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Aliases for H3.X Gene

Subcategory (RNA class) for H3.X Gene


Aliases for H3.X Gene

  • Histone Cluster 2, H3d Pseudogene 3
  • SH3PX1 6
  • SNX9 6

External Ids for H3.X Gene

ORGUL Members for H3.X Gene

Summaries for H3.X Gene

GeneCards Summary for H3.X Gene

H3.X (Histone Cluster 2, H3d Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class. Among its related pathways are Clathrin derived vesicle budding and Clathrin derived vesicle budding.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for H3.X Gene

Genomics for H3.X Gene

Genomic Location for H3.X Gene

17,491,361 bp from pter
17,491,769 bp from pter
409 bases
Minus strand

Genomic View for H3.X Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for H3.X Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for H3.X Gene

No data available for Regulatory Elements for H3.X Gene

Proteins for H3.X Gene

Post-translational modifications for H3.X Gene

No Post-translational modifications

No data available for DME Specific Peptides for H3.X Gene

Domains for H3.X Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for H3.X Gene

Function for H3.X Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for H3.X Gene

Localization for H3.X Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for H3.X Gene

Transcripts for H3.X Gene

mRNA/cDNA for H3.X Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for H3.X Gene

No ASD Table

Relevant External Links for H3.X Gene

GeneLoc Exon Structure for

Expression for H3.X Gene

mRNA expression in normal human tissues for H3.X Gene

mRNA differential expression in normal tissues according to GTEx for H3.X Gene

This gene is overexpressed in Testis (33.1) and Whole Blood (12.9).
genes like me logo Genes that share expressions with H3.X: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for H3.X Gene

Orthologs for H3.X Gene

Evolution for H3.X Gene

Gene Tree for H3.X (if available)
Gene Tree for H3.X (if available)

No data available for Orthologs for H3.X Gene

Paralogs for H3.X Gene

No data available for Paralogs for H3.X Gene

Variants for H3.X Gene

Relevant External Links for H3.X Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for H3.X Gene

Disorders for H3.X Gene

No disorders were found for H3.X Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for H3.X Gene

Publications for H3.X Gene

  1. Identification and characterization of two novel primate-specific histone H3 variants, H3.X and H3.Y. (PMID: 20819935) Wiedemann S.M. … Hake S.B. (J. Cell Biol. 2010) 3
  2. A comprehensive view of the epigenetic landscape part I: DNA methylation, passive and active DNA demethylation pathways and histone variants. (PMID: 25362550) Sadakierska-Chudy A. … Filip M. (Neurotox Res 2015) 3

Products for H3.X Gene

Sources for H3.X Gene

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