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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

GUCY2D Gene

protein-coding   GIFtS: 62
GCID: GC17P007905

guanylate cyclase 2D, membrane (retina-specific)

(Previous name: cone rod dystrophy 5/6 )
(Previous symbols: CORD6, LCA, GUC2D, GUC1A4, CORD5)
 Explore 28 diseases affiliated with
GUCY2D via our new
 Human Malady Compendium 
Biological research products
for GUCY2D
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Guanylate Cyclase 2D, Membrane (Retina-Specific)1 2     Guanylate Cyclase 2D, Retinal2 3
CORD61 2 3 5     Rod Outer Segment Membrane Guanylate Cyclase2 3
GUC2D1 2 3 5     ROS-GC2 3
GUC1A41 2 3     EC 4.6.1.23 8
RETGC-11 2 3     RCD22 5
LCA11 2 5     Cone Rod Dystrophy 5/61
CORD51 2     ROSGC2
CYGD1 2     Retinal Guanylyl Cyclase 12
LCA1 2     RETGC3
ROS-GC11 2     RETGC13
RetGC1     EC 4.6.18

External Ids:    HGNC: 46891   Entrez Gene: 30002   Ensembl: ENSG000001325187   OMIM: 6001795   UniProtKB: Q028463   

Export aliases for GUCY2D gene to outside databases

Previous GC identifers: GC17P008372 GC17P008777 GC17P007848 GC17P008106 GC17P007846


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for GUCY2D:
This gene encodes a retina-specific guanylate cyclase, which is a member of the membrane guanylyl cyclase family. Like
other membrane guanylyl cyclases, this enzyme has a hydrophobic amino-terminal signal sequence followed by a large
extracellular domain, a single membrane spanning domain, a kinase homology domain, and a guanylyl cyclase catalytic
domain. In contrast to other membrane guanylyl cyclases, this enzyme is not activated by natriuretic peptides.
Mutations in this gene result in Leber congenital amaurosis and cone-rod dystrophy-6 diseases. (provided by RefSeq,
Dec 2008)

UniProtKB/Swiss-Prot: GUC2D_HUMAN, Q02846
Function: Probably plays a specific functional role in the rods and/or cones of photoreceptors. It may be the enzyme
involved in the resynthesis of cGMP required for recovery of the dark state after phototransduction




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000017.10  NC_018928.1  NT_010718.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the GUCY2D gene promoter:
         SRF   AML1a   SRF (504 AA)   Lmo2   Pax-2   Olf-1   Pax-2a   PPAR-gamma1   STAT3   PPAR-gamma2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidGUCY2D promoter sequence
   Search SABiosciences Chromatin IP Primers for GUCY2D

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat GUCY2D


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 17p13.1   Ensembl cytogenetic band:  17p13.1   HGNC cytogenetic band: 17p13.1

GUCY2D Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
GUCY2D gene location

GeneLoc information about chromosome 17         GeneLoc Exon Structure

GeneLoc location for GC17P007905:  view genomic region     (about GC identifiers)

Start:
7,905,912 bp from pter      End:
7,923,658 bp from pter
Size:
17,747 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: GUC2D_HUMAN, Q02846 (See protein sequence)
Recommended Name: Retinal guanylyl cyclase 1 precursor  
Size: 1103 amino acids; 120059 Da
Subcellular location: Membrane; Single-pass type I membrane protein
1 PDB 3D structure from and Proteopedia for GUCY2D:
1AWL (3D)    
Secondary accessions: Q6LEA7

Explore the universe of human proteins at neXtProt for GUCY2D: NX_Q02846

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q02846

  • 4/30 DME Specific Peptides for GUCY2D (Q02846) (see all 30)
     ERTEELE  ASRMEST  SEPIEVV  AIRPATK 

    GUCY2D Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_000171.1  
    ENSEMBL proteins: 
     ENSP00000254854  

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    Uscn Proteins for GUCY2D

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005640nuclear outer membrane TAS7777544
    GO:0005886plasma membrane ----
    GO:0005887integral to plasma membrane TAS1356371


