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Aliases for GSKIP Gene

Aliases for GSKIP Gene

  • GSK3B Interacting Protein 2 3 5
  • C14orf129 3 4
  • Chromosome 14 Open Reading Frame 129 2
  • GSK3-Beta Interaction Protein 3
  • GSK3beta Interaction Protein 2
  • HSPC210 3

External Ids for GSKIP Gene

Previous HGNC Symbols for GSKIP Gene

  • C14orf129

Previous GeneCards Identifiers for GSKIP Gene

  • GC14P096831

Summaries for GSKIP Gene

Entrez Gene Summary for GSKIP Gene

  • This gene encodes a protein that is involved as a negative regulator of GSK3-beta in the Wnt signaling pathway. The encoded protein may play a role in the retinoic acid signaling pathway by regulating the functional interactions between GSK3-beta, beta-catenin and cyclin D1, and it regulates the beta-catenin/N-cadherin pool. The encoded protein contains a GSK3-beta interacting domain (GID) in its C-terminus, which is similar to the GID of Axin. The protein also contains an evolutionarily conserved RII-binding domain, which facilitates binding with protein kinase-A and GSK3-beta, enabling its role as an A-kinase anchoring protein. Alternatively spliced transcript variants have been observed for this gene. [provided by RefSeq, Dec 2012]

GeneCards Summary for GSKIP Gene

GSKIP (GSK3B Interacting Protein) is a Protein Coding gene.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GSKIP Gene

Genomics for GSKIP Gene

Regulatory Elements for GSKIP Gene

Enhancers for GSKIP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around GSKIP on UCSC Golden Path with GeneCards custom track

Promoters for GSKIP Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around GSKIP on UCSC Golden Path with GeneCards custom track

Genomic Location for GSKIP Gene

Chromosome:
14
Start:
96,363,452 bp from pter
End:
96,387,290 bp from pter
Size:
23,839 bases
Orientation:
Plus strand

Genomic View for GSKIP Gene

Genes around GSKIP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GSKIP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GSKIP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GSKIP Gene

Proteins for GSKIP Gene

  • Protein details for GSKIP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9P0R6-GSKIP_HUMAN
    Recommended name:
    GSK3-beta interaction protein
    Protein Accession:
    Q9P0R6
    Secondary Accessions:
    • B3KSZ0
    • Q9BST1
    • Q9NWK0

    Protein attributes for GSKIP Gene

    Size:
    139 amino acids
    Molecular mass:
    15648 Da
    Quaternary structure:
    • Interacts with GSK3B.
    SequenceCaution:
    • Sequence=AAF36130.1; Type=Frameshift; Positions=132; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for GSKIP Gene

neXtProt entry for GSKIP Gene

Post-translational modifications for GSKIP Gene

No Post-translational modifications

No data available for DME Specific Peptides for GSKIP Gene

Domains & Families for GSKIP Gene

Protein Domains for GSKIP Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for GSKIP Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9P0R6

UniProtKB/Swiss-Prot:

GSKIP_HUMAN :
  • Belongs to the UPF0279 family.
Family:
  • Belongs to the UPF0279 family.
genes like me logo Genes that share domains with GSKIP: view

No data available for Gene Families for GSKIP Gene

Function for GSKIP Gene

genes like me logo Genes that share phenotypes with GSKIP: view

Animal Models for GSKIP Gene

MGI Knock Outs for GSKIP:

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for GSKIP Gene

Localization for GSKIP Gene

Subcellular locations from UniProtKB/Swiss-Prot for GSKIP Gene

Cytoplasm.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for GSKIP Gene COMPARTMENTS Subcellular localization image for GSKIP gene
Compartment Confidence
nucleus 3
cytosol 2
extracellular 2
golgi apparatus 2

Gene Ontology (GO) - Cellular Components for GSKIP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
genes like me logo Genes that share ontologies with GSKIP: view

Pathways & Interactions for GSKIP Gene

SuperPathways for GSKIP Gene

No Data Available

Gene Ontology (GO) - Biological Process for GSKIP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GSKIP Gene

Drugs & Compounds for GSKIP Gene

(1) Drugs for GSKIP Gene - From: DGIdb

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
AT9283 Investigational Pharma inhibitor Aurora kinase/JAK inhibitor, Kinase Inhibitors, Inhibitors of mitosis Aurora kinase inhibitors 0
genes like me logo Genes that share compounds with GSKIP: view

Transcripts for GSKIP Gene

Unigene Clusters for GSKIP Gene

GSK3B interacting protein:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for GSKIP Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b · 4c · 4d ^ 5a · 5b ^ 6a · 6b · 6c · 6d
SP1: - - -
SP2: - -
SP3: -
SP4: -
SP5: - -
SP6: - - - - - -

