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Aliases for H2AFZP1 Gene

Aliases for H2AFZP1 Gene

  • H2A Histone Family Member Z Pseudogene 1 2 3 5
  • H2A Histone Family, Member Z, Pseudogene 2 3
  • H2A Histone Family, Member Z Pseudogene 1 2
  • Histone H2AZ Pseudogene 3
  • H2AFZP 3
  • GT334 3

External Ids for H2AFZP1 Gene

Previous HGNC Symbols for H2AFZP1 Gene

  • H2AFZP

Previous GeneCards Identifiers for H2AFZP1 Gene

  • GC21M044291
  • GC21M045465
  • GC21M030836

Summaries for H2AFZP1 Gene

GeneCards Summary for H2AFZP1 Gene

H2AFZP1 (H2A Histone Family Member Z Pseudogene 1) is a Pseudogene.

Additional gene information for H2AFZP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for H2AFZP1 Gene

Genomics for H2AFZP1 Gene

Regulatory Elements for H2AFZP1 Gene

Enhancers for H2AFZP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21H044050 1 Ensembl ENCODE dbSUPER 0.7 -4.5 -4498 3 GLIS1 ATF7 ZIC2 ATF2 PWP2 TRAPPC10 H2AFZP1 PIR47770
GH21H044020 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +25.8 25793 1 PKNOX1 FOXA2 ATF1 ARID4B TCF12 ATF7 SP3 NCOA1 ZNF592 NFIL3 PWP2 RNU6-859P AGPAT3 TRAPPC10 C21orf2 H2AFZP1
GH21H044064 1.2 FANTOM5 ENCODE dbSUPER 0.4 -18.4 -18374 2 POLR2A MAX ZBTB33 FOXP2 CEBPG CREM EGR2 PWP2 TRAPPC10 PFKL C21orf2 H2AFZP1 PIR47770
GH21H044024 1.5 Ensembl ENCODE dbSUPER 0.3 +21.3 21348 2 HDGF ATF1 ARNT TCF12 ZNF766 ATF7 NCOA1 SMARCB1 ZNF592 SNIP1 PWP2 RRP1B U2AF1 UBE2G2 PFKL TRAPPC10 H2AFZP1
GH21H044015 1.5 Ensembl ENCODE dbSUPER 0.3 +30.2 30174 2 PKNOX1 ATF1 TCF12 ZNF121 ATF7 NCOA1 ZC3H11A SMARCB1 ZNF592 MBD2 PWP2 RNU6-859P AGPAT3 TRAPPC10 H2AFZP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around H2AFZP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for H2AFZP1 Gene

Chromosome:
21
Start:
44,045,967 bp from pter
End:
44,047,146 bp from pter
Size:
1,180 bases
Orientation:
Minus strand

Genomic View for H2AFZP1 Gene

Genes around H2AFZP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
H2AFZP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for H2AFZP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for H2AFZP1 Gene

Proteins for H2AFZP1 Gene

Post-translational modifications for H2AFZP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for H2AFZP1 Gene

Domains & Families for H2AFZP1 Gene

Gene Families for H2AFZP1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with H2AFZP1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for H2AFZP1 Gene

Function for H2AFZP1 Gene

Phenotypes for H2AFZP1 Gene

GenomeRNAi human phenotypes for H2AFZP1:
genes like me logo Genes that share phenotypes with H2AFZP1: view

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for H2AFZP1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for H2AFZP1 Gene

Localization for H2AFZP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for H2AFZP1 Gene

Pathways & Interactions for H2AFZP1 Gene

SuperPathways for H2AFZP1 Gene

No Data Available

Interacting Proteins for H2AFZP1 Gene

Gene Ontology (GO) - Biological Process for H2AFZP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for H2AFZP1 Gene

Drugs & Compounds for H2AFZP1 Gene

No Compound Related Data Available

Transcripts for H2AFZP1 Gene

mRNA/cDNA for H2AFZP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for H2AFZP1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for H2AFZP1 Gene

No ASD Table

Relevant External Links for H2AFZP1 Gene

GeneLoc Exon Structure for
H2AFZP1
ECgene alternative splicing isoforms for
H2AFZP1

Expression for H2AFZP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for H2AFZP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of H2AFZP1 Gene:

H2AFZP1
genes like me logo Genes that share expression patterns with H2AFZP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for H2AFZP1 Gene

Orthologs for H2AFZP1 Gene

Evolution for H2AFZP1 Gene

ENSEMBL:
Gene Tree for H2AFZP1 (if available)
TreeFam:
Gene Tree for H2AFZP1 (if available)

No data available for Orthologs for H2AFZP1 Gene

Paralogs for H2AFZP1 Gene

No data available for Paralogs for H2AFZP1 Gene

Variants for H2AFZP1 Gene

Relevant External Links for H2AFZP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
H2AFZP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for H2AFZP1 Gene

Disorders for H2AFZP1 Gene

No disorders were found for H2AFZP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for H2AFZP1 Gene

Publications for H2AFZP1 Gene

  1. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M … Chromosome 21 mapping and sequencing consortium (Nature 2000) 3 60

Products for H2AFZP1 Gene

Sources for H2AFZP1 Gene

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