    GUCY2D for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    GUCY2D for domains           About GeneDecksing

    5/7 InterPro domains/families (see all 7):
     IPR011009 Kinase-like_dom
     IPR000719 Prot_kinase_cat_dom
     IPR011645 Haem_no_assoc-bd
     IPR001054 A/G_cyclase
     IPR018297 A/G_cyclase_CS

    Graphical View of Domain Structure for InterPro Entry Q02846

    ProtoNet protein and cluster: Q02846

    1 Blocks protein family: IPB001828 Extracellular ligand-binding receptor

    UniProtKB/Swiss-Prot: GUC2D_HUMAN, Q02846
    Similarity: Belongs to the adenylyl cyclase class-4/guanylyl cyclase family
    Similarity: Contains 1 guanylate cyclase domain
    Similarity: Contains 1 protein kinase domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: GUC2D_HUMAN, Q02846
    Function: Probably plays a specific functional role in the rods and/or cones of photoreceptors. It may be the enzyme
    involved in the resynthesis of cGMP required for recovery of the dark state after phototransduction
    Catalytic activity: GTP = 3',5'-cyclic GMP + diphosphate
    Enzyme regulation: Activated by GCAP-1; inhibited by calcium

         Genatlas biochemistry entry for GUCY2D:
    guanylate cyclase 2D,photoreceptor specific,likely homologous to murine Gucy2d,expressed in the retina,in the rod outer
    segment,activated at nanomolar concentrations of Ca2 by Ca2+ binding proteins and involved in
    phosphotransduction,stimulated at micromolar concentrations of Ca2+ by S100 beta and involved in retinal synaptic
    activity

    Enzyme Numbers (IUBMB): EC 4.6.1.21 2 EC 4.6.12

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    Gene Ontology (GO): 5/7 molecular function terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004383guanylate cyclase activity IEA--
    GO:0004672protein kinase activity IEA--
    GO:0004872receptor activity TAS1356371
    GO:0005515protein binding ----
    GO:0005524ATP binding IEA--


    GUCY2D for ontologies           About GeneDecksing


    2 GenomeRNAi human phenotypes for GUCY2D:
     Decreased substrate adherent c  Increased cell spreading 

    Animal Models:
         Mouse knock-out Gucy2etm1Gar for GUCY2D
         2 MGI mutant phenotypes (inferred from 1 allele(MGI details for Gucy2e):
     nervous system  vision/eye 

    GUCY2D for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/10 super-pathways (see all 10About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Visual signal transduction- Rods
    Visual signal transduction- Rods1.00
    Visual signal transduction- Cones0.39
    Phototransduction0.44
    2G-Beta Gamma Signaling
    CRHR Pathway0.44
    Relaxin Pathway0.32
    3Sweet Taste Signaling
    Cellular Effects of Sildenafil0.46
    Sperm Motility0.36
    4Visual Cycle in Retinal Rods
    Visual Cycle in Retinal Rods1.00
    5Signaling in Gap Junctions
    Signaling in Gap Junctions1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    5/9 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for GUCY2D (see all 9)
        Sertoli-Sertoli Cell Junction Dynamics
    Relaxin Pathway
    Intracellular Calcium Signaling
    Visual Cycle in Retinal Rods
    CRHR Pathway

    2 BioSystems Pathways for GUCY2D 
        Visual signal transduction- Rods
    Visual signal transduction- Cones


    3         Kegg Pathways  (Kegg details for GUCY2D):
        Purine metabolism
    Olfactory transduction
    Phototransduction


    GUCY2D for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for GUCY2D

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/83 Interacting proteins for GUCY2D (Q028461, 2, 3 ENSP000002548544) via UniProtKB, MINT, STRING, and/or I2D (see all 83)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    FYNP062411, 2, 3, ENSP000003576564EBI-1756902,EBI-515315 MINT-8111283 I2D: score=3 STRING: ENSP00000357656
    GUCA1AP430803, ENSP000000534694I2D: score=1 STRING: ENSP00000053469
    GUCA1BQ9UMX63, ENSP000002303614I2D: score=1 STRING: ENSP00000230361
    GUCA2BQ166613, ENSP000003616624I2D: score=1 STRING: ENSP00000361662
    S100BP042713, ENSP000002917004I2D: score=1 STRING: ENSP00000291700
    About this table

