3.X

Expression for H3.X Gene

mRNA expression in normal human tissues for H3.X Gene

mRNA differential expression in normal tissues according to GTEx for H3.X Gene

This gene is overexpressed in Testis (x33.1) and Whole Blood (x12.9).
genes like me logo Genes that share expression patterns with H3.X: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for H3.X Gene

Orthologs for H3.X Gene

Evolution for H3.X Gene

ENSEMBL:
Gene Tree for H3.X (if available)
TreeFam:
Gene Tree for H3.X (if available)

No data available for Orthologs for H3.X Gene

Paralogs for H3.X Gene

No data available for Paralogs for H3.X Gene

Variants for H3.X Gene

Relevant External Links for H3.X Gene

HapMap Linkage Disequilibrium report
H3.X

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for H3.X Gene

Disorders for H3.X Gene

genes like me logo Genes that share disorders with H3.X: view

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for H3.X Gene

Publications for H3.X Gene

  1. A comprehensive view of the epigenetic landscape part I: DNA methylation, passive and active DNA demethylation pathways and histone variants. (PMID: 25362550) Sadakierska-Chudy A. … Filip M. (Neurotox Res 2015) 67
  2. The double face of the histone variant H3.3. (PMID: 21263457) Szenker E. … Almouzni G. (Cell Res. 2011) 67
  3. Identification and characterization of two novel primate-specific histone H3 variants, H3.X and H3.Y. (PMID: 20819935) Wiedemann S.M. … Hake S.B. (J. Cell Biol. 2010) 67

Products for H3.X Gene

Sources for H3.X Gene

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