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Aliases for H2BFXP Gene

Aliases for H2BFXP Gene

  • H2B Histone Family, Member X, Pseudogene 2 3

External Ids for H2BFXP Gene

Previous GeneCards Identifiers for H2BFXP Gene

  • GC0XU900832
  • GC0XP103119
  • GC0XP103231
  • GC0XP092885

Summaries for H2BFXP Gene

GeneCards Summary for H2BFXP Gene

H2BFXP (H2B Histone Family, Member X, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for H2BFXP Gene

Genomics for H2BFXP Gene

Regulatory Elements for H2BFXP Gene

Transcription factor binding sites by QIAGEN in the H2BFXP gene promoter:

Genomic Location for H2BFXP Gene

Start:
103,975,924 bp from pter
End:
103,978,207 bp from pter
Size:
2,284 bases
Orientation:
Plus strand

Genomic View for H2BFXP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for H2BFXP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for H2BFXP Gene

Proteins for H2BFXP Gene

Post-translational modifications for H2BFXP Gene

No Post-translational modifications

No data available for DME Specific Peptides for H2BFXP Gene

Domains for H2BFXP Gene

Gene Families for H2BFXP Gene

HGNC:
  • RIH :Histones / Replication-independent

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with H2BFXP: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for H2BFXP Gene

Function for H2BFXP Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for H2BFXP Gene

Localization for H2BFXP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for H2BFXP Gene

Pathways for H2BFXP Gene

SuperPathways for H2BFXP Gene

No Data Available

Interacting Proteins for H2BFXP Gene

Gene Ontology (GO) - Biological Process for H2BFXP Gene

None

No data available for Pathways by source for H2BFXP Gene

Transcripts for H2BFXP Gene

mRNA/cDNA for H2BFXP Gene

(2) Additional mRNA sequences :

Unigene Clusters for H2BFXP Gene

H2B histone family, member X, pseudogene:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for H2BFXP

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for H2BFXP Gene

No ASD Table

Relevant External Links for H2BFXP Gene

GeneLoc Exon Structure for
H2BFXP
ECgene alternative splicing isoforms for
H2BFXP

Expression for H2BFXP Gene

mRNA expression in normal human tissues for H2BFXP Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for H2BFXP Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (9.3) and Brain - Cerebellum (8.7).

SOURCE GeneReport for Unigene cluster for H2BFXP Gene Hs.496530

genes like me logo Genes that share expressions with H2BFXP: view

In Situ Assay Products

No data available for Protein expression and mRNA Expression by UniProt/SwissProt for H2BFXP Gene

Orthologs for H2BFXP Gene

No data available for Orthologs and Evolution for H2BFXP Gene

Paralogs for H2BFXP Gene

No data available for Paralogs for H2BFXP Gene

Variants for H2BFXP Gene

Sequence variations from dbSNP and Humsavar for H2BFXP Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs562312 -- 103,976,844(+) CAAAC(A/G)AGGCA intron-variant
rs632306 -- 103,978,648(+) GGAAA(C/T)GTAGC downstream-variant-500B
rs1180761 -- 103,974,074(+) AAAAG(G/T)GTTCA upstream-variant-2KB
rs1183000 -- 103,974,301(+) AATGT(A/G)ATTTA upstream-variant-2KB
rs75739981 -- 103,974,393(+) TATAT(A/G)TATAT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for H2BFXP Gene

Variant ID Type Subtype PubMed ID
dgv2459e1 CNV Complex 17122850
nsv469772 CNV Complex 16826518
nsv519626 CNV Gain 19592680
nsv7453 OTHER Inversion 18451855
esv1007027 OTHER Inversion 20482838
nsv208 OTHER Inversion 15895083
dgv2460e1 CNV Complex 17122850
dgv5n1 OTHER Inversion 15895083

Relevant External Links for H2BFXP Gene

HapMap Linkage Disequilibrium report
H2BFXP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for H2BFXP Gene

Disorders for H2BFXP Gene

No disorders were found for H2BFXP Gene.

No data available for UniProtKB/Swiss-Prot for H2BFXP Gene

Publications for H2BFXP Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3

Products for H2BFXP Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate H2BFXP
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for H2BFXP
    • Block miRNA regulation of H2BFXP using miScript Target Protectors

    Sources for H2BFXP Gene

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