    Gene Ontology (GO): 4 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006182cGMP biosynthetic process ----
    GO:0007168receptor guanylyl cyclase signaling pathway TAS1356371
    GO:0007601visual perception IEA--
    GO:0035556intracellular signal transduction IEA--


    GUCY2D for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    GUCY2D for compounds           About GeneDecksing

    EMD Millipore small molecules for GUCY2D:
    Small Molecule - inhibitor
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    5 HMDB Compounds for GUCY2D    About this table
    CompoundSynonyms CAS #PubMed Ids
    CalciumCa (see all 2)7440-70-2--
    Cyclic GMP3',5'-cyclic GMP (see all 13)7665-99-8--
    Guanosine triphosphate5'-GTP (see all 10)86-01-1--
    Phosphoric acidacide phosphorique (FRENCH) (see all 20)7664-38-2--
    Pyrophosphate(4-)Diphosphoric acid ion (see all 10)14000-31-8--
    9 Novoseek chemical compound relationships for GUCY2D gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    guanylate 87 81 8672403 (2), 19915996 (2), 10504230 (2), 19111294 (2) (see all 53)
    cgmp 75.6 28 17699662 (3), 12799385 (2), 1356371 (2), 12390029 (1) (see all 15)
    amp-pnp 47.8 5 12799385 (3), 16460036 (1)
    calcium 47.6 92 10196158 (7), 9651312 (4), 7912093 (4), 8662612 (3) (see all 30)
    gtp 19.9 2 11136713 (1)
    vitamin a 19.3 3 18632300 (1), 19753312 (1), 12015276 (1)
    atp 17.6 15 16259948 (3), 8662612 (2), 16460036 (2), 8870679 (2) (see all 6)
    magnesium 0 2 16793776 (2)
    serine 0 1 18161624 (1)

    Search CenterWatch for drugs/clinical trials and news about GUCY2D / GUC2D 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for GUCY2D gene: 
    NM_000180.3  

    Unigene Cluster for GUCY2D:

    Guanylate cyclase 2D, membrane (retina-specific)
    Hs.592109  [show with all ESTs]
    Unigene Representative Sequence: NM_000180
    2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000254854(uc002gjt.2) ENST00000574510

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    Additional cDNA sequence: 

    AK125534.1 DQ426876.1 M92432.1 

    4 DOTS entries:

    DT.97832107  DT.101961149  DT.99950562  DT.91638961 

    7 AceView cDNA sequences:

    CK301185 M92432 NM_000180 BQ188824 BM688787 BM931704 BQ639990 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    GUCY2D expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CTGTCTTCAA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See GUCY2D Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for GUCY2D

    SOURCE GeneReport for Unigene cluster: Hs.592109

    UniProtKB/Swiss-Prot: GUC2D_HUMAN, Q02846
    Tissue specificity: Retina. Localized exclusively in the nuclei and inner segments of the rod and cone photoreceptor
    cells

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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GUCY2D

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for GUCY2D gene from 4/18 species (see all 18)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    lizard
    (Anolis carolinensis)
    Reptilia GUCY2D6
    --
    61(a)
    1 ↔ 1
    GL343400.1(897825-937908)
    zebrafish
    (Danio rerio)
    Actinopterygii gc31 guanylyl cyclase 3 58.12(n)
    54.43(a)
      140426  NM_131866.1  NP_571941.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG97833 receptor guanylate cyclase 53(a)
    (best of 2)
      82C1   --
    worm
    (Caenorhabditis elegans)
    Secernentea gcy-223 Natriuretic peptides receptors, guanylate
    cyclase
    44(a)
    (best of 17)
      V(20812562-20817185)   --