Relevant External Links for GSKIP Gene

GeneLoc Exon Structure for
GSKIP
ECgene alternative splicing isoforms for
GSKIP

Expression for GSKIP Gene

mRNA expression in normal human tissues for GSKIP Gene

Protein differential expression in normal tissues from HIPED for GSKIP Gene

This gene is overexpressed in Bone (17.3), Colon (7.1), and Rectum (6.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for GSKIP Gene



NURSA nuclear receptor signaling pathways regulating expression of GSKIP Gene:

GSKIP

SOURCE GeneReport for Unigene cluster for GSKIP Gene:

Hs.4104

mRNA Expression by UniProt/SwissProt for GSKIP Gene:

Q9P0R6-GSKIP_HUMAN
Tissue specificity: Detected in heart, brain, placenta, liver, skeletal muscle, kidney, testis, lung and pancreas.
genes like me logo Genes that share expression patterns with GSKIP: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and Protein tissue co-expression partners for GSKIP Gene

Orthologs for GSKIP Gene

This gene was present in the common ancestor of animals.

Orthologs for GSKIP Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia GSKIP 34
  • 89.93 (n)
  • 93.53 (a)
GSKIP 35
  • 94 (a)
OneToOne
dog
(Canis familiaris)
Mammalia GSKIP 34
  • 89.54 (n)
  • 93.43 (a)
GSKIP 35
  • 93 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gskip 34
  • 87.77 (n)
  • 93.53 (a)
Gskip 16
Gskip 35
  • 90 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia C14H14orf129 34
  • 99.52 (n)
  • 100 (a)
C14H14ORF129 35
  • 100 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Gskip 34
  • 87.77 (n)
  • 95.68 (a)
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 81 (a)
OneToMany
-- 35
  • 77 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia GSKIP 35
  • 85 (a)
OneToOne
chicken
(Gallus gallus)
Aves C5H14ORF129 34
  • 75.3 (n)
  • 76.98 (a)
GSKIP 35
  • 77 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia GSKIP 35
  • 84 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia gskip 34
  • 72.18 (n)
  • 73.38 (a)
Str.17150 34
zebrafish
(Danio rerio)
Actinopterygii gskip 34
  • 65.66 (n)
  • 71.43 (a)
wufc74a11 34
gskip 35
  • 64 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG11523 35
  • 25 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea C06A12.3 35
  • 14 (a)
OneToMany
T24H7.3 35
  • 28 (a)
OneToMany
Y43F8B.2 35
  • 13 (a)
OneToMany
Species where no ortholog for GSKIP was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for GSKIP Gene

ENSEMBL:
Gene Tree for GSKIP (if available)
TreeFam:
Gene Tree for GSKIP (if available)

Paralogs for GSKIP Gene

No data available for Paralogs for GSKIP Gene

Variants for GSKIP Gene

Sequence variations from dbSNP and Humsavar for GSKIP Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs1545280 -- 96,385,734(+) TGATA(C/G/T)AAAGC utr-variant-3-prime
rs4006 -- 96,384,774(+) CACAT(C/T)GACCT intron-variant
rs8021984 -- 96,377,253(+) TTTCC(A/G)TCATC intron-variant
rs1838108 -- 96,378,777(+) TCATT(A/T)TGGGT intron-variant
rs7147936 -- 96,381,911(+) agaaa(C/T)aatta intron-variant

Structural Variations from Database of Genomic Variants (DGV) for GSKIP Gene

Variant ID Type Subtype PubMed ID
esv2660133 CNV deletion 23128226
esv28071 CNV loss 19812545
esv3552010 CNV deletion 23714750
esv3635422 CNV loss 21293372
esv3635423 CNV gain 21293372
nsv565649 CNV gain 21841781

Variation tolerance for GSKIP Gene

Residual Variation Intolerance Score: 42.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.10; 2.31% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for GSKIP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GSKIP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for GSKIP Gene

Disorders for GSKIP Gene

Relevant External Links for GSKIP

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
GSKIP

No disorders were found for GSKIP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GSKIP Gene

Publications for GSKIP Gene

  1. GSKIP is homologous to the axin GSK3beta interaction domain and functions as a negative regulator of GSK3beta. (PMID: 16981698) Chou H.-Y. … Hong Y.-R. (Biochemistry 2006) 2 3 4 65
  2. Prediction of the binding mode between GSK3I^ and a peptide derived from GSKIP using molecular dynamics simulation. (PMID: 21328310) Tang X.N. … Yang C.N. (Biopolymers 2011) 2 3 65
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 65
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 65
  5. The DNA sequence and analysis of human chromosome 14. (PMID: 12508121) Heilig R. … Weissenbach J. (Nature 2003) 3 4 65

Products for GSKIP Gene

Sources for GSKIP Gene

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