    ENSEMBL Gene Tree for GUCY2D (if available)
    TreeFam Gene Tree for GUCY2D (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for GUCY2D gene
    ADCY52  ADCY22  GUCY2C2  NPR12  GUCY2F2  ADCY82  GUCY1A22  ADCY72  
    ADCY92  GUCY1B32  ADCY62  ADCY12  GUCY1A32  ADCY42  NPR22  ADCY32  
    3 SIMAP similar genes for GUCY2D using alignment to 1 protein entry:     GUC2D_HUMAN:
    GUCY2F    NPR1    NPR2

    GUCY2D for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for GUCY2D
    PGOHUM00000257844


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/420 NCBI SNPs in GUCY2D are shown (see all 420    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 17 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs617497551,2
    Cpathogenic7912849(+) GAAATC/TCCCAG 2 S F mis10--------
    rs289336951,2
    Cpathogenic7918017(+) CGGGAC/G/TCGCAC 3 D E mis11NA 2
    rs617501721,2
    Cpathogenic7918018(+) GGGAGA/C/TGCACG 3 S R C mis10--------
    rs617501731,2
    Cpathogenic7918019(+) GGAGCA/GCACGG 2 H R mis10--------
    rs617501741,2
    Cpathogenic7918022(+) GCGCAC/TGGAGG 2 T M mis10--------
    rs1378538971,2
    Cuntested7912875(+) CTATCC/TGCCCA 2 R C mis11Minor allele frequency- T:0.00NA 4552
    rs617496651,2
    C,F,unknown7906519(+) TCTCCT/GCCGTG 2 /A /S mis14Minor allele frequency- G:0.48NA EA 244
    rs1859202161,2
    --7903996(+) CACCCA/GCGGCT 1 -- us2k10--------
    rs1898077471,2
    --7904097(+) CTCCCA/GAAGTG 1 -- us2k10--------
    rs1835569451,2
    --7904121(+) CGTGAA/GCCACG 1 -- us2k10--------

    HapMap Linkage Disequilibrium report for GUCY2D (7905912 - 7923658 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for GUCY2D: --
    Human Gene Mutation Database (HGMD): GUCY2D

    Locus Specific Mutation Databases (LSDB): GUCY2D

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing GUCY2D
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    GUCY2D for disorders           About GeneDecksing

    OMIM gene information: 600179   
    OMIM disorders: 204000  601777  
    UniProtKB/Swiss-Prot: GUC2D_HUMAN, Q02846
  • Defects in GUCY2D are the cause of Leber congenital amaurosis type 1 (LCA1) [MIM:204000]. LCA designates a
  • clinically and genetically heterogeneous group of childhood retinal degenerations, generally inherited in an autosomal
    recessive manner. Affected infants have little or no retinal photoreceptor function as tested by electroretinography.
    LCA represents the most common genetic cause of congenital visual impairment in infants and children
  • Defects in GUCY2D are the cause of cone-rod dystrophy type 6 (CORD6) [MIM:601777]. CORDs are inherited retinal
  • dystrophies belonging to the group of pigmentary retinopathies. CORDs are characterized by retinal pigment deposits
    visible on fundus examination, predominantly in the macular region, and initial loss of cone photoreceptors followed
    by rod degeneration. This leads to decreased visual acuity and sensitivity in the central visual field, followed by
    loss of peripheral vision. Severe loss of vision occurs earlier than in retinitis pigmentosa

    20/28 diseases for GUCY2D (see all 28):    About MalaCards
    cone-rod dystrophy    cone-rod dystrophy 6    leber congenital amaurosis    cone-rod dystrophy 5
    retinitis    leber congenital amaurosis 1    partial central choroid dystrophy    dengue hemorrhagic fever
    hemorrhagic fever    pigmentary retinopathy    hyperopia    retinitis pigmentosa
    fundus dystrophy    cone dystrophy    retinal degeneration    scotoma
    keratoconus    choroidal dystrophy    coloboma    blindness

    5 diseases from the University of Copenhagen DISEASES database for GUCY2D:
    Leber congenital amaurosis     Retinal degeneration     Fundus dystrophy     Blindness
    Partial central choroid dystrophy

    10 Novoseek disease relationships for GUCY2D gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    lebers congenital amaurosis 97.5 23 12623820 (2), 15123990 (2), 9888789 (2), 8641699 (1) (see all 17)
    cord6 96.1 5 10647719 (2), 11115851 (1), 11952088 (1), 10529237 (1)
    cone-rod dystrophy 95 34 10647719 (2), 11709018 (2), 12596936 (2), 17041576 (2) (see all 22)
    retinitis pigmentosa 77.6 11 16272259 (4), 10527670 (1), 15370538 (1), 18055816 (1) (see all 7)
    retinal degeneration 72.9 4 12623820 (1), 12187427 (1), 20012162 (1), 17699662 (1)
    blindness 58.3 2 16700630 (2)
    retinopathy 58 3 7806240 (1), 11952089 (1)
    keratoconus 38.9 1 19407021 (1)
    hyperopia 29.3 1 15643614 (1)
    vision low 26 1 17525851 (1)

    GeneTests: GUCY2D
    Leber Congenital Amaurosis

    Human Genome Epidemiology (HuGE) Navigator: GUCY2D (6 documents)

    Export disorders for GUCY2D gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for GUCY2D gene, integrated from 9 sources (see all 160):
    (articles sorted by number of sources associating them with GUCY2D)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Molecular cloning of a retina-specific membrane guanylyl cyclase. (PubMed id 1356371)1, 2, 3, 9 Shyjan A.W.... Lowe D.G. (1992)
    2. Identification of GUCY2D gene mutations in CORD5 families and evidence of incomplete penetrance. (PubMed id 12552567)1, 2, 3, 9 Udar N....Small K.W. (2003)
    3. Functional analyses of mutant recessive GUCY2D alleles identified in Leber congenital amaurosis patients: protein domain comparisons and dominant negative effects. (PubMed id 15123990)1, 2, 9 Tucker C.L.... Koenekoop R.K. (2004)
    4. Functional consequences of a rod outer segment membrane guanylate cyclase (ROS-GC1) gene mutation linked with Leber's congenital amaurosis. (PubMed id 9888789)1, 2, 9 Duda T....Sharma R.K. (1999)
    5. Human retinal guanylate cyclase (GUC2D) maps to chromosome 17p13.1. (PubMed id 7806240)1, 2, 9 Oliveira L....Pittler S.J. (1994)
    6. Electroretinographic abnormalities in parents of patients with Leber congenital amaurosis who have heterozygous GUCY2D mutations. (PubMed id 12365911)1, 2, 9 Koenekoop R.K.... Maumenee I. (2002)
    7. Mutations in the retinal guanylate cyclase (RETGC-1) gene in dominant cone-rod dystrophy. (PubMed id 9618177)1, 2, 9 Kelsell R.E.... Hunt D.M. (1998)
    8. Clinical and molecular genetics of Leber's congenital amaurosis: a multicenter study of Italian patients. (PubMed id 17724218)1, 2, 9 Simonelli F....Banfi S. (2007)
    9. Mutational analysis and clinical correlation in Leber congenital amaurosis. (PubMed id 11035546)1, 2, 9 Dharmaraj S.R.... Maumenee I.H. (2000)
    10. Retinal-specific guanylate cyclase gene mutations in Leber's congenital amaurosis. (PubMed id 8944027)1, 2, 9 Perrault I....Kaplan J. (1996)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
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      Query String
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    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 3000 HGNC: 4689 AceView: GUCY2D Ensembl:ENSG00000132518 euGenes: HUgn3000
    ECgene: GUCY2D Kegg: 3000 H-InvDB: GUCY2D

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for GUCY2D Pharmacogenomics, SNPs, Pathways
    Mutations of the GUCY2D genehttp://www.retina-international.org/files/sci-news/gcmut.htm
    GeneReviewshttp://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/GUCY2D

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for GUCY2D gene:
    Search GeneIP for patents involving GUCY2D

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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